Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-128
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 110

Conread position: 1-144
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 60

Conread position: 1-144
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 17

Conread position: 1-172
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 107

Conread position: 1-280
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 73, 240

Conread position: 1-285
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 103

Conread position: 1-343
Cow position:
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 84

Conread position: 1-364
Cow position:
Alignm length: 375
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 1-366
Cow position:
Alignm length: 373
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 145

Conread position: 1-389
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 218

Conread position: 1-396
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 172, 28

Conread position: 1-416
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 21

Conread position: 1-417
Cow position:
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 247

Conread position: 1-427
Cow position:
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 294

Conread position: 1-427
Cow position:
Alignm length: 434
Alignm identity: 284
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 74, 149

Conread position: 1-427
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 73, 96

Conread position: 1-431
Cow position:
Alignm length: 441
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 119

Conread position: 1-435
Cow position:
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 176

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 254

Conread position: 1-435
Cow position:
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 96

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 237

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 396

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 287

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 253

Conread position: 1-435
Cow position:
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-444
Cow position:
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 193

Conread position: 1-460
Cow position:
Alignm length: 470
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 231

Conread position: 1-460
Cow position:
Alignm length: 477
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 453

Conread position: 1-465
Cow position:
Alignm length: 473
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 226

Conread position: 1-465
Cow position:
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 452

Conread position: 1-465
Cow position:
Alignm length: 475
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 1-495
Cow position:
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 52

Conread position: 1-529
Cow position:
Alignm length: 538
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 8

Conread position: 1-604
Cow position:
Alignm length: 621
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 212

Conread position: 1-604
Cow position:
Alignm length: 626
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 269

Conread position: 2-175
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 102

Conread position: 2-257
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 185, 71

Conread position: 2-422
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 242

Conread position: 2-431
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 2-437
Cow position:
Alignm length: 446
Alignm identity: 286
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 72

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 3-169
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 3-188
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 117

Conread position: 3-260
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 3-268
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 15

Conread position: 3-382
Cow position:
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-409
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-428
Cow position:
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 378

Conread position: 3-431
Cow position:
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 353

Conread position: 3-431
Cow position:
Alignm length: 443
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 205

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 88

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 170

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 368

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 129

Conread position: 3-465
Cow position:
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 3-465
Cow position:
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 171

Conread position: 3-465
Cow position:
Alignm length: 468
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 36

Conread position: 3-465
Cow position:
Alignm length: 472
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 405

Conread position: 3-465
Cow position:
Alignm length: 468
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 193

Conread position: 3-499
Cow position:
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 451

Conread position: 4-427
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 5-168
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 51

Conread position: 5-427
Cow position:
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 5-456
Cow position:
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 215

Conread position: 9-432
Cow position:
Alignm length: 433
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 9-435
Cow position:
Alignm length: 436
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 9-435
Cow position:
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 14-431
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 120

Conread position: 17-465
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 19-435
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 98

Conread position: 26-419
Cow position:
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 90-435
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 43

Conread position: 96-435
Cow position:
Alignm length: 346
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 117-435
Cow position:
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 126-435
Cow position:
Alignm length: 316
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 114

Conread position: 178-456
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 51

Conread position: 218-428
Cow position:
Alignm length: 212
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 276-556
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 64

Conread position: 299-510
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 77, 45

Conread position: 312-460
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 329-435
Cow position:
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.