Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-188
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 113

Conread position: 1-188
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 1-188
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 114

Conread position: 1-229
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 18

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 147

Conread position: 1-293
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 9

Conread position: 1-308
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 172, 66

Conread position: 1-312
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 31

Conread position: 1-315
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 273

Conread position: 1-333
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 1-343
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 167, 11

Conread position: 1-381
Cow position:
Alignm length: 394
Alignm identity: 247
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 116

Conread position: 1-382
Cow position:
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 234

Conread position: 1-390
Cow position:
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 1-397
Cow position:
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 66

Conread position: 1-398
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 245, 62

Conread position: 1-427
Cow position:
Alignm length: 435
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 173

Conread position: 1-427
Cow position:
Alignm length: 442
Alignm identity: 287
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 117

Conread position: 1-428
Cow position:
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 153

Conread position: 1-429
Cow position:
Alignm length: 438
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 171

Conread position: 1-432
Cow position:
Alignm length: 437
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 33

Conread position: 1-432
Cow position:
Alignm length: 440
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 96

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 358

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 192

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 1-435
Cow position:
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 1-435
Cow position:
Alignm length: 448
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 368

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 1-435
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 380

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 376

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 365

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 365

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 333

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 164

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 152

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-449
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 55

Conread position: 1-456
Cow position:
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-460
Cow position:
Alignm length: 466
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 1-460
Cow position:
Alignm length: 465
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 11

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 436

Conread position: 1-460
Cow position:
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 146

Conread position: 1-463
Cow position:
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 1-465
Cow position:
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 1-465
Cow position:
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 285

Conread position: 1-486
Cow position:
Alignm length: 496
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 445

Conread position: 1-506
Cow position:
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 154

Conread position: 1-532
Cow position:
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 328

Conread position: 1-601
Cow position:
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 1-602
Cow position:
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 72

Conread position: 1-604
Cow position:
Alignm length: 619
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 49

Conread position: 1-604
Cow position:
Alignm length: 614
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-604
Cow position:
Alignm length: 619
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 117

Conread position: 2-327
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 47

Conread position: 2-327
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 61

Conread position: 2-362
Cow position:
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 272

Conread position: 2-431
Cow position:
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 305

Conread position: 2-435
Cow position:
Alignm length: 448
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 236

Conread position: 2-435
Cow position:
Alignm length: 441
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 118

Conread position: 3-143
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 3-179
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 3-188
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 3-428
Cow position:
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 3-428
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 107

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 276

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 161

Conread position: 3-431
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 73

Conread position: 3-431
Cow position:
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 61

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 94

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 195

Conread position: 3-435
Cow position:
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 314

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-435
Cow position:
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 155

Conread position: 3-435
Cow position:
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 78

Conread position: 3-465
Cow position:
Alignm length: 472
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 450

Conread position: 3-465
Cow position:
Alignm length: 474
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 451

Conread position: 3-465
Cow position:
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 439

Conread position: 4-395
Cow position:
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 4-409
Cow position:
Alignm length: 425
Alignm identity: 283
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 70, 225

Conread position: 4-412
Cow position:
Alignm length: 421
Alignm identity: 265
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 44

Conread position: 4-432
Cow position:
Alignm length: 438
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 356

Conread position: 4-435
Cow position:
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 5-458
Cow position:
Alignm length: 466
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 7-297
Cow position:
Alignm length: 302
Alignm identity: 197
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 44

Conread position: 7-435
Cow position:
Alignm length: 461
Alignm identity: 319
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 222

Conread position: 11-460
Cow position:
Alignm length: 457
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 143

Conread position: 14-604
Cow position:
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 118

Conread position: 21-431
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 39-427
Cow position:
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 34

Conread position: 61-603
Cow position:
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 73-587
Cow position:
Alignm length: 539
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 64

Conread position: 87-435
Cow position:
Alignm length: 350
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 84

Conread position: 111-431
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 135-562
Cow position:
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 130

Conread position: 141-435
Cow position:
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 162-546
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 209

Conread position: 186-409
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 128

Conread position: 217-497
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 162

Conread position: 221-435
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 247-432
Cow position:
Alignm length: 187
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 268-489
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 162

Conread position: 298-586
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 141, 79

Conread position: 315-435
Cow position:
Alignm length: 121
Alignm identity: 107
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 322-435
Cow position:
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 337-498
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 52

Conread position: 365-558
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 133

Show alignments to all cow chromosomes.