Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-588
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-588
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 178
               

               Conread position:
               3-590
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-612
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               3-616
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               3-649
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 359
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 553
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 219
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 378
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 368
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 107
               

               Conread position:
               4-525
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               345
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               33, 189
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 139
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 370
               

               Conread position:
               5-187
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               32, 119
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               10-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               16-525
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               16-655
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               424
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               16-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               17-422
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               18-487
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               331
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 366
               

               Conread position:
               24-438
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               43-624
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               50-662
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               84-661
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               91-661
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               113-661
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 421
               

               Conread position:
               114-661
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 425
               

               Conread position:
               139-616
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               164-662
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 108
               

               Conread position:
               206-661
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               214-661
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 239
               

               Conread position:
               220-661
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 315
               

               Conread position:
               279-587
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               297-662
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               307-661
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               314-661
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               26, 211
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 153
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               375-661
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               103, 148
               

               Conread position:
               385-612
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               93, 147
               

               Conread position:
               402-661
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 120
               

               Conread position:
               415-661
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               426-661
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               503-661
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.