Cow genome map
| Conread name: | Emb1-C0005196_A24 |
| Conread position: | 2-611 |
| Cow position: | chr22:21195357-21194728 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 542 |
| Conread position: | 2-661 |
| Cow position: | chr22:44935104-44935782 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-438 |
| Cow position: | chr22:18815230-18814767 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 3-440 |
| Cow position: | chr22:283936-283514 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 3-454 |
| Cow position: | chr22:36184895-36185367 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-577 |
| Cow position: | chr22:6332845-6333445 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 371 |
| Conread position: | 3-588 |
| Cow position: | chr22:10908703-10908091 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-615 |
| Cow position: | chr22:21035254-21034622 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 3-616 |
| Cow position: | chr22:16202064-16202686 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 3-658 |
| Cow position: | chr22:559572-558893 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 325 |
| Conread position: | 3-661 |
| Cow position: | chr22:290567-289877 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 380 |
| Conread position: | 3-661 |
| Cow position: | chr22:538240-538926 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 3-661 |
| Cow position: | chr22:694757-695439 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr22:1519885-1519212 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 3-661 |
| Cow position: | chr22:18028421-18029090 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 3-661 |
| Cow position: | chr22:20239706-20239018 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 3-661 |
| Cow position: | chr22:30677552-30676893 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 3-661 |
| Cow position: | chr22:31333912-31333230 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 370 |
| Conread position: | 3-661 |
| Cow position: | chr22:34169474-34170155 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 259 |
| Conread position: | 3-661 |
| Cow position: | chr22:36860404-36859728 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 193 |
| Conread position: | 3-661 |
| Cow position: | chr22:39468383-39467695 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 3-661 |
| Cow position: | chr22:42992310-42992991 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 3-661 |
| Cow position: | chr22:44492188-44492869 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 3-662 |
| Cow position: | chr22:3803322-3804002 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 3-662 |
| Cow position: | chr22:44397568-44398251 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 180 |
| Conread position: | 4-661 |
| Cow position: | chr22:1879941-1880625 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 4-661 |
| Cow position: | chr22:23801067-23800423 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 5-289 |
| Cow position: | chr22:40378864-40379149 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 5-661 |
| Cow position: | chr22:5937016-5936350 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 5-661 |
| Cow position: | chr22:15852553-15853240 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 6-243 |
| Cow position: | chr22:36579140-36578882 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 13-661 |
| Cow position: | chr22:44368327-44367661 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 15-327 |
| Cow position: | chr22:8120932-8120609 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 17-505 |
| Cow position: | chr22:12730538-12730027 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 17-661 |
| Cow position: | chr22:13773685-13774335 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 18-356 |
| Cow position: | chr22:6501986-6501625 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 18-661 |
| Cow position: | chr22:326039-325353 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 443 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 18-661 |
| Cow position: | chr22:37292514-37291856 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 18-661 |
| Cow position: | chr22:44348705-44348053 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 370 |
| Conread position: | 18-661 |
| Cow position: | chr22:46585415-46584747 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 19-525 |
| Cow position: | chr22:19243556-19244067 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 340 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 19-606 |
| Cow position: | chr22:14880274-14879693 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 363 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 19-612 |
| Cow position: | chr22:17327305-17326688 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 504 |
| Conread position: | 35-661 |
| Cow position: | chr22:46580549-46579895 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 47-182 |
| Cow position: | chr22:3216977-3216836 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 114-655 |
| Cow position: | chr22:296717-297262 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 365 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 114-661 |
| Cow position: | chr22:35670401-35669850 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 118-661 |
| Cow position: | chr22:3272836-3272250 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 152-661 |
| Cow position: | chr22:13766664-13767184 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 195 |
| Conread position: | 194-660 |
| Cow position: | chr22:41474346-41473886 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 24 |
| Conread position: | 221-595 |
| Cow position: | chr22:870289-869907 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 38, 146 |
| Conread position: | 232-661 |
| Cow position: | chr22:15310561-15310137 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 234-661 |
| Cow position: | chr22:36276959-36277391 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 306 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 259-588 |
| Cow position: | chr22:38960516-38960853 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 271 |
| Conread position: | 279-661 |
| Cow position: | chr22:32283252-32282861 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 21, 253 |
| Conread position: | 288-661 |
| Cow position: | chr22:5313730-5314109 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 301-662 |
| Cow position: | chr22:30653983-30654351 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 303-662 |
| Cow position: | chr22:29037132-29037483 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 267, 38 |
| Conread position: | 307-661 |
| Cow position: | chr22:2563288-2562938 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 313, 166 |
| Conread position: | 354-661 |
| Cow position: | chr22:18605285-18604980 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 370-661 |
| Cow position: | chr22:28783644-28783934 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 370-661 |
| Cow position: | chr22:29499070-29499361 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 382-661 |
| Cow position: | chr22:48274797-48274524 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 403-655 |
| Cow position: | chr22:44459215-44459475 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 403-661 |
| Cow position: | chr22:21336517-21336774 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 120 |
Show alignments to all cow chromosomes.