Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 48

Conread position: 1-177
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 96

Conread position: 1-188
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 1-190
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 16

Conread position: 1-223
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 1-224
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 186, 118

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 0

Conread position: 1-270
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 58

Conread position: 1-292
Cow position:
Alignm length: 307
Alignm identity: 200
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 33

Conread position: 1-295
Cow position:
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-324
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-376
Cow position:
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-403
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-427
Cow position:
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 1-427
Cow position:
Alignm length: 446
Alignm identity: 296
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 61, 119

Conread position: 1-427
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 276, 75

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 1-432
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 245

Conread position: 1-432
Cow position:
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 1-432
Cow position:
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 267

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 367

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 153

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-435
Cow position:
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 43

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 206

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 260

Conread position: 1-435
Cow position:
Alignm length: 441
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 1-435
Cow position:
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 100

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 1-435
Cow position:
Alignm length: 449
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 129

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 113

Conread position: 1-450
Cow position:
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-460
Cow position:
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 1-464
Cow position:
Alignm length: 479
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-464
Cow position:
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 199

Conread position: 1-465
Cow position:
Alignm length: 475
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 21

Conread position: 1-465
Cow position:
Alignm length: 484
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 362

Conread position: 1-465
Cow position:
Alignm length: 487
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 371

Conread position: 1-465
Cow position:
Alignm length: 473
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 1-471
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 96

Conread position: 1-489
Cow position:
Alignm length: 502
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 1-506
Cow position:
Alignm length: 523
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 1-513
Cow position:
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 1-514
Cow position:
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 342

Conread position: 1-604
Cow position:
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 1-604
Cow position:
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 247

Conread position: 1-604
Cow position:
Alignm length: 607
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 117

Conread position: 1-604
Cow position:
Alignm length: 614
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 43

Conread position: 2-403
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 94

Conread position: 2-514
Cow position:
Alignm length: 526
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 96

Conread position: 3-183
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 169

Conread position: 3-269
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 57

Conread position: 3-392
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 152

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 238

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 254

Conread position: 3-422
Cow position:
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 70

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 162

Conread position: 3-428
Cow position:
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 36

Conread position: 3-431
Cow position:
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 138

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 234

Conread position: 3-431
Cow position:
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 139

Conread position: 3-431
Cow position:
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 209

Conread position: 3-431
Cow position:
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 81

Conread position: 3-435
Cow position:
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 71

Conread position: 3-435
Cow position:
Alignm length: 441
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 3-435
Cow position:
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 105

Conread position: 3-435
Cow position:
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 135

Conread position: 3-456
Cow position:
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-464
Cow position:
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 159

Conread position: 3-465
Cow position:
Alignm length: 473
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 153

Conread position: 3-465
Cow position:
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 350

Conread position: 3-466
Cow position:
Alignm length: 473
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 162

Conread position: 3-512
Cow position:
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 375

Conread position: 4-285
Cow position:
Alignm length: 286
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 4-429
Cow position:
Alignm length: 432
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 4-435
Cow position:
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 4-465
Cow position:
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 131

Conread position: 7-395
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 220

Conread position: 9-425
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 299

Conread position: 9-435
Cow position:
Alignm length: 437
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 9-435
Cow position:
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 239

Conread position: 9-435
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 13-459
Cow position:
Alignm length: 454
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 21-427
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 21-431
Cow position:
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 21-460
Cow position:
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 176

Conread position: 22-465
Cow position:
Alignm length: 456
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 36-435
Cow position:
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 39-429
Cow position:
Alignm length: 398
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Conread position: 40-431
Cow position:
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 43-435
Cow position:
Alignm length: 402
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 236

Conread position: 50-465
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 159

Conread position: 50-471
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 56-465
Cow position:
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 78-435
Cow position:
Alignm length: 363
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 286

Conread position: 99-250
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 63

Conread position: 145-435
Cow position:
Alignm length: 297
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 147-460
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 296

Conread position: 162-435
Cow position:
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 90

Conread position: 171-460
Cow position:
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 267

Conread position: 180-435
Cow position:
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 180-604
Cow position:
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 182

Conread position: 186-486
Cow position:
Alignm length: 301
Alignm identity: 200
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 203-465
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 259, 50

Conread position: 215-435
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 91

Conread position: 215-435
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 91

Conread position: 242-435
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 254-466
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 64

Conread position: 278-435
Cow position:
Alignm length: 158
Alignm identity: 138
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 295-465
Cow position:
Alignm length: 171
Alignm identity: 143
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 142, 0

Conread position: 315-435
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.