Cow genome map
Conread name: | Emb1-C0005196_O14 |
Conread position: | 1-160 |
Cow position: | chr19:4252446-4252287 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 73, 136 |
Conread position: | 1-188 |
Cow position: | chr19:4532835-4532652 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 143 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 73, 119 |
Conread position: | 1-188 |
Cow position: | chr19:32193489-32193680 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 137 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-243 |
Cow position: | chr19:29209473-29209721 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 187 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 73, 151 |
Conread position: | 1-281 |
Cow position: | chr19:20125533-20125803 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 197 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 74, 148 |
Conread position: | 1-305 |
Cow position: | chr19:34332-34641 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 275 |
Conread position: | 1-317 |
Cow position: | chr19:30372194-30372511 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 206 |
Conread position: | 1-334 |
Cow position: | chr19:31341618-31341976 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-365 |
Cow position: | chr19:261348-261728 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 132 |
Conread position: | 1-395 |
Cow position: | chr19:350371-349976 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 210 |
Conread position: | 1-398 |
Cow position: | chr19:32244596-32245002 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-400 |
Cow position: | chr19:39688455-39688847 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 51 |
Conread position: | 1-419 |
Cow position: | chr19:40887734-40887316 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 95 |
Conread position: | 1-432 |
Cow position: | chr19:416565-417012 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 433 |
Conread position: | 1-435 |
Cow position: | chr19:37808-38250 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 254 |
Conread position: | 1-435 |
Cow position: | chr19:772511-772954 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr19:32212158-32211718 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 207 |
Conread position: | 1-435 |
Cow position: | chr19:43143628-43144071 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 211 |
Conread position: | 1-465 |
Cow position: | chr19:39546536-39546993 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 291 |
Conread position: | 1-485 |
Cow position: | chr19:6553525-6554006 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 114 |
Conread position: | 1-507 |
Cow position: | chr19:15953767-15954267 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 50 |
Conread position: | 1-578 |
Cow position: | chr19:32223527-32222949 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 155 |
Conread position: | 2-192 |
Cow position: | chr19:561592-561401 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 133 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 72, 151 |
Conread position: | 2-197 |
Cow position: | chr19:28376444-28376634 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 150 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 186, 69 |
Conread position: | 2-435 |
Cow position: | chr19:28593190-28593618 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 277 |
Conread position: | 3-227 |
Cow position: | chr19:27052851-27052623 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 182 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 73, 46 |
Conread position: | 3-301 |
Cow position: | chr19:55078660-55078967 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-302 |
Cow position: | chr19:543711-543404 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 31 |
Conread position: | 3-422 |
Cow position: | chr19:7488227-7488655 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 3-422 |
Cow position: | chr19:28581740-28581317 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 232 |
Conread position: | 3-427 |
Cow position: | chr19:893699-893268 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 238 |
Conread position: | 3-431 |
Cow position: | chr19:203877-204312 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 128 |
Conread position: | 3-431 |
Cow position: | chr19:33873341-33873777 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 153 |
Conread position: | 3-431 |
Cow position: | chr19:33941526-33941961 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 238 |
Conread position: | 3-435 |
Cow position: | chr19:172125-172566 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 3-435 |
Cow position: | chr19:10672392-10671951 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-435 |
Cow position: | chr19:40852516-40852083 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 130 |
Conread position: | 3-455 |
Cow position: | chr19:76327-75893 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 71 |
Conread position: | 4-431 |
Cow position: | chr19:4385400-4385820 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 45 |
Conread position: | 4-435 |
Cow position: | chr19:7341983-7342423 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 5-427 |
Cow position: | chr19:439727-439310 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 128 |
Conread position: | 5-431 |
Cow position: | chr19:170824-170396 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 158 |
Conread position: | 13-422 |
Cow position: | chr19:32665454-32665867 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 297 |
Conread position: | 18-340 |
Cow position: | chr19:32785682-32785355 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 210 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 61, 186 |
Conread position: | 36-327 |
Cow position: | chr19:32237733-32237440 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 272 |
Conread position: | 85-435 |
Cow position: | chr19:687065-687418 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 26 |
Conread position: | 111-435 |
Cow position: | chr19:52151806-52151475 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 122-415 |
Cow position: | chr19:2274338-2274043 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 150-427 |
Cow position: | chr19:7449959-7449682 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 194 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 23, 118 |
Conread position: | 150-459 |
Cow position: | chr19:1032141-1032450 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 57 |
Conread position: | 186-503 |
Cow position: | chr19:42248911-42249235 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 88 |
Conread position: | 186-604 |
Cow position: | chr19:352888-352455 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 339 |
Conread position: | 238-435 |
Cow position: | chr19:28376641-28376841 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 239-465 |
Cow position: | chr19:40817545-40817321 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 47, 202 |
Conread position: | 244-435 |
Cow position: | chr19:29209762-29209952 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 291-436 |
Cow position: | chr19:4532418-4532282 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 117 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 295-574 |
Cow position: | chr19:163215-162930 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 197 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 154, 139 |
Conread position: | 301-604 |
Cow position: | chr19:42906-43208 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 223 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 136, 221 |
Conread position: | 306-604 |
Cow position: | chr19:27052622-27052334 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 95 |
Conread position: | 346-471 |
Cow position: | chr19:30372512-30372634 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 116, 91 |
Conread position: | 378-604 |
Cow position: | chr19:137058-136833 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 56, 122 |
Show alignments to all cow chromosomes.