Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 1-662
Cow position:
Alignm length: 697
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 3-203
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 108

Conread position: 3-260
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 3-328
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 170

Conread position: 3-361
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 108

Conread position: 3-400
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 13

Conread position: 3-473
Cow position:
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 3-602
Cow position:
Alignm length: 633
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-645
Cow position:
Alignm length: 674
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 3-659
Cow position:
Alignm length: 690
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 373

Conread position: 3-659
Cow position:
Alignm length: 693
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-660
Cow position:
Alignm length: 678
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 286

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 3-661
Cow position:
Alignm length: 696
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 701
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 118

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 685
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position:
Alignm length: 698
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 555

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 698
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 681
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 202

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 108

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 168

Conread position: 3-661
Cow position:
Alignm length: 680
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 549

Conread position: 3-661
Cow position:
Alignm length: 701
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 258

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 324

Conread position: 3-661
Cow position:
Alignm length: 682
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 104

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 110

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 375

Conread position: 3-662
Cow position:
Alignm length: 699
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 4-224
Cow position:
Alignm length: 238
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 67

Conread position: 7-245
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 11-517
Cow position:
Alignm length: 515
Alignm identity: 339
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 62

Conread position: 16-661
Cow position:
Alignm length: 680
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 18-661
Cow position:
Alignm length: 663
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 348

Conread position: 18-661
Cow position:
Alignm length: 684
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 19-661
Cow position:
Alignm length: 668
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 93

Conread position: 20-661
Cow position:
Alignm length: 688
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 168

Conread position: 33-428
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 34-661
Cow position:
Alignm length: 652
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 31

Conread position: 82-622
Cow position:
Alignm length: 571
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 82-649
Cow position:
Alignm length: 586
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 82-661
Cow position:
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 82-661
Cow position:
Alignm length: 588
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 18

Conread position: 120-602
Cow position:
Alignm length: 494
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 122-645
Cow position:
Alignm length: 550
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 225

Conread position: 130-661
Cow position:
Alignm length: 546
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 403

Conread position: 133-384
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 68

Conread position: 139-659
Cow position:
Alignm length: 535
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 348

Conread position: 165-661
Cow position:
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 289

Conread position: 174-604
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 207-661
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 177

Conread position: 207-661
Cow position:
Alignm length: 474
Alignm identity: 310
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 154

Conread position: 219-661
Cow position:
Alignm length: 460
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 317

Conread position: 239-611
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 297

Conread position: 242-661
Cow position:
Alignm length: 436
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 293

Conread position: 262-661
Cow position:
Alignm length: 414
Alignm identity: 273
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 271

Conread position: 267-661
Cow position:
Alignm length: 408
Alignm identity: 265
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 146

Conread position: 303-661
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 27, 231

Conread position: 304-616
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 222

Conread position: 358-661
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 136

Conread position: 370-615
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 152

Conread position: 371-603
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 127

Conread position: 403-615
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 120

Conread position: 403-661
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 23

Conread position: 403-661
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 119

Conread position: 435-661
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 88

Show alignments to all cow chromosomes.