Cow genome map
| Conread name: | Emb1-C0005196_O14 | 
| Conread position: | 1-128 | 
| Cow position: | chr6:65007622-65007748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 73, 110 | 
| Conread position: | 1-144 | 
| Cow position: | chr6:6476669-6476524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 73, 60 | 
| Conread position: | 1-144 | 
| Cow position: | chr6:49520614-49520469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 73, 17 | 
| Conread position: | 1-172 | 
| Cow position: | chr6:13978307-13978479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 73, 107 | 
| Conread position: | 1-280 | 
| Cow position: | chr6:68362535-68362251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 73, 240 | 
| Conread position: | 1-285 | 
| Cow position: | chr6:42723140-42722851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 73, 103 | 
| Conread position: | 1-343 | 
| Cow position: | chr6:39161984-39162320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 73, 84 | 
| Conread position: | 1-364 | 
| Cow position: | chr6:57870219-57869847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 132 | 
| Conread position: | 1-366 | 
| Cow position: | chr6:42927169-42927540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 145 | 
| Conread position: | 1-389 | 
| Cow position: | chr6:48368178-48368556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 73, 218 | 
| Conread position: | 1-396 | 
| Cow position: | chr6:28474492-28474890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 172, 28 | 
| Conread position: | 1-416 | 
| Cow position: | chr6:66231590-66232003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 21 | 
| Conread position: | 1-417 | 
| Cow position: | chr6:11277916-11277488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 247 | 
| Conread position: | 1-427 | 
| Cow position: | chr6:28063122-28063555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 294 | 
| Conread position: | 1-427 | 
| Cow position: | chr6:35433328-35433749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 74, 149 | 
| Conread position: | 1-427 | 
| Cow position: | chr6:37642185-37642600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 73, 96 | 
| Conread position: | 1-431 | 
| Cow position: | chr6:13103843-13104281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 20 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:331681-331242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 35 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:1405452-1405011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 119 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:2554492-2554933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:10558871-10558433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 33 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:13846832-13847259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 176 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:13943696-13944136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 49 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:16051671-16052107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 104 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:17598495-17598052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:26671079-26670631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 254 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:27169361-27169808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 96 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:28491729-28491287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 237 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:43617501-43617942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 173 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:44028832-44029266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 396 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:44150773-44150329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:59919494-59919058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 287 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:65927721-65928163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 253 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:68026566-68027019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 1-444 | 
| Cow position: | chr6:41552806-41553246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 193 | 
| Conread position: | 1-460 | 
| Cow position: | chr6:19453707-19454163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 231 | 
| Conread position: | 1-460 | 
| Cow position: | chr6:33388618-33389090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 453 | 
| Conread position: | 1-465 | 
| Cow position: | chr6:13276587-13277055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 226 | 
| Conread position: | 1-465 | 
| Cow position: | chr6:30478876-30479353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 452 | 
| Conread position: | 1-465 | 
| Cow position: | chr6:33459649-33460117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 155 | 
| Conread position: | 1-495 | 
| Cow position: | chr6:32330993-32330502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 52 | 
| Conread position: | 1-529 | 
| Cow position: | chr6:35420795-35420287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 8 | 
| Conread position: | 1-604 | 
| Cow position: | chr6:37115923-37116532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 212 | 
| Conread position: | 1-604 | 
| Cow position: | chr6:38232060-38232674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 269 | 
| Conread position: | 2-175 | 
| Cow position: | chr6:65909212-65909384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 72, 102 | 
| Conread position: | 2-257 | 
| Cow position: | chr6:2886008-2886256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 185, 71 | 
| Conread position: | 2-422 | 
| Cow position: | chr6:13317700-13317284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 242 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:20561324-20560889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 2-437 | 
| Cow position: | chr6:11402838-11403272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 86, 72 | 
| Conread position: | 3-156 | 
| Cow position: | chr6:47043645-47043489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-169 | 
| Cow position: | chr6:39437427-39437596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-188 | 
| Cow position: | chr6:1823463-1823277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 68, 117 | 
| Conread position: | 3-260 | 
| Cow position: | chr6:50497672-50497407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-268 | 
| Cow position: | chr6:10640915-10641185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 71, 15 | 
| Conread position: | 3-382 | 
| Cow position: | chr6:21971460-21971860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 3-409 | 
| Cow position: | chr6:5951450-5951045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 150 | 
| Conread position: | 3-428 | 
| Cow position: | chr6:36525829-36526266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:701740-702173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 378 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:913415-913876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:3278164-3277727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:3488614-3488176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 353 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:8201519-8201960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 205 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:8761514-8761082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 150 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:27469041-27469470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 31 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:27530216-27529784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 88 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:29311277-29311714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:34893223-34892783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 170 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:35876932-35876495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:40554806-40554364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 368 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:55544540-55544104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 129 | 
| Conread position: | 3-465 | 
| Cow position: | chr6:6566399-6566859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 32 | 
| Conread position: | 3-465 | 
| Cow position: | chr6:15141389-15140925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 171 | 
| Conread position: | 3-465 | 
| Cow position: | chr6:15280755-15280297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 36 | 
| Conread position: | 3-465 | 
| Cow position: | chr6:30275392-30274924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 405 | 
| Conread position: | 3-465 | 
| Cow position: | chr6:65841381-65841842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 193 | 
| Conread position: | 3-499 | 
| Cow position: | chr6:3889693-3889186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 451 | 
| Conread position: | 4-427 | 
| Cow position: | chr6:65880654-65881086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 5-168 | 
| Cow position: | chr6:10054402-10054567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 57, 51 | 
| Conread position: | 5-427 | 
| Cow position: | chr6:65822338-65821907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 5-456 | 
| Cow position: | chr6:65900130-65899653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 215 | 
| Conread position: | 9-432 | 
| Cow position: | chr6:58409120-58408688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 9-435 | 
| Cow position: | chr6:2374496-2374927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 145 | 
| Conread position: | 9-435 | 
| Cow position: | chr6:34127141-34127580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 14-431 | 
| Cow position: | chr6:24238862-24239288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 120 | 
| Conread position: | 17-465 | 
| Cow position: | chr6:43793957-43793500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 18 | 
| Conread position: | 19-435 | 
| Cow position: | chr6:1412133-1411713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 98 | 
| Conread position: | 26-419 | 
| Cow position: | chr6:25214078-25214469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 40 | 
| Conread position: | 90-435 | 
| Cow position: | chr6:32074859-32074508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 50, 43 | 
| Conread position: | 96-435 | 
| Cow position: | chr6:7866869-7866524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 117-435 | 
| Cow position: | chr6:3148908-3149231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 40 | 
| Conread position: | 126-435 | 
| Cow position: | chr6:39908441-39908754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 114 | 
| Conread position: | 178-456 | 
| Cow position: | chr6:40315024-40315292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 51 | 
| Conread position: | 218-428 | 
| Cow position: | chr6:40251672-40251883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 276-556 | 
| Cow position: | chr6:10641228-10641509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 64 | 
| Conread position: | 299-510 | 
| Cow position: | chr6:52805122-52805329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 77, 45 | 
| Conread position: | 312-460 | 
| Cow position: | chr6:12650845-12650701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 329-435 | 
| Cow position: | chr6:40275209-40275315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
