Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-123
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 46

Conread position: 1-143
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 122

Conread position: 1-188
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 35

Conread position: 1-188
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 1-258
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 71, 95

Conread position: 1-353
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 40

Conread position: 1-375
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 96

Conread position: 1-388
Cow position:
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 1-394
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 135

Conread position: 1-395
Cow position:
Alignm length: 400
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 1-407
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 254

Conread position: 1-408
Cow position:
Alignm length: 420
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 104

Conread position: 1-426
Cow position:
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 11

Conread position: 1-428
Cow position:
Alignm length: 434
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 55

Conread position: 1-429
Cow position:
Alignm length: 437
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 117

Conread position: 1-431
Cow position:
Alignm length: 433
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 171

Conread position: 1-431
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 129

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 139

Conread position: 1-435
Cow position:
Alignm length: 455
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-435
Cow position:
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 172

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 278

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 451
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 139

Conread position: 1-435
Cow position:
Alignm length: 453
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 167

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 161

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 445

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 1-465
Cow position:
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 445

Conread position: 1-471
Cow position:
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 1-477
Cow position:
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 53

Conread position: 1-562
Cow position:
Alignm length: 576
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 264

Conread position: 2-471
Cow position:
Alignm length: 477
Alignm identity: 309
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 35

Conread position: 2-514
Cow position:
Alignm length: 527
Alignm identity: 337
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 69, 201

Conread position: 3-417
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 3-420
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-421
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 3-431
Cow position:
Alignm length: 448
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 135

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 317

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 218

Conread position: 3-431
Cow position:
Alignm length: 437
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 340

Conread position: 3-431
Cow position:
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 260

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 352

Conread position: 3-431
Cow position:
Alignm length: 455
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 64

Conread position: 3-431
Cow position:
Alignm length: 437
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 3-435
Cow position:
Alignm length: 441
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 314

Conread position: 3-435
Cow position:
Alignm length: 441
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 250

Conread position: 3-436
Cow position:
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 92

Conread position: 3-465
Cow position:
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 82

Conread position: 3-465
Cow position:
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 4-435
Cow position:
Alignm length: 444
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 70

Conread position: 4-435
Cow position:
Alignm length: 438
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 4-435
Cow position:
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 390

Conread position: 8-395
Cow position:
Alignm length: 399
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 163

Conread position: 9-435
Cow position:
Alignm length: 432
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 61

Conread position: 10-562
Cow position:
Alignm length: 576
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 200

Conread position: 12-319
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 226

Conread position: 36-465
Cow position:
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 129

Conread position: 42-188
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 84

Conread position: 54-432
Cow position:
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 57-435
Cow position:
Alignm length: 394
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 116

Conread position: 62-381
Cow position:
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 73-336
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 72

Conread position: 78-435
Cow position:
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 93-402
Cow position:
Alignm length: 316
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 117-416
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 34

Conread position: 175-491
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 180-436
Cow position:
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 140

Conread position: 235-427
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 242-435
Cow position:
Alignm length: 195
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 251-454
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 318-435
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 327-435
Cow position:
Alignm length: 109
Alignm identity: 97
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 343-532
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 15

Show alignments to all cow chromosomes.