Cow genome map

Conread name: Emb1-C0005211_E02

Conread position: 3-335
Cow position: chr12:22286159-22286502 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 45

Conread position: 3-335
Cow position: chr12:23378893-23378555 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 5-328
Cow position: chr12:27438913-27439241 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 41

Conread position: 5-331
Cow position: chr12:15231793-15231464 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 112

Conread position: 5-335
Cow position: chr12:1849338-1849681 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 186

Conread position: 5-335
Cow position: chr12:25312942-25313280 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 23

Conread position: 5-336
Cow position: chr12:17663728-17663381 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 6-554
Cow position: chr12:7961035-7961580 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 367
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 24

Conread position: 13-335
Cow position: chr12:43681771-43681438 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 67

Conread position: 105-594
Cow position: chr12:551204-551701 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 381, 348

Conread position: 110-350
Cow position: chr12:8642407-8642170 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 162, 16

Conread position: 195-377
Cow position: chr12:48436082-48436271 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 15

Conread position: 278-594
Cow position: chr12:27929347-27929678 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 180

Conread position: 299-597
Cow position: chr12:24981143-24980831 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 144

Conread position: 326-594
Cow position: chr12:21904753-21904480 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 130

Conread position: 337-594
Cow position: chr12:1774542-1774805 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 148, 76

Conread position: 340-584
Cow position: chr12:1093284-1093025 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 114

Conread position: 341-554
Cow position: chr12:5713342-5713125 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 131

Conread position: 343-594
Cow position: chr12:3716897-3717160 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 74

Conread position: 343-594
Cow position: chr12:21057337-21057594 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 187, 21

Conread position: 344-497
Cow position: chr12:41595597-41595443 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 76

Conread position: 344-553
Cow position: chr12:8774039-8773829 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 112

Conread position: 344-554
Cow position: chr12:19155487-19155698 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 107

Conread position: 344-554
Cow position: chr12:21314056-21314268 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 51

Conread position: 344-554
Cow position: chr12:30687117-30686903 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 113

Conread position: 344-554
Cow position: chr12:33297005-33296794 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 93

Conread position: 344-556
Cow position: chr12:26869882-26870097 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 33

Conread position: 344-557
Cow position: chr12:23378504-23378290 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 112

Conread position: 344-589
Cow position: chr12:23294609-23294353 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 76

Conread position: 344-594
Cow position: chr12:249945-250199 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 104

Conread position: 344-594
Cow position: chr12:1408193-1407939 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 111

Conread position: 344-594
Cow position: chr12:5226609-5226362 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 111

Conread position: 344-594
Cow position: chr12:11582534-11582283 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 20

Conread position: 344-594
Cow position: chr12:15797290-15797044 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 183, 23

Conread position: 344-594
Cow position: chr12:15939503-15939748 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 189, 51

Conread position: 344-594
Cow position: chr12:19871589-19871325 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 113

Conread position: 344-594
Cow position: chr12:20459347-20459605 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 108

Conread position: 344-594
Cow position: chr12:22202306-22202554 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr12:23159135-23159388 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 187, 76

Conread position: 344-594
Cow position: chr12:24557951-24557693 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 48

Conread position: 344-594
Cow position: chr12:27506274-27506536 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 111

Conread position: 344-594
Cow position: chr12:27994476-27994214 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 111

Conread position: 344-594
Cow position: chr12:41337857-41338119 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 111

Conread position: 344-594
Cow position: chr12:48416366-48416631 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 101

Conread position: 344-597
Cow position: chr12:10931460-10931195 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 73

Conread position: 344-597
Cow position: chr12:11101623-11101358 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 96

Conread position: 344-597
Cow position: chr12:15821097-15820840 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 186, 20

Conread position: 344-597
Cow position: chr12:28763639-28763891 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 44

Conread position: 344-597
Cow position: chr12:41973397-41973664 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 86

Conread position: 345-554
Cow position: chr12:25313339-25313552 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 110

Conread position: 345-594
Cow position: chr12:61833-62094 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:259104-258843 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:1007391-1007129 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 111

Conread position: 345-594
Cow position: chr12:5107432-5107171 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:5110690-5110947 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 183, 75

Conread position: 345-594
Cow position: chr12:7674276-7674015 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:10076032-10075775 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 32

Conread position: 345-594
Cow position: chr12:12928536-12928793 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 110

Conread position: 345-594
Cow position: chr12:15925379-15925638 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 75

Conread position: 345-594
Cow position: chr12:16301964-16302225 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:21452603-21452864 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:21888668-21888929 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:22517480-22517738 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 108

Conread position: 345-594
Cow position: chr12:22748590-22748328 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr12:25096891-25097152 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 104

Conread position: 345-594
Cow position: chr12:25148244-25148504 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 140, 75

Conread position: 345-594
Cow position: chr12:27958151-27958412 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:31027446-31027706 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 75

Conread position: 345-594
Cow position: chr12:31829075-31829336 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:32011403-32011664 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 95

Conread position: 345-594
Cow position: chr12:32147255-32147514 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 75

Conread position: 345-594
Cow position: chr12:32656923-32656662 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr12:32758071-32757810 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:33925323-33925584 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:35547754-35548013 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr12:36287641-36287899 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 108

Conread position: 345-594
Cow position: chr12:37562379-37562123 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr12:38893738-38893477 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr12:46111743-46112004 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 110

Conread position: 345-597
Cow position: chr12:28571751-28571494 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 143, 10

Conread position: 345-597
Cow position: chr12:35367774-35367515 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 106

Conread position: 345-597
Cow position: chr12:43681379-43681114 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 140, 87

Conread position: 346-594
Cow position: chr12:18586046-18585786 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 109

Conread position: 347-594
Cow position: chr12:15231403-15231148 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 17

Conread position: 347-597
Cow position: chr12:25265961-25266224 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 108

Conread position: 348-594
Cow position: chr12:21665507-21665249 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 92

Conread position: 349-554
Cow position: chr12:1476291-1476500 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 71

Conread position: 351-594
Cow position: chr12:2242619-2242873 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 104

Conread position: 357-594
Cow position: chr12:27435796-27436036 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 63

Conread position: 367-594
Cow position: chr12:28012879-28013118 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 74

Conread position: 382-554
Cow position: chr12:35311581-35311750 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 38

Show alignments to all cow chromosomes.