Cow genome map
| Conread name: | Emb1-C0005196_O14 |
| Conread position: | 1-164 |
| Cow position: | chr20:19192259-19192093 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-186 |
| Cow position: | chr20:10846209-10846020 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-221 |
| Cow position: | chr20:4799782-4799554 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-222 |
| Cow position: | chr20:10102680-10102461 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 1-266 |
| Cow position: | chr20:21393439-21393706 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 1-298 |
| Cow position: | chr20:24516903-24517206 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 1-315 |
| Cow position: | chr20:11679241-11678918 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-424 |
| Cow position: | chr20:15064638-15065066 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 134 |
| Conread position: | 1-431 |
| Cow position: | chr20:24614415-24614843 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 1-435 |
| Cow position: | chr20:822636-823079 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr20:5484061-5484502 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 1-435 |
| Cow position: | chr20:5560846-5560403 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr20:8313567-8313128 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 211 |
| Conread position: | 1-435 |
| Cow position: | chr20:19437827-19438252 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 1-460 |
| Cow position: | chr20:3252264-3251802 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 345 |
| Conread position: | 1-465 |
| Cow position: | chr20:3270580-3271042 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 1-488 |
| Cow position: | chr20:9954114-9953617 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 409 |
| Conread position: | 2-431 |
| Cow position: | chr20:27869067-27869505 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 3-427 |
| Cow position: | chr20:35119445-35119873 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 3-428 |
| Cow position: | chr20:13762773-13763209 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-431 |
| Cow position: | chr20:5534810-5535245 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 3-431 |
| Cow position: | chr20:8004354-8003918 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 262 |
| Conread position: | 3-431 |
| Cow position: | chr20:15098007-15097569 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 3-431 |
| Cow position: | chr20:15291889-15292318 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 3-431 |
| Cow position: | chr20:23469788-23469358 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 310 |
| Conread position: | 3-431 |
| Cow position: | chr20:28160653-28161078 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr20:28565725-28565288 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 170 |
| Conread position: | 3-435 |
| Cow position: | chr20:7116598-7116158 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 131 |
| Conread position: | 3-436 |
| Cow position: | chr20:21914197-21914640 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 4-431 |
| Cow position: | chr20:23798754-23799193 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 399 |
| Conread position: | 4-431 |
| Cow position: | chr20:25851118-25850683 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 5-431 |
| Cow position: | chr20:30684212-30684628 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 5-465 |
| Cow position: | chr20:12438888-12438421 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 441 |
| Conread position: | 6-435 |
| Cow position: | chr20:15947519-15947068 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 340 |
| Conread position: | 6-562 |
| Cow position: | chr20:18315710-18315172 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 21-435 |
| Cow position: | chr20:25960992-25961415 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 35-427 |
| Cow position: | chr20:13680154-13679754 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 106 |
| Conread position: | 39-468 |
| Cow position: | chr20:3032971-3033406 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 74-422 |
| Cow position: | chr20:29948444-29948798 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 90-429 |
| Cow position: | chr20:3684524-3684182 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 156 |
| Conread position: | 176-385 |
| Cow position: | chr20:10841194-10840985 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 127 |
| Conread position: | 235-465 |
| Cow position: | chr20:10846006-10845783 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
Show alignments to all cow chromosomes.