Cow genome map

Conread name: Emb1-C0005211_E02

Conread position: 3-335
Cow position: chr29:11786790-11786454 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 57

Conread position: 4-334
Cow position: chr29:45650768-45651094 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 77

Conread position: 5-315
Cow position: chr29:12875958-12875639 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 55

Conread position: 5-335
Cow position: chr29:4260926-4260589 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 108, 92

Conread position: 5-335
Cow position: chr29:18072488-18072150 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 189

Conread position: 5-350
Cow position: chr29:40732693-40733039 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 105, 82

Conread position: 5-357
Cow position: chr29:32963096-32962734 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 60

Conread position: 5-594
Cow position: chr29:8667373-8666793 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 180

Conread position: 5-594
Cow position: chr29:13058495-13057871 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 46

Conread position: 5-594
Cow position: chr29:35280353-35280984 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 567

Conread position: 12-326
Cow position: chr29:35076916-35076584 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 12-335
Cow position: chr29:2694487-2694152 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 12-335
Cow position: chr29:4480609-4480939 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 155

Conread position: 12-335
Cow position: chr29:13590157-13590492 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 12-458
Cow position: chr29:13639800-13640257 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 23

Conread position: 14-354
Cow position: chr29:8934840-8934493 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 269

Conread position: 32-332
Cow position: chr29:10841730-10842037 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 78, 57

Conread position: 34-336
Cow position: chr29:19946416-19946735 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 150

Conread position: 36-328
Cow position: chr29:34736944-34737244 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 48-335
Cow position: chr29:12798334-12798034 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 103-335
Cow position: chr29:35291346-35291114 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 149, 114

Conread position: 263-594
Cow position: chr29:21227455-21227107 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 182

Conread position: 326-594
Cow position: chr29:6218398-6218675 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 123

Conread position: 339-564
Cow position: chr29:36633957-36634180 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 146, 78

Conread position: 343-594
Cow position: chr29:19619875-19620137 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 112

Conread position: 343-594
Cow position: chr29:39076325-39076587 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 112

Conread position: 343-597
Cow position: chr29:17408520-17408259 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 109

Conread position: 343-597
Cow position: chr29:21255345-21255089 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 114

Conread position: 344-554
Cow position: chr29:26263016-26262801 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 130

Conread position: 344-554
Cow position: chr29:27259490-27259706 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 98

Conread position: 344-567
Cow position: chr29:20999604-20999385 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 344-588
Cow position: chr29:35739308-35739561 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 113

Conread position: 344-591
Cow position: chr29:35228066-35227803 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 118, 73

Conread position: 344-593
Cow position: chr29:45651150-45651408 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 44

Conread position: 344-594
Cow position: chr29:2837943-2838205 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr29:3584825-3585081 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 141, 71

Conread position: 344-594
Cow position: chr29:6262616-6262878 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr29:6871891-6872143 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 109

Conread position: 344-594
Cow position: chr29:6934876-6934620 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 73

Conread position: 344-594
Cow position: chr29:7427749-7428011 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 105

Conread position: 344-594
Cow position: chr29:7724058-7723804 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 38

Conread position: 344-594
Cow position: chr29:8623815-8624065 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 105

Conread position: 344-594
Cow position: chr29:9079404-9079668 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 76

Conread position: 344-594
Cow position: chr29:9639136-9639399 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 111

Conread position: 344-594
Cow position: chr29:10452423-10452685 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 111

Conread position: 344-594
Cow position: chr29:11786395-11786134 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 111

Conread position: 344-594
Cow position: chr29:13099565-13099304 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 96

Conread position: 344-594
Cow position: chr29:15943741-15943484 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 143, 108

Conread position: 344-594
Cow position: chr29:16101725-16101986 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 142, 75

Conread position: 344-594
Cow position: chr29:20254557-20254297 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 105

Conread position: 344-594
Cow position: chr29:22279765-22279505 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 110

Conread position: 344-594
Cow position: chr29:25929115-25929376 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr29:28696986-28697247 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr29:30432802-30433061 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 39

Conread position: 344-594
Cow position: chr29:32289777-32289522 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 71

Conread position: 344-594
Cow position: chr29:32543531-32543269 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 111

Conread position: 344-594
Cow position: chr29:35273646-35273908 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 141, 73

Conread position: 344-594
Cow position: chr29:38229400-38229138 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 142, 86

Conread position: 344-594
Cow position: chr29:43326907-43326645 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 105

Conread position: 344-594
Cow position: chr29:45462624-45462364 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 17

Conread position: 344-595
Cow position: chr29:5977927-5978188 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 111

Conread position: 344-595
Cow position: chr29:40498483-40498746 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 111

Conread position: 344-597
Cow position: chr29:23980103-23979838 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 104

Conread position: 345-554
Cow position: chr29:34851146-34850936 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 140, 91

Conread position: 345-594
Cow position: chr29:607256-607506 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr29:1478843-1478583 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 76

Conread position: 345-594
Cow position: chr29:3329984-3329723 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:4164080-4163819 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr29:5961395-5961136 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 110

Conread position: 345-594
Cow position: chr29:7604794-7604522 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 19

Conread position: 345-594
Cow position: chr29:10820323-10820584 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 103

Conread position: 345-594
Cow position: chr29:13623982-13624243 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:15072089-15072350 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:16036025-16036286 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:16065102-16064842 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 96

Conread position: 345-594
Cow position: chr29:18010967-18010706 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:22746292-22746031 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 140, 75

Conread position: 345-594
Cow position: chr29:24983179-24983436 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 91

Conread position: 345-594
Cow position: chr29:27702469-27702208 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr29:28656976-28657237 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:31765432-31765171 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr29:32291986-32291725 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:32352987-32352738 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:32556352-32556613 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:38409589-38409326 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 110

Conread position: 345-594
Cow position: chr29:40157136-40156875 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:40294699-40294438 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 345-594
Cow position: chr29:42255586-42255847 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 345-597
Cow position: chr29:21474541-21474276 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 75

Conread position: 346-594
Cow position: chr29:45073-45331 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 71

Conread position: 346-597
Cow position: chr29:32316460-32316204 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 95

Conread position: 347-597
Cow position: chr29:32800658-32800403 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 34

Conread position: 348-563
Cow position: chr29:32732496-32732270 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 348-594
Cow position: chr29:5240785-5240525 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 101

Conread position: 349-590
Cow position: chr29:2745123-2745366 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 182, 44

Conread position: 349-593
Cow position: chr29:43964172-43964425 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 71

Conread position: 363-597
Cow position: chr29:7811823-7812070 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 92

Conread position: 366-594
Cow position: chr29:34794492-34794732 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 76

Conread position: 367-594
Cow position: chr29:4200748-4200509 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 88

Show alignments to all cow chromosomes.