Cow genome map
Conread name: | Emb1-C0005196_A24 |
Conread position: | 1-275 |
Cow position: | chr23:14945438-14945167 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 190 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 35, 18 |
Conread position: | 1-661 |
Cow position: | chr23:15876436-15875752 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 10 |
Conread position: | 3-215 |
Cow position: | chr23:1957019-1957240 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 149 |
Conread position: | 3-260 |
Cow position: | chr23:30237402-30237676 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 108 |
Conread position: | 3-300 |
Cow position: | chr23:27400656-27400970 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 215 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-321 |
Cow position: | chr23:37716636-37716972 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 222 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 31, 108 |
Conread position: | 3-359 |
Cow position: | chr23:23282361-23282727 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 262 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 34, 123 |
Conread position: | 3-388 |
Cow position: | chr23:11077049-11076644 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 369 |
Conread position: | 3-484 |
Cow position: | chr23:22167805-22168282 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 90 |
Conread position: | 3-615 |
Cow position: | chr23:11779919-11780548 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 28 |
Conread position: | 3-657 |
Cow position: | chr23:4889820-4890496 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 349 |
Conread position: | 3-661 |
Cow position: | chr23:3879951-3879269 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 348 |
Conread position: | 3-661 |
Cow position: | chr23:4818156-4818837 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 288 |
Conread position: | 3-661 |
Cow position: | chr23:15526701-15527397 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 46 |
Conread position: | 3-661 |
Cow position: | chr23:20155079-20154411 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 102 |
Conread position: | 3-661 |
Cow position: | chr23:22146177-22145489 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 121 |
Conread position: | 3-661 |
Cow position: | chr23:36030243-36029566 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 54 |
Conread position: | 3-661 |
Cow position: | chr23:41142096-41141410 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 3-662 |
Cow position: | chr23:5873442-5872754 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 108 |
Conread position: | 4-364 |
Cow position: | chr23:29451217-29450840 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 262 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 34, 108 |
Conread position: | 4-615 |
Cow position: | chr23:31648887-31648262 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 108 |
Conread position: | 4-661 |
Cow position: | chr23:2794120-2793454 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 12 |
Conread position: | 4-661 |
Cow position: | chr23:16498105-16497437 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 427 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 32, 137 |
Conread position: | 5-531 |
Cow position: | chr23:618334-617808 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 105 |
Conread position: | 6-334 |
Cow position: | chr23:19451284-19451615 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 244 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 31, 106 |
Conread position: | 16-385 |
Cow position: | chr23:38581861-38582224 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 249 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 18, 77 |
Conread position: | 16-598 |
Cow position: | chr23:16054925-16055523 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 210 |
Conread position: | 16-661 |
Cow position: | chr23:1022811-1022142 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 8 |
Conread position: | 17-661 |
Cow position: | chr23:11714723-11714049 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 95 |
Conread position: | 18-300 |
Cow position: | chr23:13510770-13511064 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 214 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 19, 95 |
Conread position: | 18-661 |
Cow position: | chr23:15178223-15178880 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 199 |
Conread position: | 18-661 |
Cow position: | chr23:19490692-19491367 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 351 |
Conread position: | 35-661 |
Cow position: | chr23:28218589-28219251 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 82-587 |
Cow position: | chr23:21822058-21821576 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 20 |
Conread position: | 82-661 |
Cow position: | chr23:7314128-7314727 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 20 |
Conread position: | 82-662 |
Cow position: | chr23:948610-948008 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 119-660 |
Cow position: | chr23:4639326-4638782 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 11 |
Conread position: | 130-616 |
Cow position: | chr23:23172052-23172546 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 46 |
Conread position: | 136-661 |
Cow position: | chr23:15218594-15218071 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 54 |
Conread position: | 180-659 |
Cow position: | chr23:31164127-31164616 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 316 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 23, 295 |
Conread position: | 204-661 |
Cow position: | chr23:1957515-1957977 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 307 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 54, 158 |
Conread position: | 207-661 |
Cow position: | chr23:26838170-26838644 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 162 |
Conread position: | 210-661 |
Cow position: | chr23:28304272-28304732 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 302 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 39, 47 |
Conread position: | 238-661 |
Cow position: | chr23:32351381-32350945 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 289 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 24, 298 |
Conread position: | 252-662 |
Cow position: | chr23:15041170-15040754 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 272 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 55, 113 |
Conread position: | 282-661 |
Cow position: | chr23:14961518-14961135 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 254 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 19, 69 |
Conread position: | 296-661 |
Cow position: | chr23:608165-608529 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 251 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 34, 8 |
Conread position: | 360-660 |
Cow position: | chr23:29478727-29479019 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 206 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 11, 127 |
Conread position: | 403-661 |
Cow position: | chr23:1400646-1400392 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 176 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 50, 29 |
Show alignments to all cow chromosomes.