Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               2-566
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               377
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-404
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               3-428
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               327
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               3-653
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               428
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               3-659
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 383
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 371
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               420
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 160
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               456
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 377
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               430
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 371
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 219
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 359
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 221
               

               Conread position:
               5-604
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               5-656
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               5-659
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               6-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 146
               

               Conread position:
               11-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               18-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               18-438
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               18-659
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               19-662
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               33-345
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               34-661
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               42-607
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               48-662
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               392
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               82-294
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               82-635
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               368
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               382
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               119-661
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 418
               

               Conread position:
               119-661
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               121-615
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               133-661
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 15
               

               Conread position:
               165-661
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 185
               

               Conread position:
               219-527
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               244-661
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 292
               

               Conread position:
               259-526
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               266-659
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               180, 79
               

               Conread position:
               283-661
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               297-661
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               377-661
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               79, 129
               

               Conread position:
               426-661
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               429-661
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               431-657
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               432-661
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               438-662
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               180, 52
               
Show alignments to all cow chromosomes.