Cow genome map
Conread name: | Emb1-C0005196_O14 |
Conread position: | 1-188 |
Cow position: | chr28:17330663-17330477 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 1-205 |
Cow position: | chr28:15681749-15681951 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 76, 150 |
Conread position: | 1-277 |
Cow position: | chr28:24652151-24652427 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 199 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 73, 151 |
Conread position: | 1-295 |
Cow position: | chr28:15950841-15951142 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 119 |
Conread position: | 1-302 |
Cow position: | chr28:7817081-7817373 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 211 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 32, 152 |
Conread position: | 1-348 |
Cow position: | chr28:27937589-27937243 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 231 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 1-397 |
Cow position: | chr28:15920606-15920200 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-428 |
Cow position: | chr28:24667440-24667874 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 97 |
Conread position: | 1-431 |
Cow position: | chr28:7901211-7901660 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 1-431 |
Cow position: | chr28:32792519-32792082 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 367 |
Conread position: | 1-435 |
Cow position: | chr28:2591776-2592217 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr28:6780469-6780031 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 131 |
Conread position: | 1-435 |
Cow position: | chr28:7822117-7822560 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr28:13441017-13440574 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-435 |
Cow position: | chr28:14750408-14750849 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 132 |
Conread position: | 1-435 |
Cow position: | chr28:24587293-24587737 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-450 |
Cow position: | chr28:1387535-1387084 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 288 |
Conread position: | 1-458 |
Cow position: | chr28:8721585-8721123 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 18 |
Conread position: | 1-460 |
Cow position: | chr28:9953996-9954456 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 57 |
Conread position: | 1-465 |
Cow position: | chr28:9155425-9154956 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 334 |
Conread position: | 1-506 |
Cow position: | chr28:10619247-10618740 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 49 |
Conread position: | 1-604 |
Cow position: | chr28:2989824-2989233 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 33 |
Conread position: | 1-604 |
Cow position: | chr28:5812568-5813153 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 150 |
Conread position: | 1-604 |
Cow position: | chr28:21358874-21359475 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 51 |
Conread position: | 3-131 |
Cow position: | chr28:1168302-1168174 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 71, 31 |
Conread position: | 3-165 |
Cow position: | chr28:15035634-15035470 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-174 |
Cow position: | chr28:29819432-29819603 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 71, 168 |
Conread position: | 3-315 |
Cow position: | chr28:26426412-26426099 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 225 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 73, 150 |
Conread position: | 3-409 |
Cow position: | chr28:5565723-5566130 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 123 |
Conread position: | 3-409 |
Cow position: | chr28:17667650-17667237 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 3-415 |
Cow position: | chr28:22261289-22260868 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 170 |
Conread position: | 3-416 |
Cow position: | chr28:1504717-1505135 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 46 |
Conread position: | 3-427 |
Cow position: | chr28:8378426-8378863 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-428 |
Cow position: | chr28:7001850-7002285 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-428 |
Cow position: | chr28:10582124-10581690 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 222 |
Conread position: | 3-428 |
Cow position: | chr28:18520599-18520164 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-431 |
Cow position: | chr28:2083466-2083894 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 133 |
Conread position: | 3-431 |
Cow position: | chr28:3192929-3192493 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 150 |
Conread position: | 3-431 |
Cow position: | chr28:5114938-5114513 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 170 |
Conread position: | 3-431 |
Cow position: | chr28:12150177-12150602 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 67 |
Conread position: | 3-431 |
Cow position: | chr28:12410348-12409927 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 50 |
Conread position: | 3-431 |
Cow position: | chr28:14705810-14705373 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 329 |
Conread position: | 3-431 |
Cow position: | chr28:17388343-17388780 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 3-431 |
Cow position: | chr28:33252179-33252610 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 93 |
Conread position: | 3-465 |
Cow position: | chr28:1815006-1814537 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 443 |
Conread position: | 3-465 |
Cow position: | chr28:13459833-13460300 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 448 |
Conread position: | 3-465 |
Cow position: | chr28:15378130-15377662 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 323 |
Conread position: | 4-580 |
Cow position: | chr28:7790435-7789836 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 71 |
Conread position: | 5-435 |
Cow position: | chr28:1952994-1953432 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 149 |
Conread position: | 9-422 |
Cow position: | chr28:782263-782684 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 147 |
Conread position: | 10-465 |
Cow position: | chr28:7740362-7740811 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 54 |
Conread position: | 12-436 |
Cow position: | chr28:9137178-9136748 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 296 |
Conread position: | 22-495 |
Cow position: | chr28:34648823-34649312 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 84 |
Conread position: | 32-228 |
Cow position: | chr28:22233798-22233595 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 39-435 |
Cow position: | chr28:2724993-2724590 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 375 |
Conread position: | 87-460 |
Cow position: | chr28:4380890-4380521 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 103 |
Conread position: | 111-428 |
Cow position: | chr28:22065764-22065448 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 236 |
Conread position: | 114-431 |
Cow position: | chr28:5751730-5751407 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 5 |
Conread position: | 121-428 |
Cow position: | chr28:1167899-1167586 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 85 |
Conread position: | 121-431 |
Cow position: | chr28:34593961-34594277 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 177-604 |
Cow position: | chr28:5797475-5797901 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 67 |
Conread position: | 180-422 |
Cow position: | chr28:1931939-1931695 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 182-460 |
Cow position: | chr28:17324303-17324021 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 180 |
Conread position: | 217-435 |
Cow position: | chr28:485479-485260 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 238-431 |
Cow position: | chr28:22233293-22233101 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 156 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 43, 81 |
Conread position: | 238-604 |
Cow position: | chr28:10071089-10071448 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 64 |
Conread position: | 263-460 |
Cow position: | chr28:13490280-13490474 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 175 |
Conread position: | 271-444 |
Cow position: | chr28:6539124-6538950 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 146 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 307-435 |
Cow position: | chr28:24652942-24652814 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 115 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 327-530 |
Cow position: | chr28:11357519-11357313 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 104, 159 |
Conread position: | 352-470 |
Cow position: | chr28:2886525-2886639 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 371-603 |
Cow position: | chr28:7817377-7817616 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 161 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 58, 135 |
Conread position: | 386-590 |
Cow position: | chr28:5764500-5764706 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 150 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 45, 105 |
Show alignments to all cow chromosomes.