Cow genome map
| Conread name: | Emb1-C0005196_O14 |
| Conread position: | 1-143 |
| Cow position: | chr14:45160333-45160480 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:48824085-48824250 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 1-285 |
| Cow position: | chr14:29265489-29265198 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 1-417 |
| Cow position: | chr14:47589344-47589760 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 1-427 |
| Cow position: | chr14:38816730-38816307 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 1-429 |
| Cow position: | chr14:46464539-46464977 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 1-431 |
| Cow position: | chr14:45029644-45029217 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 1-435 |
| Cow position: | chr14:750038-750481 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:2283808-2284250 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:7831069-7830629 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 211 |
| Conread position: | 1-435 |
| Cow position: | chr14:9045034-9045477 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:13660518-13660075 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 1-435 |
| Cow position: | chr14:17491988-17491545 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:23256828-23257270 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 1-435 |
| Cow position: | chr14:23901332-23900889 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:29048432-29047992 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 1-435 |
| Cow position: | chr14:33394307-33393865 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 1-435 |
| Cow position: | chr14:44422026-44422465 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 1-435 |
| Cow position: | chr14:44855956-44855516 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 300 |
| Conread position: | 1-435 |
| Cow position: | chr14:45205539-45205988 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 245 |
| Conread position: | 1-435 |
| Cow position: | chr14:45672576-45672134 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 331 |
| Conread position: | 1-435 |
| Cow position: | chr14:45712506-45712080 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 130 |
| Conread position: | 1-435 |
| Cow position: | chr14:45767475-45767913 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr14:45850694-45851133 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 122 |
| Conread position: | 1-435 |
| Cow position: | chr14:47624038-47624464 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 132 |
| Conread position: | 1-435 |
| Cow position: | chr14:50134541-50134985 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 1-450 |
| Cow position: | chr14:40170212-40169776 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 1-465 |
| Cow position: | chr14:38532826-38532354 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 212 |
| Conread position: | 1-465 |
| Cow position: | chr14:44130389-44130855 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 339 |
| Conread position: | 1-465 |
| Cow position: | chr14:45833630-45834094 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 1-467 |
| Cow position: | chr14:35928646-35929116 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 1-472 |
| Cow position: | chr14:23690755-23690284 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 1-569 |
| Cow position: | chr14:46084094-46084665 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 1-593 |
| Cow position: | chr14:44225878-44226461 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 1-604 |
| Cow position: | chr14:40339176-40339757 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 2-257 |
| Cow position: | chr14:31607450-31607197 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 174, 70 |
| Conread position: | 2-435 |
| Cow position: | chr14:36967729-36968166 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 2-435 |
| Cow position: | chr14:42151794-42152234 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-435 |
| Cow position: | chr14:44376906-44377348 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 2-603 |
| Cow position: | chr14:45303892-45303286 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 3-317 |
| Cow position: | chr14:45080005-45080313 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 3-362 |
| Cow position: | chr14:41755333-41755682 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 3-427 |
| Cow position: | chr14:13272729-13273150 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 3-427 |
| Cow position: | chr14:30707197-30706788 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 71, 102 |
| Conread position: | 3-431 |
| Cow position: | chr14:7471847-7472275 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr14:11154682-11154259 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr14:13302501-13302935 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 130 |
| Conread position: | 3-431 |
| Cow position: | chr14:17001584-17001152 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 344 |
| Conread position: | 3-431 |
| Cow position: | chr14:17684866-17685303 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 431 |
| Conread position: | 3-431 |
| Cow position: | chr14:20781927-20782363 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 230 |
| Conread position: | 3-431 |
| Cow position: | chr14:22032211-22031780 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr14:28994384-28993947 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-431 |
| Cow position: | chr14:37223373-37223808 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 170 |
| Conread position: | 3-431 |
| Cow position: | chr14:48254840-48254398 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 3-435 |
| Cow position: | chr14:44685519-44685954 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 131 |
| Conread position: | 3-435 |
| Cow position: | chr14:50110052-50110477 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 3-436 |
| Cow position: | chr14:16273825-16273384 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 135 |
| Conread position: | 3-465 |
| Cow position: | chr14:5528532-5529001 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 443 |
| Conread position: | 3-465 |
| Cow position: | chr14:15277107-15276641 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 204 |
| Conread position: | 3-465 |
| Cow position: | chr14:16920213-16919751 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 3-465 |
| Cow position: | chr14:19328798-19328329 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 443 |
| Conread position: | 3-529 |
| Cow position: | chr14:22018875-22019397 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 4-415 |
| Cow position: | chr14:31887150-31887561 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 273 |
| Conread position: | 6-604 |
| Cow position: | chr14:35387656-35387072 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 125 |
| Conread position: | 8-212 |
| Cow position: | chr14:44580397-44580607 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 8-285 |
| Cow position: | chr14:29579071-29579349 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 236 |
| Conread position: | 8-425 |
| Cow position: | chr14:14309598-14309173 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 9-428 |
| Cow position: | chr14:30585462-30585048 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 55 |
| Conread position: | 9-450 |
| Cow position: | chr14:30596904-30596458 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 139 |
| Conread position: | 21-460 |
| Cow position: | chr14:41085294-41084849 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 273 |
| Conread position: | 22-431 |
| Cow position: | chr14:13778456-13778862 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 174 |
| Conread position: | 36-486 |
| Cow position: | chr14:13864578-13864123 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 73-431 |
| Cow position: | chr14:44287707-44287343 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 78-435 |
| Cow position: | chr14:45916965-45917329 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 33 |
| Conread position: | 82-422 |
| Cow position: | chr14:13480175-13479836 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 66 |
| Conread position: | 95-465 |
| Cow position: | chr14:5511389-5511761 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 108-432 |
| Cow position: | chr14:22242461-22242789 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 214-431 |
| Cow position: | chr14:45160787-45161004 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 215-435 |
| Cow position: | chr14:45771087-45770868 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 123 |
Show alignments to all cow chromosomes.