Cow genome map
Conread name: | Emb1-C0005196_O14 |
Conread position: | 1-123 |
Cow position: | chr11:17280714-17280593 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 74, 46 |
Conread position: | 1-143 |
Cow position: | chr11:7687446-7687589 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 61, 122 |
Conread position: | 1-188 |
Cow position: | chr11:9736425-9736236 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 132 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 71, 35 |
Conread position: | 1-188 |
Cow position: | chr11:77235292-77235482 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-258 |
Cow position: | chr11:28050260-28050003 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 171 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 71, 95 |
Conread position: | 1-353 |
Cow position: | chr11:10049651-10050006 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 40 |
Conread position: | 1-375 |
Cow position: | chr11:81853096-81852723 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 262 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 73, 96 |
Conread position: | 1-388 |
Cow position: | chr11:44860998-44860607 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 124 |
Conread position: | 1-394 |
Cow position: | chr11:30125720-30125335 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 135 |
Conread position: | 1-395 |
Cow position: | chr11:30304772-30305158 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 52 |
Conread position: | 1-407 |
Cow position: | chr11:9157899-9157492 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 254 |
Conread position: | 1-408 |
Cow position: | chr11:14729993-14729581 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 273 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 71, 104 |
Conread position: | 1-426 |
Cow position: | chr11:7113128-7113554 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 11 |
Conread position: | 1-428 |
Cow position: | chr11:8262173-8261742 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 55 |
Conread position: | 1-429 |
Cow position: | chr11:28063217-28063639 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 117 |
Conread position: | 1-431 |
Cow position: | chr11:8887623-8887193 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 50 |
Conread position: | 1-431 |
Cow position: | chr11:34020430-34020855 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 171 |
Conread position: | 1-431 |
Cow position: | chr11:37477592-37477154 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-435 |
Cow position: | chr11:1496544-1496105 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 129 |
Conread position: | 1-435 |
Cow position: | chr11:3492539-3492980 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:9607048-9606609 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 139 |
Conread position: | 1-435 |
Cow position: | chr11:9659872-9659418 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-435 |
Cow position: | chr11:15983150-15983593 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 173 |
Conread position: | 1-435 |
Cow position: | chr11:17108159-17107717 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:19064723-19064280 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:20921219-20920776 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:25527099-25527527 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 152 |
Conread position: | 1-435 |
Cow position: | chr11:28230222-28229788 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 172 |
Conread position: | 1-435 |
Cow position: | chr11:32450394-32450836 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 278 |
Conread position: | 1-435 |
Cow position: | chr11:36744654-36744211 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:37492122-37491677 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 139 |
Conread position: | 1-435 |
Cow position: | chr11:45110887-45111338 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 167 |
Conread position: | 1-435 |
Cow position: | chr11:52418915-52419357 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 35 |
Conread position: | 1-435 |
Cow position: | chr11:53287928-53287487 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 155 |
Conread position: | 1-435 |
Cow position: | chr11:57628520-57628077 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 173 |
Conread position: | 1-435 |
Cow position: | chr11:61401513-61401082 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 152 |
Conread position: | 1-435 |
Cow position: | chr11:67450024-67450467 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr11:67847041-67846602 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 161 |
Conread position: | 1-460 |
Cow position: | chr11:21466603-21467067 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 445 |
Conread position: | 1-460 |
Cow position: | chr11:75919945-75920392 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 1-465 |
Cow position: | chr11:85394282-85393815 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 445 |
Conread position: | 1-471 |
Cow position: | chr11:42428866-42429338 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 31 |
Conread position: | 1-477 |
Cow position: | chr11:17220681-17220198 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 53 |
Conread position: | 1-562 |
Cow position: | chr11:8282605-8283171 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 264 |
Conread position: | 2-471 |
Cow position: | chr11:29234120-29233660 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 309 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 41, 35 |
Conread position: | 2-514 |
Cow position: | chr11:33044593-33044072 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 337 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 69, 201 |
