Cow genome map
Conread name: | Emb1-C0005196_A24 |
Conread position: | 1-485 |
Cow position: | chr9:24980891-24980394 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 327 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 35, 18 |
Conread position: | 1-616 |
Cow position: | chr9:50698336-50698962 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 24 |
Conread position: | 2-445 |
Cow position: | chr9:49303624-49303174 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 128 |
Conread position: | 3-299 |
Cow position: | chr9:60276981-60276669 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 216 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 3-328 |
Cow position: | chr9:29027177-29026824 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 238 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 3-328 |
Cow position: | chr9:47003220-47003560 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 239 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 34, 195 |
Conread position: | 3-471 |
Cow position: | chr9:1981307-1981789 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 120 |
Conread position: | 3-484 |
Cow position: | chr9:30435606-30436115 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 3-485 |
Cow position: | chr9:29627723-29627206 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 3-526 |
Cow position: | chr9:32969981-32970528 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 139 |
Conread position: | 3-660 |
Cow position: | chr9:19158505-19157811 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 377 |
Conread position: | 3-661 |
Cow position: | chr9:130130-129477 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 109 |
Conread position: | 3-661 |
Cow position: | chr9:779787-779103 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 109 |
Conread position: | 3-661 |
Cow position: | chr9:2871357-2872050 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 72 |
Conread position: | 3-661 |
Cow position: | chr9:6250333-6251003 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 108 |
Conread position: | 3-661 |
Cow position: | chr9:7061046-7060347 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 3-661 |
Cow position: | chr9:18508788-18508110 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 523 |
Conread position: | 3-661 |
Cow position: | chr9:20939353-20940018 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 108 |
Conread position: | 3-661 |
Cow position: | chr9:21410331-21411024 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 555 |
Conread position: | 3-661 |
Cow position: | chr9:28022840-28023518 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 232 |
Conread position: | 3-661 |
Cow position: | chr9:30673409-30674096 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 385 |
Conread position: | 3-661 |
Cow position: | chr9:31065752-31066437 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 122 |
Conread position: | 3-661 |
Cow position: | chr9:31808611-31809295 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 323 |
Conread position: | 3-661 |
Cow position: | chr9:37161778-37161098 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 212 |
Conread position: | 3-661 |
Cow position: | chr9:38677178-38677863 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 109 |
Conread position: | 3-661 |
Cow position: | chr9:42310712-42311410 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 252 |
Conread position: | 3-661 |
Cow position: | chr9:50791747-50792434 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 3-661 |
Cow position: | chr9:51181143-51180461 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 214 |
Conread position: | 3-661 |
Cow position: | chr9:59537132-59537820 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 3-662 |
Cow position: | chr9:47042993-47043680 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 12 |
Conread position: | 4-646 |
Cow position: | chr9:35315845-35315157 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 108 |
Conread position: | 4-661 |
Cow position: | chr9:1250965-1250279 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 108 |
Conread position: | 4-661 |
Cow position: | chr9:1995355-1994688 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 328 |
Conread position: | 4-661 |
Cow position: | chr9:3936398-3935755 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 89 |
Conread position: | 4-661 |
Cow position: | chr9:46042197-46041533 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 107 |
Conread position: | 4-661 |
Cow position: | chr9:64015612-64014953 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 91 |
Conread position: | 5-358 |
Cow position: | chr9:3167965-3168329 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 25, 40 |
Conread position: | 5-416 |
Cow position: | chr9:39731020-39730593 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 278 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 29, 336 |
Conread position: | 5-419 |
Cow position: | chr9:3963094-3962647 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 306 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 29, 390 |
Conread position: | 5-484 |
Cow position: | chr9:3727639-3728129 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 47 |
Conread position: | 5-616 |
Cow position: | chr9:27935413-27936052 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 120 |
Conread position: | 5-661 |
Cow position: | chr9:59428046-59428715 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 54 |
Conread position: | 10-299 |
Cow position: | chr9:4836300-4835992 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 26, 191 |
Conread position: | 11-661 |
Cow position: | chr9:54925590-54926248 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 11-662 |
Cow position: | chr9:5141754-5142414 (view UCSC Genome Browser custom track) |
Alignm length: | 672 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 71 |
Conread position: | 12-662 |
Cow position: | chr9:4283010-4283677 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 317 |
Conread position: | 16-612 |
Cow position: | chr9:13474724-13474102 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 59 |
Conread position: | 16-661 |
Cow position: | chr9:25188147-25188815 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 96 |
Conread position: | 17-616 |
