Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 121
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 121
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 121
               

               Conread position:
               3-390
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               34, 101
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-525
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 158
               

               Conread position:
               3-597
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               3-598
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 550
               

               Conread position:
               3-646
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               3-659
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 352
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 266
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 536
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 132
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 319
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 310
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 382
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 215
               

               Conread position:
               4-525
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               5-476
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               5-614
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 107
               

               Conread position:
               13-326
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               16-328
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               16-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               17-546
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               358
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 533
               

               Conread position:
               17-662
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               18-551
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 356
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 342
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 538
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               19-434
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 357
               

               Conread position:
               19-516
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               363
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               24-655
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               33-358
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               74, 169
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 238
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 341
               

               Conread position:
               34-612
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 503
               

               Conread position:
               34-659
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               38-660
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 64
               

               Conread position:
               82-660
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               407
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               84-366
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               84-524
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 16
               

               Conread position:
               87-661
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               390
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               102-661
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               114-526
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 231
               

               Conread position:
               115-656
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               115-662
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               122-662
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               139-661
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 397
               

               Conread position:
               163-662
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               339
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               194-661
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               296
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 142
               

               Conread position:
               296-661
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               303-661
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               48, 223
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 148
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               378-661
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               409-616
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               69, 124
               

               Conread position:
               524-661
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.