Cow genome map
| Conread name: | Emb1-C0005196_O14 |
| Conread position: | 1-147 |
| Cow position: | chr23:8980677-8980528 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-255 |
| Cow position: | chr23:16481538-16481296 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 186, 70 |
| Conread position: | 1-314 |
| Cow position: | chr23:2340220-2340532 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 1-353 |
| Cow position: | chr23:4815888-4816251 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-378 |
| Cow position: | chr23:1025244-1024863 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 1-400 |
| Cow position: | chr23:2524380-2523974 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-400 |
| Cow position: | chr23:5874960-5874559 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 310 |
| Conread position: | 1-431 |
| Cow position: | chr23:4434280-4434710 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 1-435 |
| Cow position: | chr23:2313422-2312982 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 309 |
| Conread position: | 1-435 |
| Cow position: | chr23:4276770-4277213 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr23:4359645-4360088 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-435 |
| Cow position: | chr23:4751829-4752244 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 146 |
| Conread position: | 1-435 |
| Cow position: | chr23:7273471-7273889 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 1-435 |
| Cow position: | chr23:16617034-16616588 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 1-435 |
| Cow position: | chr23:28217106-28217548 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 1-435 |
| Cow position: | chr23:31446630-31447073 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-460 |
| Cow position: | chr23:988825-988369 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 153 |
| Conread position: | 1-465 |
| Cow position: | chr23:5779269-5778803 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 443 |
| Conread position: | 2-385 |
| Cow position: | chr23:3013463-3013854 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 2-456 |
| Cow position: | chr23:14974746-14974289 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 211 |
| Conread position: | 3-419 |
| Cow position: | chr23:20156416-20155973 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-422 |
| Cow position: | chr23:15525428-15525855 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 3-431 |
| Cow position: | chr23:2027301-2026865 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 148 |
| Conread position: | 3-431 |
| Cow position: | chr23:2795744-2795314 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 3-431 |
| Cow position: | chr23:3881881-3881451 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 3-431 |
| Cow position: | chr23:4640807-4640370 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 3-431 |
| Cow position: | chr23:4888498-4888927 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 132 |
| Conread position: | 3-431 |
| Cow position: | chr23:14965929-14965498 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 229 |
| Conread position: | 3-431 |
| Cow position: | chr23:30636484-30636047 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 271 |
| Conread position: | 3-436 |
| Cow position: | chr23:27399321-27399762 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 364 |
| Conread position: | 3-450 |
| Cow position: | chr23:967529-967077 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 280 |
| Conread position: | 3-460 |
| Cow position: | chr23:4509918-4510356 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 167 |
| Conread position: | 3-461 |
| Cow position: | chr23:36031554-36031087 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 3-465 |
| Cow position: | chr23:11778303-11778774 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 71 |
| Conread position: | 3-465 |
| Cow position: | chr23:15176892-15177356 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 251 |
| Conread position: | 3-465 |
| Cow position: | chr23:22147440-22146969 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 3-466 |
| Cow position: | chr23:19489355-19489829 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 440 |
| Conread position: | 4-435 |
| Cow position: | chr23:20302030-20302470 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 412 |
| Conread position: | 5-435 |
| Cow position: | chr23:19950764-19950325 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-429 |
| Cow position: | chr23:17184954-17185380 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 7-465 |
| Cow position: | chr23:15220076-15219603 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 155 |
| Conread position: | 13-429 |
| Cow position: | chr23:25684231-25683812 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 49-435 |
| Cow position: | chr23:31591945-31591544 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 73-546 |
| Cow position: | chr23:1327570-1327102 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 73-602 |
| Cow position: | chr23:29474663-29474132 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 78-465 |
| Cow position: | chr23:2757489-2757880 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 365 |
| Conread position: | 102-486 |
| Cow position: | chr23:2716309-2716696 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 130 |
| Conread position: | 128-465 |
| Cow position: | chr23:2574481-2574820 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 229 |
| Conread position: | 228-471 |
| Cow position: | chr23:2765403-2765162 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 211 |
| Conread position: | 246-435 |
| Cow position: | chr23:8980252-8980063 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 312-580 |
| Cow position: | chr23:1402745-1402481 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 7 |
Show alignments to all cow chromosomes.