Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 1-275
Cow position: chr23:14945438-14945167 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 18

Conread position: 1-661
Cow position: chr23:15876436-15875752 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 3-215
Cow position: chr23:1957019-1957240 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 149

Conread position: 3-260
Cow position: chr23:30237402-30237676 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 3-300
Cow position: chr23:27400656-27400970 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 3-321
Cow position: chr23:37716636-37716972 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 108

Conread position: 3-359
Cow position: chr23:23282361-23282727 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 123

Conread position: 3-388
Cow position: chr23:11077049-11076644 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 369

Conread position: 3-484
Cow position: chr23:22167805-22168282 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 90

Conread position: 3-615
Cow position: chr23:11779919-11780548 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 28

Conread position: 3-657
Cow position: chr23:4889820-4890496 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 349

Conread position: 3-661
Cow position: chr23:3879951-3879269 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 348

Conread position: 3-661
Cow position: chr23:4818156-4818837 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 288

Conread position: 3-661
Cow position: chr23:15526701-15527397 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 3-661
Cow position: chr23:20155079-20154411 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 3-661
Cow position: chr23:22146177-22145489 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 121

Conread position: 3-661
Cow position: chr23:36030243-36029566 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 3-661
Cow position: chr23:41142096-41141410 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 3-662
Cow position: chr23:5873442-5872754 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 4-364
Cow position: chr23:29451217-29450840 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 108

Conread position: 4-615
Cow position: chr23:31648887-31648262 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 108

Conread position: 4-661
Cow position: chr23:2794120-2793454 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 12

Conread position: 4-661
Cow position: chr23:16498105-16497437 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 427
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 32, 137

Conread position: 5-531
Cow position: chr23:618334-617808 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 105

Conread position: 6-334
Cow position: chr23:19451284-19451615 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 106

Conread position: 16-385
Cow position: chr23:38581861-38582224 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 77

Conread position: 16-598
Cow position: chr23:16054925-16055523 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 210

Conread position: 16-661
Cow position: chr23:1022811-1022142 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 17-661
Cow position: chr23:11714723-11714049 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 18-300
Cow position: chr23:13510770-13511064 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 95

Conread position: 18-661
Cow position: chr23:15178223-15178880 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 199

Conread position: 18-661
Cow position: chr23:19490692-19491367 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 351

Conread position: 35-661
Cow position: chr23:28218589-28219251 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 82-587
Cow position: chr23:21822058-21821576 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 20

Conread position: 82-661
Cow position: chr23:7314128-7314727 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 82-662
Cow position: chr23:948610-948008 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 119-660
Cow position: chr23:4639326-4638782 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 11

Conread position: 130-616
Cow position: chr23:23172052-23172546 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 136-661
Cow position: chr23:15218594-15218071 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 54

Conread position: 180-659
Cow position: chr23:31164127-31164616 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 316
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 295

Conread position: 204-661
Cow position: chr23:1957515-1957977 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 307
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 158

Conread position: 207-661
Cow position: chr23:26838170-26838644 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 210-661
Cow position: chr23:28304272-28304732 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 302
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 39, 47

Conread position: 238-661
Cow position: chr23:32351381-32350945 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 298

Conread position: 252-662
Cow position: chr23:15041170-15040754 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 272
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 113

Conread position: 282-661
Cow position: chr23:14961518-14961135 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 19, 69

Conread position: 296-661
Cow position: chr23:608165-608529 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 8

Conread position: 360-660
Cow position: chr23:29478727-29479019 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 127

Conread position: 403-661
Cow position: chr23:1400646-1400392 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 29

Show alignments to all cow chromosomes.