Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               2-611
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 542
               

               Conread position:
               2-661
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 192
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-454
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               3-577
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 371
               

               Conread position:
               3-588
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-615
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               3-616
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               3-658
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 325
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 380
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 370
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 259
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 193
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               32, 107
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 143
               

               Conread position:
               6-243
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-661
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               15-327
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               17-505
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               18-356
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               443
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 370
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               19-525
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               340
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               19-606
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               363
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               19-612
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 504
               

               Conread position:
               35-661
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               47-182
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               114-655
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               365
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               158, 18
               

               Conread position:
               114-661
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               118-661
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               152-661
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 195
               

               Conread position:
               194-660
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 24
               

               Conread position:
               221-595
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               38, 146
               

               Conread position:
               232-661
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               234-661
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               306
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               259-588
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               39, 271
               

               Conread position:
               279-661
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 253
               

               Conread position:
               288-661
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               301-662
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               303-662
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               267, 38
               

               Conread position:
               307-661
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               313, 166
               

               Conread position:
               354-661
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               108, 86
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               382-661
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               403-655
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 120
               
Show alignments to all cow chromosomes.