Cow genome map

Conread name: Emb1-C0005196_O14

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 134

Conread position: 1-188
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 1-188
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 1-284
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 70, 278

Conread position: 1-315
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 38

Conread position: 1-337
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-370
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 358

Conread position: 1-377
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 326

Conread position: 1-387
Cow position:
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 154

Conread position: 1-415
Cow position:
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 33

Conread position: 1-429
Cow position:
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 164

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 36

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 439
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 304

Conread position: 1-435
Cow position:
Alignm length: 441
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 455
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-435
Cow position:
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 351

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 301

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 325

Conread position: 1-435
Cow position:
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-450
Cow position:
Alignm length: 460
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 438

Conread position: 1-450
Cow position:
Alignm length: 459
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-471
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 1-486
Cow position:
Alignm length: 502
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 97

Conread position: 1-506
Cow position:
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 92

Conread position: 1-522
Cow position:
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 72, 187

Conread position: 2-229
Cow position:
Alignm length: 231
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 8

Conread position: 2-418
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 71

Conread position: 2-422
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 37

Conread position: 2-431
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 77

Conread position: 3-251
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 58

Conread position: 3-257
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 184, 31

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 3-402
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-415
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 3-422
Cow position:
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 26

Conread position: 3-427
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 77

Conread position: 3-428
Cow position:
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 117

Conread position: 3-429
Cow position:
Alignm length: 437
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 308

Conread position: 3-431
Cow position:
Alignm length: 441
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 318

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 142

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 365

Conread position: 3-431
Cow position:
Alignm length: 436
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 46

Conread position: 3-431
Cow position:
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-431
Cow position:
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 3-431
Cow position:
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 426

Conread position: 3-431
Cow position:
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 31

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 276

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 360

Conread position: 3-435
Cow position:
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-465
Cow position:
Alignm length: 473
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 144

Conread position: 3-465
Cow position:
Alignm length: 471
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 449

Conread position: 4-431
Cow position:
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 149

Conread position: 5-309
Cow position:
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 5-353
Cow position:
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 6-435
Cow position:
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 16

Conread position: 7-466
Cow position:
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 229

Conread position: 7-493
Cow position:
Alignm length: 499
Alignm identity: 314
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 129

Conread position: 10-502
Cow position:
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 56

Conread position: 14-460
Cow position:
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 451

Conread position: 22-435
Cow position:
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 22-435
Cow position:
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 23-167
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 74

Conread position: 26-428
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 253

Conread position: 34-396
Cow position:
Alignm length: 373
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 71

Conread position: 41-590
Cow position:
Alignm length: 568
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 32

Conread position: 67-435
Cow position:
Alignm length: 377
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 98-451
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 136

Conread position: 107-431
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 25

Conread position: 121-497
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 48

Conread position: 127-431
Cow position:
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 140-431
Cow position:
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 173-359
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 203-435
Cow position:
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 204-453
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 73, 31

Conread position: 235-590
Cow position:
Alignm length: 364
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 262

Conread position: 243-532
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 251

Conread position: 255-435
Cow position:
Alignm length: 182
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 263-435
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 124

Conread position: 280-435
Cow position:
Alignm length: 156
Alignm identity: 92
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 306-515
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 128, 190

Conread position: 393-604
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 99

Show alignments to all cow chromosomes.