Cow genome map

Conread name: Emb1-C0005211_E02

Conread position: 2-332
Cow position: chr18:43430879-43430538 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 255

Conread position: 3-338
Cow position: chr18:43563752-43563413 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 27

Conread position: 4-335
Cow position: chr18:2852912-2853254 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 4-341
Cow position: chr18:2609188-2609536 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 91

Conread position: 5-328
Cow position: chr18:31563069-31563397 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 5-336
Cow position: chr18:7649521-7649184 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 24

Conread position: 5-338
Cow position: chr18:42242464-42242811 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 103, 158

Conread position: 5-352
Cow position: chr18:36649251-36648911 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 77

Conread position: 5-370
Cow position: chr18:4955023-4954641 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 206

Conread position: 6-326
Cow position: chr18:55396361-55396016 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 104, 324

Conread position: 6-335
Cow position: chr18:13508215-13508534 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 24

Conread position: 9-489
Cow position: chr18:48241160-48240682 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 329
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 101, 87

Conread position: 12-328
Cow position: chr18:24293374-24293060 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 85

Conread position: 12-335
Cow position: chr18:6733104-6733431 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 12-335
Cow position: chr18:51679358-51679674 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 129

Conread position: 12-594
Cow position: chr18:11870308-11869701 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 361
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 172

Conread position: 69-335
Cow position: chr18:43466603-43466333 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 154, 38

Conread position: 111-332
Cow position: chr18:23062802-23063034 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 22

Conread position: 114-335
Cow position: chr18:12241575-12241351 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 7

Conread position: 114-335
Cow position: chr18:15324304-15324534 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 13

Conread position: 126-331
Cow position: chr18:16437834-16437627 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 35

Conread position: 152-328
Cow position: chr18:51309622-51309441 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 43

Conread position: 291-594
Cow position: chr18:27539966-27539646 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 169

Conread position: 291-594
Cow position: chr18:37733223-37732904 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 155

Conread position: 344-458
Cow position: chr18:36908384-36908502 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 344-497
Cow position: chr18:6103928-6104078 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 110

Conread position: 344-497
Cow position: chr18:20151083-20150932 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 111

Conread position: 344-520
Cow position: chr18:21303978-21303801 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 111

Conread position: 344-526
Cow position: chr18:37692804-37692993 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 344-548
Cow position: chr18:33851005-33850798 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 110

Conread position: 344-554
Cow position: chr18:29946926-29946720 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 48

Conread position: 344-554
Cow position: chr18:35057501-35057288 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 71

Conread position: 344-554
Cow position: chr18:41837614-41837828 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 111

Conread position: 344-567
Cow position: chr18:17943988-17943761 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 111

Conread position: 344-587
Cow position: chr18:26335685-26335927 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 184, 76

Conread position: 344-594
Cow position: chr18:6733489-6733748 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr18:10113484-10113224 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 141, 43

Conread position: 344-594
Cow position: chr18:10896664-10896414 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 77

Conread position: 344-594
Cow position: chr18:14419453-14419191 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr18:16094361-16094099 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 111

Conread position: 344-594
Cow position: chr18:16173137-16173399 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 73

Conread position: 344-594
Cow position: chr18:17335265-17335521 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 186, 77

Conread position: 344-594
Cow position: chr18:23659419-23659680 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 110

Conread position: 344-594
Cow position: chr18:23701327-23701584 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 74

Conread position: 344-594
Cow position: chr18:23802499-23802237 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr18:28968813-28969075 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 73

Conread position: 344-594
Cow position: chr18:29863128-29863390 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 21

Conread position: 344-594
Cow position: chr18:33607703-33607449 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 20

Conread position: 344-594
Cow position: chr18:35293592-35293333 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 141, 70

Conread position: 344-594
Cow position: chr18:43430481-43430221 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 20

Conread position: 344-595
Cow position: chr18:17323851-17323593 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 51

Conread position: 345-497
Cow position: chr18:46869624-46869479 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 20

Conread position: 345-552
Cow position: chr18:29797610-29797822 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 108

Conread position: 345-586
Cow position: chr18:10221209-10221462 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr18:602989-603250 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 75

Conread position: 345-594
Cow position: chr18:14127811-14128070 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 111

Conread position: 345-594
Cow position: chr18:16463171-16463432 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr18:18215538-18215799 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 95

Conread position: 345-594
Cow position: chr18:23688647-23688386 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 75

Conread position: 345-594
Cow position: chr18:24037371-24037632 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr18:26242984-26243244 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 19

Conread position: 345-594
Cow position: chr18:29071896-29071635 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr18:30607171-30606910 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr18:32164456-32164717 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr18:33522693-33522441 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 64

Conread position: 345-594
Cow position: chr18:37582983-37583243 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 94

Conread position: 345-594
Cow position: chr18:43464297-43464559 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 108

Conread position: 345-594
Cow position: chr18:47745228-47744967 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr18:50092969-50093230 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr18:51602190-51602451 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr18:51654070-51653814 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 140, 91

Conread position: 345-594
Cow position: chr18:55554726-55554465 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 95

Conread position: 346-594
Cow position: chr18:5570004-5569758 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 41

Conread position: 346-594
Cow position: chr18:50834911-50835171 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 94

Conread position: 349-594
Cow position: chr18:1145080-1145328 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 71

Conread position: 357-594
Cow position: chr18:54065611-54065852 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 98

Show alignments to all cow chromosomes.