Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 3-260
Cow position: chrX:8574550-8574285 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 34, 67

Conread position: 3-328
Cow position: chrX:1834758-1835104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 73

Conread position: 3-394
Cow position: chrX:29286374-29286789 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 108

Conread position: 3-427
Cow position: chrX:15486828-15486394 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 3-471
Cow position: chrX:46235683-46236179 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 3-476
Cow position: chrX:21589933-21590421 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-524
Cow position: chrX:12314811-12314274 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 107

Conread position: 3-568
Cow position: chrX:4752686-4752090 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 112

Conread position: 3-595
Cow position: chrX:37015063-37015674 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 3-607
Cow position: chrX:15126286-15125663 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 121

Conread position: 3-612
Cow position: chrX:18451919-18452556 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 3-616
Cow position: chrX:2561919-2561277 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 3-616
Cow position: chrX:12702763-12702123 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 3-616
Cow position: chrX:29935537-29936177 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 3-622
Cow position: chrX:5651696-5651090 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 3-653
Cow position: chrX:21830470-21831131 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-653
Cow position: chrX:28868305-28867623 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 3-655
Cow position: chrX:16276587-16277269 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 549

Conread position: 3-661
Cow position: chrX:321406-322090 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 156

Conread position: 3-661
Cow position: chrX:674262-673581 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 228

Conread position: 3-661
Cow position: chrX:971723-972404 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position: chrX:2481691-2481007 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 119

Conread position: 3-661
Cow position: chrX:2577366-2578048 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position: chrX:2815541-2814857 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:2858435-2857751 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:3084197-3083511 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 3-661
Cow position: chrX:3374968-3374283 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:3420271-3419593 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 437
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 54

Conread position: 3-661
Cow position: chrX:3467706-3467021 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 3-661
Cow position: chrX:5282840-5282159 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 3-661
Cow position: chrX:5322787-5322102 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 3-661
Cow position: chrX:7752840-7753525 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 109

Conread position: 3-661
Cow position: chrX:9009279-9009962 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position: chrX:11148395-11147707 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 3-661
Cow position: chrX:11422811-11423497 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:12183878-12184566 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 397

Conread position: 3-661
Cow position: chrX:12653583-12652879 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 3-661
Cow position: chrX:13412193-13411504 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position: chrX:14595788-14596470 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 3-661
Cow position: chrX:15178496-15177810 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 545

Conread position: 3-661
Cow position: chrX:15980018-15979333 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 108

Conread position: 3-661
Cow position: chrX:16362182-16361494 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 3-661
Cow position: chrX:16780232-16780908 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 30

Conread position: 3-661
Cow position: chrX:17052483-17053177 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 556

Conread position: 3-661
Cow position: chrX:17477484-17476794 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:17666844-17666172 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 3-661
Cow position: chrX:18220363-18221044 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 3-661
Cow position: chrX:18658851-18658182 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 3-661
Cow position: chrX:21643965-21643291 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 3-661
Cow position: chrX:22489084-22489782 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 384

Conread position: 3-661
Cow position: chrX:23277967-23278649 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position: chrX:23389575-23388910 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position: chrX:23455077-23454393 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 249

Conread position: 3-661
Cow position: chrX:26757674-26757006 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 3-661
Cow position: chrX:27083907-27084599 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position: chrX:27619193-27618510 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 424

Conread position: 3-661
Cow position: chrX:28585920-28586607 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:28626687-28626018 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 380

Conread position: 3-661
Cow position: chrX:28650613-28649945 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 220

Conread position: 3-661
Cow position: chrX:29172822-29172141 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 3-661
Cow position: chrX:29885930-29886614 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 396

Conread position: 3-661
Cow position: chrX:29910489-29909799 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 374

Conread position: 3-661
Cow position: chrX:30011939-30012625 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 3-661
Cow position: chrX:30068906-30068218 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 201

Conread position: 3-661
Cow position: chrX:30170889-30170228 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 11

Conread position: 3-661
Cow position: chrX:30201791-30201111 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:30231154-30230485 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 3-661
Cow position: chrX:31199503-31200182 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 224

Conread position: 3-661
Cow position: chrX:32066227-32065543 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position: chrX:35530793-35531481 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 3-661
Cow position: chrX:37813092-37813772 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position: chrX:38148536-38149217 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position: chrX:39562993-39562326 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 3-662
Cow position: chrX:12668810-12668121 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 439
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 122

Conread position: 3-662
Cow position: chrX:27316216-27316905 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 4-214
Cow position: chrX:10416511-10416289 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 107

Conread position: 4-299
Cow position: chrX:18553371-18553677 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 106

Conread position: 4-476
Cow position: chrX:23040182-23039684 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 120

Conread position: 4-660
Cow position: chrX:15623559-15622879 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 119

Conread position: 4-660
Cow position: chrX:28521654-28520980 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 108

Conread position: 4-661
Cow position: chrX:5296603-5295926 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 143

Conread position: 4-661
Cow position: chrX:13075755-13075077 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 108

Conread position: 4-661
Cow position: chrX:13096318-13095638 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 108

Conread position: 4-661
Cow position: chrX:24134318-24133670 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 4-661
Cow position: chrX:43072732-43073384 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 71

Conread position: 4-662
Cow position: chrX:30365843-30365175 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 139

Conread position: 5-399
Cow position: chrX:26426640-26426228 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 106

