Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 1-661
Cow position:
Alignm length: 692
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 66

Conread position: 3-438
Cow position:
Alignm length: 467
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 121

Conread position: 3-445
Cow position:
Alignm length: 463
Alignm identity: 305
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 108

Conread position: 3-586
Cow position:
Alignm length: 622
Alignm identity: 391
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 191

Conread position: 3-616
Cow position:
Alignm length: 623
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 90

Conread position: 3-640
Cow position:
Alignm length: 670
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 337

Conread position: 3-659
Cow position:
Alignm length: 685
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 684
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 379

Conread position: 3-661
Cow position:
Alignm length: 696
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 3-661
Cow position:
Alignm length: 683
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 3-661
Cow position:
Alignm length: 686
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 51

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 211

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 111

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 544

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 686
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 229

Conread position: 3-661
Cow position:
Alignm length: 681
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 92

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 216

Conread position: 3-661
Cow position:
Alignm length: 669
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 91

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 368

Conread position: 3-661
Cow position:
Alignm length: 681
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 692
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 212

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 157

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 65

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 361

Conread position: 3-662
Cow position:
Alignm length: 683
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 4-484
Cow position:
Alignm length: 515
Alignm identity: 338
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 363

Conread position: 4-524
Cow position:
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 546

Conread position: 4-659
Cow position:
Alignm length: 698
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 557

Conread position: 4-661
Cow position:
Alignm length: 693
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 12

Conread position: 4-661
Cow position:
Alignm length: 675
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 5-299
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 47

Conread position: 5-655
Cow position:
Alignm length: 676
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 6-242
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 121

Conread position: 11-661
Cow position:
Alignm length: 674
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 17-285
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 109

Conread position: 18-394
Cow position:
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 186

Conread position: 18-661
Cow position:
Alignm length: 662
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 92

Conread position: 20-655
Cow position:
Alignm length: 662
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 182

Conread position: 33-659
Cow position:
Alignm length: 661
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 76

Conread position: 82-661
Cow position:
Alignm length: 603
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 82-661
Cow position:
Alignm length: 607
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 114-616
Cow position:
Alignm length: 511
Alignm identity: 330
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 18

Conread position: 115-652
Cow position:
Alignm length: 554
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 164

Conread position: 119-661
Cow position:
Alignm length: 558
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 51

Conread position: 119-661
Cow position:
Alignm length: 563
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 122-662
Cow position:
Alignm length: 562
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 124-661
Cow position:
Alignm length: 563
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 130-661
Cow position:
Alignm length: 546
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 136

Conread position: 130-661
Cow position:
Alignm length: 565
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 421

Conread position: 140-661
Cow position:
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 397

Conread position: 149-653
Cow position:
Alignm length: 524
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 389

Conread position: 152-661
Cow position:
Alignm length: 528
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 79

Conread position: 164-661
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 53

Conread position: 178-616
Cow position:
Alignm length: 454
Alignm identity: 296
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 357

Conread position: 183-661
Cow position:
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 176

Conread position: 194-661
Cow position:
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 12

Conread position: 199-654
Cow position:
Alignm length: 465
Alignm identity: 296
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 18

Conread position: 206-655
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 220-661
Cow position:
Alignm length: 460
Alignm identity: 290
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 310

Conread position: 288-661
Cow position:
Alignm length: 378
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 52

Conread position: 296-661
Cow position:
Alignm length: 374
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 8

Conread position: 298-645
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 26

Conread position: 310-661
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 216

Conread position: 313-588
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 165, 42

Conread position: 320-649
Cow position:
Alignm length: 335
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 36

Conread position: 355-661
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 170

Conread position: 364-662
Cow position:
Alignm length: 300
Alignm identity: 195
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 113

Conread position: 376-616
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 146

Conread position: 379-645
Cow position:
Alignm length: 272
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 154

Conread position: 406-662
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 117

Conread position: 416-661
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 430-662
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 92

Conread position: 450-661
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 73

Conread position: 458-661
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 65

Show alignments to all cow chromosomes.