Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-172
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 104

Conread position: 1-178
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 1-188
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 168

Conread position: 1-251
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 1-252
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 70, 0

Conread position: 1-281
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 1-292
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 186, 54

Conread position: 1-300
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-316
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 74, 104

Conread position: 1-342
Cow position:
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-353
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-365
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 32

Conread position: 1-368
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-391
Cow position:
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 1-397
Cow position:
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-404
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 91

Conread position: 1-415
Cow position:
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 72

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 164

Conread position: 1-427
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 170

Conread position: 1-432
Cow position:
Alignm length: 437
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 172

Conread position: 1-432
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 60

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 117

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 379

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 73

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 327

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 1-435
Cow position:
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 115

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 256

Conread position: 1-435
Cow position:
Alignm length: 438
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 162

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 266

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 84

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 279

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 84

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 278

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 294

Conread position: 1-454
Cow position:
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 1-454
Cow position:
Alignm length: 469
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 173

Conread position: 1-455
Cow position:
Alignm length: 469
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 208

Conread position: 1-456
Cow position:
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 97

Conread position: 1-460
Cow position:
Alignm length: 466
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 1-460
Cow position:
Alignm length: 467
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 443

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 438

Conread position: 1-465
Cow position:
Alignm length: 470
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 102

Conread position: 1-471
Cow position:
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 60

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 96

Conread position: 1-506
Cow position:
Alignm length: 516
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 32

Conread position: 1-506
Cow position:
Alignm length: 521
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 1-514
Cow position:
Alignm length: 533
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 134

Conread position: 1-529
Cow position:
Alignm length: 546
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 118

Conread position: 1-562
Cow position:
Alignm length: 578
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 119

Conread position: 1-604
Cow position:
Alignm length: 621
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 60

Conread position: 1-604
Cow position:
Alignm length: 622
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 1-604
Cow position:
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 2-435
Cow position:
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 370

Conread position: 2-435
Cow position:
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 2-604
Cow position:
Alignm length: 620
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 30

Conread position: 3-151
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 3-348
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 166

Conread position: 3-358
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 87

Conread position: 3-396
Cow position:
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 36

Conread position: 3-416
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 3-421
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 131

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 124

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 417

Conread position: 3-431
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 132

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 45

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 61

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 3-431
Cow position:
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 411

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 46

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 398

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-435
Cow position:
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 3-435
Cow position:
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 45

Conread position: 3-465
Cow position:
Alignm length: 475
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 6

Conread position: 3-465
Cow position:
Alignm length: 473
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 3-465
Cow position:
Alignm length: 471
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 204

Conread position: 3-465
Cow position:
Alignm length: 471
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 70

Conread position: 3-465
Cow position:
Alignm length: 472
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 450

Conread position: 3-465
Cow position:
Alignm length: 474
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 444

Conread position: 3-517
Cow position:
Alignm length: 536
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 4-435
Cow position:
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 4-435
Cow position:
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 137

Conread position: 4-435
Cow position:
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 60

Conread position: 4-503
Cow position:
Alignm length: 514
Alignm identity: 334
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 69

Conread position: 5-435
Cow position:
Alignm length: 440
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 109

Conread position: 7-185
Cow position:
Alignm length: 182
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 9-370
Cow position:
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 346

Conread position: 9-435
Cow position:
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 200

Conread position: 9-435
Cow position:
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 118

Conread position: 9-489
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 65

Conread position: 21-428
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 132

Conread position: 21-435
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 152

Conread position: 22-590
Cow position:
Alignm length: 584
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 293

Conread position: 23-422
Cow position:
Alignm length: 408
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 41-456
Cow position:
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 399

Conread position: 73-431
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 77

Conread position: 85-604
Cow position:
Alignm length: 539
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 11

Conread position: 87-431
Cow position:
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 146

Conread position: 102-543
Cow position:
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 111-422
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 237

Conread position: 111-431
Cow position:
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 113-432
Cow position:
Alignm length: 326
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 114-409
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 187

Conread position: 115-454
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 82

Conread position: 119-431
Cow position:
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 90

Conread position: 139-435
Cow position:
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 137

Conread position: 140-435
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 140-435
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 140-465
Cow position:
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 303

Conread position: 154-435
Cow position:
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 160

Conread position: 154-435
Cow position:
Alignm length: 283
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 46

Conread position: 178-435
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 191

Conread position: 256-435
Cow position:
Alignm length: 181
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 257-604
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 207

Conread position: 271-600
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 111

Conread position: 282-460
Cow position:
Alignm length: 179
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 0

Conread position: 291-435
Cow position:
Alignm length: 145
Alignm identity: 125
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 338-477
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.