Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               2-655
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 53
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-510
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               3-518
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               360
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 166
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               3-611
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 546
               

               Conread position:
               3-616
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-645
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 165
               

               Conread position:
               3-655
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               3-659
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 378
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 368
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 178
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 379
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 149
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               439
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 204
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 368
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 555
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 451
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 354
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               446
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               4-211
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-260
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               4-476
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               4-526
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 182
               

               Conread position:
               4-615
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 456
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               5-660
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               16-662
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 107
               

               Conread position:
               17-662
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 360
               

               Conread position:
               18-300
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               18-612
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 343
               

               Conread position:
               18-659
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               426
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 310
               

               Conread position:
               19-389
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 357
               

               Conread position:
               19-661
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               19-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 355
               

               Conread position:
               19-661
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               419
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               20-438
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 343
               

               Conread position:
               32-661
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 250
               

               Conread position:
               33-588
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 513
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               82-524
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               84-660
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               94-661
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               114-621
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 62
               

               Conread position:
               114-661
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 250
               

               Conread position:
               119-657
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 84
               

               Conread position:
               122-328
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               122-661
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               130-658
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 40
               

               Conread position:
               148-661
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 44
               

               Conread position:
               152-649
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 131
               

               Conread position:
               165-654
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               165-660
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               180-660
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               318
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               34, 165
               

               Conread position:
               206-661
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               220-661
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 134
               

               Conread position:
               256-661
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               265-662
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               275-661
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               289-610
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               303-661
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               358-661
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               370-615
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               111, 165
               

               Conread position:
               370-659
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 162
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               371-661
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               108, 161
               

               Conread position:
               371-661
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               375-649
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               377-661
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               101, 145
               

               Conread position:
               378-661
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 145
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 120
               

               Conread position:
               405-661
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               424-662
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 109
               
Show alignments to all cow chromosomes.