Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               1-661
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 149
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               3-300
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               3-359
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 369
               

               Conread position:
               3-484
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               3-615
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 28
               

               Conread position:
               3-657
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 349
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 348
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 288
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 121
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               4-615
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               427
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               32, 137
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               6-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               16-385
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               16-598
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 210
               

               Conread position:
               16-661
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               18-300
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 199
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 351
               

               Conread position:
               35-661
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               82-587
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               397, 20
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               82-662
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               119-660
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               130-616
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               136-661
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 54
               

               Conread position:
               180-659
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 295
               

               Conread position:
               204-661
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               307
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               207-661
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 162
               

               Conread position:
               210-661
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               302
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               238-661
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               24, 298
               

               Conread position:
               252-662
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 113
               

               Conread position:
               282-661
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               296-661
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               360-660
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 29
               
Show alignments to all cow chromosomes.