Cow genome map
| Conread name: | Emb1-C0005196_A24 | 
| Conread position: | 2-350 | 
| Cow position: | chr6:64717129-64717498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 35, 14 | 
| Conread position: | 2-662 | 
| Cow position: | chr6:8760191-8759502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 124 | 
| Conread position: | 3-201 | 
| Cow position: | chr6:2577045-2577256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 31, 108 | 
| Conread position: | 3-298 | 
| Cow position: | chr6:29312606-29312924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 34, 215 | 
| Conread position: | 3-300 | 
| Cow position: | chr6:69391416-69391102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 34, 151 | 
| Conread position: | 3-318 | 
| Cow position: | chr6:3784872-3785209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 34, 121 | 
| Conread position: | 3-328 | 
| Cow position: | chr6:27471684-27472029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 34, 199 | 
| Conread position: | 3-417 | 
| Cow position: | chr6:25360149-25360586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 29, 108 | 
| Conread position: | 3-476 | 
| Cow position: | chr6:28134022-28134513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 28 | 
| Conread position: | 3-604 | 
| Cow position: | chr6:2375792-2376405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 109 | 
| Conread position: | 3-653 | 
| Cow position: | chr6:10250502-10249825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 686 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 3-653 | 
| Cow position: | chr6:39333764-39333088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 686 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 123 | 
| Conread position: | 3-655 | 
| Cow position: | chr6:65842720-65843399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 51 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:50501-49816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 122 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:330360-329676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 694 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 68 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:914738-915423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 365 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:1535471-1534792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 109 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:1821508-1820839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 109 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:2877582-2876895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 52 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:5948678-5947988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 697 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 109 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:12665213-12664531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 46 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:26669758-26669073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 694 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 10 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:28104755-28104074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 217 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:28187718-28187049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 686 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 109 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:28490464-28489780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 123 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:30273790-30273104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 548 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:34891019-34890341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 122 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:39910439-39911118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 429 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:40276191-40276872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 108 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:40326520-40327207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 51 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:40379529-40378842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 109 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:40553469-40552793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 191 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:40866219-40865537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 445 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:43792467-43791793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 505 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:44149452-44148759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 68 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:51731188-51731867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 11 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:55542159-55541470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 700 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 128 | 
| Conread position: | 3-661 | 
| Cow position: | chr6:58065842-58066505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 109 | 
| Conread position: | 4-221 | 
| Cow position: | chr6:17244307-17244076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 33, 108 | 
| Conread position: | 4-260 | 
| Cow position: | chr6:48579882-48579613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 33, 136 | 
| Conread position: | 4-660 | 
| Cow position: | chr6:7178183-7177505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 61 | 
| Conread position: | 4-661 | 
| Cow position: | chr6:52694127-52694815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 696 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 71 | 
| Conread position: | 4-662 | 
| Cow position: | chr6:59617221-59617871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 27 | 
| Conread position: | 5-661 | 
| Cow position: | chr6:7140236-7139551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 120 | 
| Conread position: | 5-661 | 
| Cow position: | chr6:15478280-15478959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 120 | 
| Conread position: | 5-662 | 
| Cow position: | chr6:1382213-1381554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 169 | 
| Conread position: | 10-661 | 
