Cow genome map
| Conread name: | Emb1-C0005196_A24 |
| Conread position: | 2-661 |
| Cow position: | chr19:28580430-28579747 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 3-332 |
| Cow position: | chr19:33527345-33527696 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-462 |
| Cow position: | chr19:40816279-40815791 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 321 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 3-523 |
| Cow position: | chr19:5249506-5248957 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 184 |
| Conread position: | 3-640 |
| Cow position: | chr19:12774348-12775002 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 3-659 |
| Cow position: | chr19:173489-174176 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 377 |
| Conread position: | 3-661 |
| Cow position: | chr19:4386847-4387519 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 163 |
| Conread position: | 3-661 |
| Cow position: | chr19:5730104-5730759 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 3-661 |
| Cow position: | chr19:20105959-20106645 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 3-661 |
| Cow position: | chr19:33874659-33875330 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 188 |
| Conread position: | 3-661 |
| Cow position: | chr19:40851216-40850549 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 3-661 |
| Cow position: | chr19:52150452-52149763 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 4-325 |
| Cow position: | chr19:11521933-11521594 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 4-661 |
| Cow position: | chr19:39391742-39392428 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 406 |
| Conread position: | 4-661 |
| Cow position: | chr19:39667295-39666632 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 209 |
| Conread position: | 5-661 |
| Cow position: | chr19:32204530-32205175 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 130 |
| Conread position: | 5-661 |
| Cow position: | chr19:35384378-35383693 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 10-662 |
| Cow position: | chr19:32140139-32139478 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 428 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 17-438 |
| Cow position: | chr19:50723801-50724243 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 17-661 |
| Cow position: | chr19:773847-774523 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 17-661 |
| Cow position: | chr19:5900264-5899591 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 535 |
| Conread position: | 17-661 |
| Cow position: | chr19:7343315-7343986 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 359 |
| Conread position: | 17-662 |
| Cow position: | chr19:342488-343168 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 435 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 18-661 |
| Cow position: | chr19:892377-891720 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 18-662 |
| Cow position: | chr19:39184293-39183624 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 19-661 |
| Cow position: | chr19:28594798-28595456 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 33-662 |
| Cow position: | chr19:28405435-28404812 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 34-655 |
| Cow position: | chr19:205771-206425 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 351 |
| Conread position: | 35-661 |
| Cow position: | chr19:40886455-40885823 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 262 |
| Conread position: | 82-661 |
| Cow position: | chr19:16319309-16318710 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 82-661 |
| Cow position: | chr19:33942892-33943486 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 135-661 |
| Cow position: | chr19:166749-166211 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 156-655 |
| Cow position: | chr19:23400829-23400337 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 158 |
| Conread position: | 217-610 |
| Cow position: | chr19:16128621-16129033 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 148 |
| Conread position: | 251-646 |
| Cow position: | chr19:28367451-28367849 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 225, 104 |
| Conread position: | 256-661 |
| Cow position: | chr19:1583756-1584173 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 403-661 |
| Cow position: | chr19:43146320-43146576 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 120 |
| Conread position: | 414-662 |
| Cow position: | chr19:1489397-1489152 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 26 |
Show alignments to all cow chromosomes.