Cow genome map


           Conread name:
           Emb1-C0005196_O14
        

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 166
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 150
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 375
               

               Conread position:
               1-412
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 53
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 155
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 143
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 166
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 243
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 173
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 203
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 198
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 278
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 306
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 72
               

               Conread position:
               1-496
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 239
               

               Conread position:
               1-603
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 111
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 56
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 149
               

               Conread position:
               1-604
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               2-269
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               72, 192
               

               Conread position:
               2-572
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               3-176
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 169
               

               Conread position:
               3-179
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 237
               

               Conread position:
               3-392
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-428
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 7
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 425
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 133
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 225
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 141
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 132
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 88
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 254
               

               Conread position:
               3-465
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 181
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 101
               

               Conread position:
               4-450
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 366
               

               Conread position:
               4-459
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               4-460
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 177
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 133
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               6-435
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               7-412
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 333
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 297
               

               Conread position:
               9-604
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               21-604
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               22-435
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 50
               

               Conread position:
               36-432
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               67-438
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               75-435
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               87-379
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 197
               

               Conread position:
               102-431
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               102-431
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 281
               

               Conread position:
               111-435
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 204
               

               Conread position:
               119-511
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 269
               

               Conread position:
               127-431
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               141-391
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               186-464
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 252
               

               Conread position:
               253-604
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 97
               

               Conread position:
               273-432
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               138
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               282-529
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 213
               

               Conread position:
               284-432
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               130
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               342-432
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               342-435
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.