| Cow position: | chr6:43618833-43619513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 686 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 205 | 
| Conread position: | 11-485 | 
| Cow position: | chr6:7834629-7835101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 82 | 
| Conread position: | 11-661 | 
| Cow position: | chr6:66546600-66547262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 113 | 
| Conread position: | 16-661 | 
| Cow position: | chr6:10609991-10610632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 111 | 
| Conread position: | 17-298 | 
| Cow position: | chr6:17597189-17596891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 20, 189 | 
| Conread position: | 17-661 | 
| Cow position: | chr6:45587067-45587737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 95 | 
| Conread position: | 18-603 | 
| Cow position: | chr6:47042097-47041475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 345 | 
| Conread position: | 18-659 | 
| Cow position: | chr6:21973790-21974455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 442 | 
| Conread position: | 18-661 | 
| Cow position: | chr6:703334-704001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 353 | 
| Conread position: | 18-661 | 
| Cow position: | chr6:3888386-3887727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 178 | 
| Conread position: | 18-661 | 
| Cow position: | chr6:27528877-27528230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 178 | 
| Conread position: | 18-661 | 
| Cow position: | chr6:41228565-41229233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 196 | 
| Conread position: | 18-661 | 
| Cow position: | chr6:51715647-51716322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 31 | 
| Conread position: | 18-662 | 
| Cow position: | chr6:35875592-35874923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 357 | 
| Conread position: | 19-652 | 
| Cow position: | chr6:15926446-15925786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 179 | 
| Conread position: | 31-662 | 
| Cow position: | chr6:28276962-28277562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 191, 33 | 
| Conread position: | 34-661 | 
| Cow position: | chr6:3487289-3486635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 331 | 
| Conread position: | 36-261 | 
| Cow position: | chr6:87783-88017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 46, 73 | 
| Conread position: | 82-659 | 
| Cow position: | chr6:21835980-21835412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 20 | 
| Conread position: | 82-661 | 
| Cow position: | chr6:11723981-11723410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 20 | 
| Conread position: | 82-661 | 
| Cow position: | chr6:28703520-28702920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 20 | 
| Conread position: | 101-298 | 
| Cow position: | chr6:30677074-30676876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 41, 92 | 
| Conread position: | 114-661 | 
| Cow position: | chr6:3571815-3572384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 255 | 
| Conread position: | 114-662 | 
| Cow position: | chr6:44001896-44002461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 253 | 
| Conread position: | 115-660 | 
| Cow position: | chr6:3150460-3151024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 62 | 
| Conread position: | 121-661 | 
| Cow position: | chr6:8203427-8203984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 238 | 
| Conread position: | 121-661 | 
| Cow position: | chr6:13848310-13848856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 41, 14 | 
| Conread position: | 123-661 | 
| Cow position: | chr6:16591213-16591746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 77 | 
| Conread position: | 130-299 | 
| Cow position: | chr6:64790574-64790748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 136-485 | 
| Cow position: | chr6:31301575-31301928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 72, 29 | 
| Conread position: | 165-638 | 
| Cow position: | chr6:16598894-16599385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 33, 197 | 
| Conread position: | 171-659 | 
| Cow position: | chr6:5749211-5749712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 28 | 
| Conread position: | 172-525 | 
| Cow position: | chr6:32072452-32072106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 40, 16 | 
| Conread position: | 174-595 | 
| Cow position: | chr6:6185546-6185964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 83, 43 | 
| Conread position: | 206-661 | 
| Cow position: | chr6:184219-183754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 56, 32 | 
| Conread position: | 206-662 | 
| Cow position: | chr6:24240729-24241195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 327 | 
| Conread position: | 232-661 | 
| Cow position: | chr6:36528560-36528987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 79 | 
| Conread position: | 242-635 | 
| Cow position: | chr6:38206663-38207047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 14, 78 | 
| Conread position: | 280-661 | 
| Cow position: | chr6:69143973-69144355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 16, 67 | 
| Conread position: | 284-661 | 
| Cow position: | chr6:28475138-28475510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 24 | 
| Conread position: | 288-661 | 
| Cow position: | chr6:58028141-58028509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 79, 23 | 
| Conread position: | 288-661 | 
| Cow position: | chr6:64717742-64718108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 23, 43 | 
| Conread position: | 296-661 | 
| Cow position: | chr6:17596873-17596506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 34, 8 | 
| Conread position: | 312-661 | 
| Cow position: | chr6:17243854-17243511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 14, 27 | 
| Conread position: | 313-635 | 
| Cow position: | chr6:16672754-16673068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 165, 38 | 
| Conread position: | 370-661 | 
| Cow position: | chr6:14390427-14390718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 108, 153 | 
| Conread position: | 378-660 | 
| Cow position: | chr6:17047847-17048129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 100, 145 | 
| Conread position: | 433-661 | 
| Cow position: | chr6:28642977-28642749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 46, 90 | 
| Conread position: | 456-659 | 
| Cow position: | chr6:53543681-53543884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 22, 66 | 
Show alignments to all cow chromosomes.