Cow position: | chr9:4649557-4648973 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 356 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 17-661 |
Cow position: | chr9:25034516-25033848 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 95 |
Conread position: | 18-391 |
Cow position: | chr9:59481747-59481349 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 355 |
Conread position: | 18-524 |
Cow position: | chr9:30488643-30489173 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 354 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 19, 216 |
Conread position: | 18-661 |
Cow position: | chr9:3309671-3310332 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 93 |
Conread position: | 18-661 |
Cow position: | chr9:4942763-4942085 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 37 |
Conread position: | 18-661 |
Cow position: | chr9:9014133-9014789 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 187 |
Conread position: | 18-661 |
Cow position: | chr9:27783237-27783904 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 94 |
Conread position: | 19-608 |
Cow position: | chr9:37970157-37969545 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 92 |
Conread position: | 28-661 |
Cow position: | chr9:1075128-1074456 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 82 |
Conread position: | 32-655 |
Cow position: | chr9:20176650-20176000 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 318 |
Conread position: | 33-661 |
Cow position: | chr9:650960-650306 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 219 |
Conread position: | 35-661 |
Cow position: | chr9:25903574-25904240 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 74 |
Conread position: | 36-659 |
Cow position: | chr9:17304907-17304259 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 73 |
Conread position: | 36-659 |
Cow position: | chr9:35595009-35594371 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 73 |
Conread position: | 61-661 |
Cow position: | chr9:2679364-2679991 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 82-344 |
Cow position: | chr9:30191260-30190988 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 200 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 82-661 |
Cow position: | chr9:27036029-27036619 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 379 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 81, 33 |
Conread position: | 91-661 |
Cow position: | chr9:7003862-7004452 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 24 |
Conread position: | 94-660 |
Cow position: | chr9:2172084-2172657 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 370 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 14, 22 |
Conread position: | 98-655 |
Cow position: | chr9:2212276-2212852 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 257 |
Conread position: | 121-660 |
Cow position: | chr9:5005151-5005704 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 118 |
Conread position: | 130-613 |
Cow position: | chr9:25923784-25923332 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 330 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 335, 46 |
Conread position: | 130-616 |
Cow position: | chr9:50094063-50093565 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 407 |
Conread position: | 156-661 |
Cow position: | chr9:8781708-8781209 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 337 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 156-662 |
Cow position: | chr9:4717373-4717883 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 212 |
Conread position: | 185-524 |
Cow position: | chr9:47545430-47545777 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 242 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 76, 175 |
Conread position: | 190-661 |
Cow position: | chr9:9707364-9707835 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 23 |
Conread position: | 196-662 |
Cow position: | chr9:9647393-9647861 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 54 |
Conread position: | 206-661 |
Cow position: | chr9:29332502-29332975 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 273 |
Conread position: | 246-661 |
Cow position: | chr9:4308066-4307651 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 285 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 48, 109 |
Conread position: | 303-606 |
Cow position: | chr9:10976473-10976777 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 206 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 48, 223 |
Conread position: | 309-657 |
Cow position: | chr9:29789324-29788973 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 15, 43 |
Conread position: | 350-615 |
Cow position: | chr9:3804765-3805020 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 176 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 370-655 |
Cow position: | chr9:59509733-59509448 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 202 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 107, 160 |
Conread position: | 370-661 |
Cow position: | chr9:56303024-56302733 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 194 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 108, 153 |
Conread position: | 375-661 |
Cow position: | chr9:6709391-6709677 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 192 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 103, 148 |
Conread position: | 378-662 |
Cow position: | chr9:29044328-29044046 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 197 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 17, 155 |
Conread position: | 379-661 |
Cow position: | chr9:29026486-29026206 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 195 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 238, 94 |
Conread position: | 403-661 |
Cow position: | chr9:47004192-47004450 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 75, 120 |
Conread position: | 415-661 |
Cow position: | chr9:203821-203575 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 168 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 56, 108 |
Conread position: | 415-661 |
Cow position: | chr9:3962376-3962126 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 55, 214 |
Conread position: | 440-656 |
Cow position: | chr9:34769641-34769858 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 32, 83 |
Show alignments to all cow chromosomes.