Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 3-239
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 3-293
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 34, 70

Conread position: 3-326
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 110

Conread position: 3-374
Cow position:
Alignm length: 380
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 72

Conread position: 3-394
Cow position:
Alignm length: 419
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 212

Conread position: 3-438
Cow position:
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 196

Conread position: 3-484
Cow position:
Alignm length: 509
Alignm identity: 333
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 196

Conread position: 3-485
Cow position:
Alignm length: 506
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 239

Conread position: 3-545
Cow position:
Alignm length: 570
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 114

Conread position: 3-588
Cow position:
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 194

Conread position: 3-600
Cow position:
Alignm length: 627
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 3-616
Cow position:
Alignm length: 648
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 217

Conread position: 3-645
Cow position:
Alignm length: 673
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 3-655
Cow position:
Alignm length: 679
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 208

Conread position: 3-659
Cow position:
Alignm length: 691
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 371

Conread position: 3-659
Cow position:
Alignm length: 700
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 257

Conread position: 3-659
Cow position:
Alignm length: 687
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 208

Conread position: 3-660
Cow position:
Alignm length: 679
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 3-660
Cow position:
Alignm length: 680
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 113

Conread position: 3-661
Cow position:
Alignm length: 701
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 121

Conread position: 3-661
Cow position:
Alignm length: 684
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 199

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 224

Conread position: 3-661
Cow position:
Alignm length: 677
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 137

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 354

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 438
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 34, 422

Conread position: 3-661
Cow position:
Alignm length: 685
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 90

Conread position: 3-661
Cow position:
Alignm length: 692
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 219

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 109

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 685
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 550

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 686
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 3-662
Cow position:
Alignm length: 684
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 4-260
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 33, 150

Conread position: 4-524
Cow position:
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 84

Conread position: 4-659
Cow position:
Alignm length: 683
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 4-662
Cow position:
Alignm length: 696
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 285

Conread position: 5-261
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 120

Conread position: 5-299
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 191

Conread position: 5-484
Cow position:
Alignm length: 512
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 5-524
Cow position:
Alignm length: 535
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 5-524
Cow position:
Alignm length: 536
Alignm identity: 351
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 106

Conread position: 5-661
Cow position:
Alignm length: 690
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 173

Conread position: 15-662
Cow position:
Alignm length: 668
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 168

Conread position: 16-297
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 95

Conread position: 16-525
Cow position:
Alignm length: 537
Alignm identity: 349
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 57

Conread position: 16-616
Cow position:
Alignm length: 635
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 16-661
Cow position:
Alignm length: 680
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 536

Conread position: 17-657
Cow position:
Alignm length: 675
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 23

Conread position: 18-374
Cow position:
Alignm length: 386
Alignm identity: 265
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 17, 172

Conread position: 18-661
Cow position:
Alignm length: 678
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 354

Conread position: 18-661
Cow position:
Alignm length: 679
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 94

Conread position: 19-660
Cow position:
Alignm length: 677
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 105

Conread position: 19-661
Cow position:
Alignm length: 680
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 21-661
Cow position:
Alignm length: 672
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 91

Conread position: 32-654
Cow position:
Alignm length: 652
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 78

Conread position: 33-661
Cow position:
Alignm length: 655
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 39

Conread position: 33-661
Cow position:
Alignm length: 654
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 153

Conread position: 33-661
Cow position:
Alignm length: 665
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 28

Conread position: 36-328
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 73

Conread position: 43-661
Cow position:
Alignm length: 655
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 512

Conread position: 79-363
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 5

Conread position: 81-588
Cow position:
Alignm length: 531
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 82-267
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 19

Conread position: 82-390
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 33

Conread position: 82-484
Cow position:
Alignm length: 424
Alignm identity: 273
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 105

Conread position: 82-509
Cow position:
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 33

Conread position: 82-661
Cow position:
Alignm length: 595
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 82-661
Cow position:
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 82-661
Cow position:
Alignm length: 593
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 84-359
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 44

Conread position: 85-661
Cow position:
Alignm length: 604
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 89-202
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 122-661
Cow position:
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 287

Conread position: 136-661
Cow position:
Alignm length: 548
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 63

Conread position: 165-661
Cow position:
Alignm length: 517
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 183

Conread position: 168-661
Cow position:
Alignm length: 509
Alignm identity: 329
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 8

Conread position: 196-661
Cow position:
Alignm length: 484
Alignm identity: 315
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 37

Conread position: 206-662
Cow position:
Alignm length: 483
Alignm identity: 320
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 247

Conread position: 209-607
Cow position:
Alignm length: 417
Alignm identity: 273
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 29

Conread position: 213-616
Cow position:
Alignm length: 419
Alignm identity: 277
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 323

Conread position: 214-661
Cow position:
Alignm length: 465
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 217-655
Cow position:
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 233-661
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 299

Conread position: 236-662
Cow position:
Alignm length: 439
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 27

Conread position: 267-661
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 100

Conread position: 288-651
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 196

Conread position: 288-655
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 61

Conread position: 288-661
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 290

Conread position: 294-661
Cow position:
Alignm length: 377
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 73, 10

Conread position: 303-616
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 223

Conread position: 305-616
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 185

Conread position: 307-659
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 171, 62

Conread position: 349-661
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 74

Conread position: 366-661
Cow position:
Alignm length: 301
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 87

Conread position: 378-661
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 146

Conread position: 385-616
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 138

Conread position: 397-662
Cow position:
Alignm length: 273
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 35

Conread position: 403-661
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 129

Conread position: 403-661
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 120

Conread position: 403-661
Cow position:
Alignm length: 260
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 206, 70

Conread position: 405-661
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 117

Conread position: 415-661
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 108

Conread position: 429-661
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 6

Conread position: 450-661
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 73

Show alignments to all cow chromosomes.