Cow genome map
| Conread name: | Emb1-C0005196_O14 |
| Conread position: | 1-340 |
| Cow position: | chr12:8982603-8982263 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 1-348 |
| Cow position: | chr12:26141627-26141983 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-362 |
| Cow position: | chr12:21207508-21207876 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 362 |
| Conread position: | 1-393 |
| Cow position: | chr12:17975364-17975751 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 1-424 |
| Cow position: | chr12:16293737-16294175 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-435 |
| Cow position: | chr12:2282360-2282802 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 1-435 |
| Cow position: | chr12:3360717-3361160 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr12:21254842-21254400 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr12:21901760-21902195 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 70 |
| Conread position: | 1-435 |
| Cow position: | chr12:22332435-22332880 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 168 |
| Conread position: | 1-435 |
| Cow position: | chr12:32653358-32653800 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 164 |
| Conread position: | 1-435 |
| Cow position: | chr12:43031569-43031129 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 277 |
| Conread position: | 1-435 |
| Cow position: | chr12:45261428-45261879 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 1-460 |
| Cow position: | chr12:26947167-26946713 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 1-465 |
| Cow position: | chr12:8310999-8311464 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 206 |
| Conread position: | 1-604 |
| Cow position: | chr12:15951446-15950847 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 37 |
| Conread position: | 2-168 |
| Cow position: | chr12:48404860-48405027 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-431 |
| Cow position: | chr12:20998305-20997881 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 2-435 |
| Cow position: | chr12:37558369-37558812 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 3-431 |
| Cow position: | chr12:252240-251806 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 3-431 |
| Cow position: | chr12:1402306-1402742 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 348 |
| Conread position: | 3-431 |
| Cow position: | chr12:6406831-6406399 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 3-431 |
| Cow position: | chr12:8678306-8677869 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 3-431 |
| Cow position: | chr12:11098057-11098494 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 371 |
| Conread position: | 3-431 |
| Cow position: | chr12:22205931-22205496 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 252 |
| Conread position: | 3-431 |
| Cow position: | chr12:25101246-25100809 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-431 |
| Cow position: | chr12:28766201-28765767 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr12:42859999-42859575 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 3-435 |
| Cow position: | chr12:2614-3055 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 424 |
| Conread position: | 3-457 |
| Cow position: | chr12:27933130-27932668 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 443 |
| Conread position: | 3-465 |
| Cow position: | chr12:14662796-14662350 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 132 |
| Conread position: | 4-431 |
| Cow position: | chr12:21426510-21426946 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 151-494 |
| Cow position: | chr12:18501009-18501347 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 321-474 |
| Cow position: | chr12:31544920-31545070 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 141, 116 |
Show alignments to all cow chromosomes.