Conread position: | 3-417 |
Cow position: | chr11:77728997-77728569 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 130 |
Conread position: | 3-420 |
Cow position: | chr11:19102958-19102532 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-421 |
Cow position: | chr11:12358893-12358470 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 150 |
Conread position: | 3-422 |
Cow position: | chr11:28055067-28054644 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 123 |
Conread position: | 3-431 |
Cow position: | chr11:4271341-4270896 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 135 |
Conread position: | 3-431 |
Cow position: | chr11:10846973-10847407 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 317 |
Conread position: | 3-431 |
Cow position: | chr11:23876833-23877267 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 218 |
Conread position: | 3-431 |
Cow position: | chr11:26125402-26124966 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-431 |
Cow position: | chr11:29669100-29668666 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 340 |
Conread position: | 3-431 |
Cow position: | chr11:38835888-38835466 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 260 |
Conread position: | 3-431 |
Cow position: | chr11:41171164-41170727 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-431 |
Cow position: | chr11:43515102-43514665 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-431 |
Cow position: | chr11:44157707-44157288 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 352 |
Conread position: | 3-431 |
Cow position: | chr11:58133898-58134352 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-431 |
Cow position: | chr11:71329173-71329609 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 64 |
Conread position: | 3-431 |
Cow position: | chr11:72110432-72110000 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 132 |
Conread position: | 3-435 |
Cow position: | chr11:8244236-8244673 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 314 |
Conread position: | 3-435 |
Cow position: | chr11:54209147-54209581 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 250 |
Conread position: | 3-436 |
Cow position: | chr11:4028021-4027593 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 92 |
Conread position: | 3-465 |
Cow position: | chr11:11987649-11988104 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 82 |
Conread position: | 3-465 |
Cow position: | chr11:24392854-24393315 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 150 |
Conread position: | 4-435 |
Cow position: | chr11:12351534-12351096 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 70 |
Conread position: | 4-435 |
Cow position: | chr11:44230658-44231082 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 100 |
Conread position: | 4-435 |
Cow position: | chr11:63660052-63659619 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 390 |
Conread position: | 8-395 |
Cow position: | chr11:44496062-44495666 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 163 |
Conread position: | 9-435 |
Cow position: | chr11:4041532-4041107 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 61 |
Conread position: | 10-562 |
Cow position: | chr11:10089871-10090441 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 200 |
Conread position: | 12-319 |
Cow position: | chr11:15998432-15998746 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 226 |
Conread position: | 36-465 |
Cow position: | chr11:66726027-66726476 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 129 |
Conread position: | 42-188 |
Cow position: | chr11:46962849-46962705 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 32, 84 |
Conread position: | 54-432 |
Cow position: | chr11:5343638-5343251 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 57-435 |
Cow position: | chr11:37065541-37065149 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 116 |
Conread position: | 62-381 |
Cow position: | chr11:10210371-10210048 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 73-336 |
Cow position: | chr11:32684890-32685154 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 182 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 112, 72 |
Conread position: | 78-435 |
Cow position: | chr11:64045604-64045967 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 93-402 |
Cow position: | chr11:40776921-40776606 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 117-416 |
Cow position: | chr11:75874140-75873833 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 201 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 65, 34 |
Conread position: | 175-491 |
Cow position: | chr11:17280585-17280277 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 9 |
Conread position: | 180-436 |
Cow position: | chr11:8519705-8519959 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 140 |
Conread position: | 235-427 |
Cow position: | chr11:4065466-4065268 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 155 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 242-435 |
Cow position: | chr11:33194778-33194584 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 159 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 251-454 |
Cow position: | chr11:9220336-9220130 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 318-435 |
Cow position: | chr11:59369460-59369577 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 327-435 |
Cow position: | chr11:8267681-8267573 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 97 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 343-532 |
Cow position: | chr11:10050589-10050783 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 89, 15 |
Show alignments to all cow chromosomes.