Conread position: 5-473
Cow position: chrX:35940319-35939847 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 5-616
Cow position: chrX:41102524-41101885 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 5-661
Cow position: chrX:20798263-20798922 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 218

Conread position: 5-662
Cow position: chrX:14784523-14783850 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 10-660
Cow position: chrX:6014003-6013348 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 151

Conread position: 13-661
Cow position: chrX:5356873-5356198 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 16-630
Cow position: chrX:2535116-2534490 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 95

Conread position: 17-601
Cow position: chrX:16811491-16810883 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 17-661
Cow position: chrX:12480948-12481622 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 473

Conread position: 17-661
Cow position: chrX:26766246-26765572 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 18-524
Cow position: chrX:29097151-29097687 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 93

Conread position: 18-591
Cow position: chrX:35386239-35385664 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 93

Conread position: 18-615
Cow position: chrX:26528930-26529542 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 156

Conread position: 18-661
Cow position: chrX:27593031-27592363 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 437

Conread position: 19-661
Cow position: chrX:1547935-1548602 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 356

Conread position: 19-661
Cow position: chrX:19875472-19876140 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 20-607
Cow position: chrX:15600117-15600715 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 162

Conread position: 20-661
Cow position: chrX:18952725-18952051 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 24-661
Cow position: chrX:24771902-24771236 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 347

Conread position: 33-606
Cow position: chrX:17609349-17608760 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 365
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 100

Conread position: 35-662
Cow position: chrX:28757664-28757017 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 67

Conread position: 82-596
Cow position: chrX:31376400-31376905 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 344
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 20

Conread position: 82-655
Cow position: chrX:41887962-41887367 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 82-661
Cow position: chrX:13447798-13447200 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 82-661
Cow position: chrX:16684808-16684210 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 82-661
Cow position: chrX:20035373-20034775 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 83-480
Cow position: chrX:7306749-7307149 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 257
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 120

Conread position: 84-661
Cow position: chrX:24324533-24323939 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 95-662
Cow position: chrX:32123102-32123682 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 82

Conread position: 108-607
Cow position: chrX:22567193-22566686 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 24

Conread position: 119-644
Cow position: chrX:28554703-28555242 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 345
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 208

Conread position: 121-661
Cow position: chrX:21491239-21491786 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 91

Conread position: 121-661
Cow position: chrX:21580556-21581112 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 417

Conread position: 122-494
Cow position: chrX:39694720-39695105 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 128-607
Cow position: chrX:15041452-15040974 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 320
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 61

Conread position: 130-616
Cow position: chrX:12667182-12667695 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 335
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 237

Conread position: 130-661
Cow position: chrX:28506187-28505643 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 29

Conread position: 132-660
Cow position: chrX:30182845-30182302 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 136-661
Cow position: chrX:23020387-23020921 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 148

Conread position: 138-595
Cow position: chrX:13054925-13055378 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 14

Conread position: 143-661
Cow position: chrX:31510721-31511248 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 46

Conread position: 145-661
Cow position: chrX:16700796-16701317 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 155-661
Cow position: chrX:30070778-30071294 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 210

Conread position: 167-661
Cow position: chrX:2144084-2144595 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 207

Conread position: 170-661
Cow position: chrX:20333440-20332934 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 368

Conread position: 195-616
Cow position: chrX:37850277-37850710 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 17, 342

Conread position: 196-661
Cow position: chrX:5393700-5393221 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 340

Conread position: 199-661
Cow position: chrX:37957905-37957429 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 338

Conread position: 207-662
Cow position: chrX:16848715-16848266 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 296
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 16

Conread position: 214-661
Cow position: chrX:22618034-22617579 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 291
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 51

Conread position: 219-661
Cow position: chrX:11463876-11463421 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 297
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 317

Conread position: 241-661
Cow position: chrX:9093836-9094269 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 119

Conread position: 242-661
Cow position: chrX:30436038-30436470 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 294

Conread position: 251-659
Cow position: chrX:45419032-45418624 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 96

Conread position: 258-661
Cow position: chrX:28664611-28665021 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 25

Conread position: 267-661
Cow position: chrX:7094691-7095094 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 264
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 265

Conread position: 279-661
Cow position: chrX:29096091-29095700 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 72

Conread position: 288-661
Cow position: chrX:1942107-1941740 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 190, 35

Conread position: 295-661
Cow position: chrX:22127882-22127507 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 183, 49

Conread position: 304-655
Cow position: chrX:42477541-42477196 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 20

Conread position: 313-638
Cow position: chrX:35026248-35026576 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 33

Conread position: 315-661
Cow position: chrX:24111486-24111137 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 13, 34

Conread position: 323-661
Cow position: chrX:21791900-21792240 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 23

Conread position: 356-661
Cow position: chrX:12463096-12463401 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 122, 167

Conread position: 363-662
Cow position: chrX:4412185-4412483 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 127

Conread position: 367-661
Cow position: chrX:12354855-12355148 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 156

Conread position: 370-661
Cow position: chrX:11459504-11459212 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 152

Conread position: 403-661
Cow position: chrX:10530421-10530164 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 117

Conread position: 421-661
Cow position: chrX:21507782-21507542 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 102

Conread position: 424-656
Cow position: chrX:3142108-3142336 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 99

Show alignments to all cow chromosomes.