Cow genome map
| Conread name: | Emb1-C0005196_A24 |
| Conread position: | 3-313 |
| Cow position: | chr27:25331952-25331634 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 3-471 |
| Cow position: | chr27:19259833-19260330 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 3-615 |
| Cow position: | chr27:13898458-13899085 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 3-661 |
| Cow position: | chr27:1210492-1211178 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 3-661 |
| Cow position: | chr27:1677446-1676751 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 3-661 |
| Cow position: | chr27:3234399-3233701 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr27:4980509-4981191 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 3-661 |
| Cow position: | chr27:8735321-8735992 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 269 |
| Conread position: | 3-661 |
| Cow position: | chr27:9330871-9331563 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 3-661 |
| Cow position: | chr27:15636210-15635521 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr27:27664137-27664814 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 366 |
| Conread position: | 3-662 |
| Cow position: | chr27:15274927-15274248 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 393 |
| Conread position: | 3-662 |
| Cow position: | chr27:16033269-16032581 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 3-662 |
| Cow position: | chr27:26326211-26326884 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 4-662 |
| Cow position: | chr27:9992062-9991393 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 190 |
| Conread position: | 5-202 |
| Cow position: | chr27:6160861-6160648 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 15-661 |
| Cow position: | chr27:25084727-25085382 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 16-661 |
| Cow position: | chr27:26554249-26553623 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 17-661 |
| Cow position: | chr27:25803542-25802873 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 82-299 |
| Cow position: | chr27:16425954-16426173 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 82-659 |
| Cow position: | chr27:798344-797747 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 114-441 |
| Cow position: | chr27:8589982-8590302 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 119-661 |
| Cow position: | chr27:12748301-12748859 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 243 |
| Conread position: | 119-661 |
| Cow position: | chr27:28079687-28080229 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 222 |
| Conread position: | 152-661 |
| Cow position: | chr27:19524853-19525368 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 197 |
| Conread position: | 191-661 |
| Cow position: | chr27:8199146-8199630 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 170 |
| Conread position: | 201-661 |
| Cow position: | chr27:27195005-27194534 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 206-526 |
| Cow position: | chr27:21286192-21285862 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 218-518 |
| Cow position: | chr27:6160503-6160188 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 154 |
| Conread position: | 256-662 |
| Cow position: | chr27:25035003-25034603 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 361-661 |
| Cow position: | chr27:15373360-15373666 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 370-661 |
| Cow position: | chr27:11486787-11487088 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 370-661 |
| Cow position: | chr27:15035580-15035287 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 108, 152 |
Show alignments to all cow chromosomes.