Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               1-616
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               2-445
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 195
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               3-484
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               3-485
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-526
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 139
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 377
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 523
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 108
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 555
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 232
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 385
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 323
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 212
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 252
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 214
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               4-646
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 328
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 89
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               5-358
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               5-416
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 336
               

               Conread position:
               5-419
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               29, 390
               

               Conread position:
               5-484
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               5-616
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               10-299
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 191
               

               Conread position:
               11-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               11-662
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               12-662
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 317
               

               Conread position:
               16-612
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               16-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               17-616
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               356
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               17-661
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               18-391
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 355
               

               Conread position:
               18-524
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               354
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 216
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 187
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               19-608
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               28-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               32-655
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 318
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 219
               

               Conread position:
               35-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               36-659
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               36-659
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               61-661
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               82-344
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               379
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               91-661
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               94-660
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               98-655
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 257
               

               Conread position:
               121-660
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 118
               

               Conread position:
               130-613
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               335, 46
               

               Conread position:
               130-616
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 407
               

               Conread position:
               156-661
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 212
               

               Conread position:
               185-524
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               76, 175
               

               Conread position:
               190-661
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               196-662
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               206-661
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 273
               

               Conread position:
               246-661
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               48, 109
               

               Conread position:
               303-606
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 223
               

               Conread position:
               309-657
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               350-615
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               370-655
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               107, 160
               

               Conread position:
               370-661
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               375-661
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 148
               

               Conread position:
               378-662
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 155
               

               Conread position:
               379-661
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               238, 94
               

               Conread position:
               403-661
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 120
               

               Conread position:
               415-661
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               56, 108
               

               Conread position:
               415-661
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 214
               

               Conread position:
               440-656
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 83
               
Show alignments to all cow chromosomes.