Cow genome map


           Conread name:
           Emb1-C0005196_O14
        

               Conread position:
               1-168
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               186, 76
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 36
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               73, 280
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 294
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 215
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 60
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               180, 36
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 36
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 371
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 112
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 163
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 317
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 134
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 445
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 253
               

               Conread position:
               1-503
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               1-515
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               1-529
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 166
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 122
               

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 307
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 137
               

               Conread position:
               2-188
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 273
               

               Conread position:
               2-351
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 150
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               71, 149
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 116
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 145
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 313
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 387
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 150
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 370
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 434
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 154
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 396
               

               Conread position:
               3-486
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 351
               

               Conread position:
               3-503
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 335
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 204
               

               Conread position:
               5-604
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               6-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               9-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               9-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 360
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 102
               

               Conread position:
               14-322
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               60, 239
               

               Conread position:
               21-431
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               24-460
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 423
               

               Conread position:
               27-454
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               74-409
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 207
               

               Conread position:
               75-503
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 178
               

               Conread position:
               90-604
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               113-471
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               113-586
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 37
               

               Conread position:
               141-392
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               151-435
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               151-503
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               175-604
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               177-432
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               208-450
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               217-494
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               212, 71
               

               Conread position:
               219-602
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 88
               

               Conread position:
               297-428
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               306-528
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               
Show alignments to all cow chromosomes.