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Cow genome map

           
Conread name:
           
Emb1-C0005211_E05
        

               
Conread position:
               
1-651
               

               
Cow position:
               
chr1:68854400-68855049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
2-622
               

               
Cow position:
               
chr1:81860021-81859385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr1:51393626-51394300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
7-651
               

               
Cow position:
               
chr1:63240148-63240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 223
               

               
Conread position:
               
7-651
               

               
Cow position:
               
chr1:82879886-82880537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
8-414
               

               
Cow position:
               
chr1:29901781-29901379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
71-622
               

               
Cow position:
               
chr1:68275685-68276253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 354
               

               
Conread position:
               
129-512
               

               
Cow position:
               
chr1:97145727-97145349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
133-622
               

               
Cow position:
               
chr1:37887423-37886940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 204
               

               
Conread position:
               
168-622
               

               
Cow position:
               
chr1:82861152-82861621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 119
               

               
Conread position:
               
174-641
               

               
Cow position:
               
chr1:32630381-32630836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
184-621
               

               
Cow position:
               
chr1:43821775-43822222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 191
               

               
Conread position:
               
228-651
               

               
Cow position:
               
chr1:1877472-1877907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
275-651
               

               
Cow position:
               
chr1:81180509-81180097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
412-651
               

               
Cow position:
               
chr1:96365311-96365545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
414-651
               

               
Cow position:
               
chr1:81913512-81913269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
415-648
               

               
Cow position:
               
chr1:21577444-21577680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
421-651
               

               
Cow position:
               
chr1:80987999-80988225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
173, 11
               

               
Conread position:
               
431-633
               

               
Cow position:
               
chr1:13056875-13056671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
432-642
               

               
Cow position:
               
chr1:25610844-25610637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
165, 5
               

               
Conread position:
               
432-649
               

               
Cow position:
               
chr1:71797240-71797030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
165, 5
               

               
Conread position:
               
432-651
               

               
Cow position:
               
chr1:44125992-44125768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
432-651
               

               
Cow position:
               
chr1:95499838-95499613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
436-622
               

               
Cow position:
               
chr1:20147335-20147525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
436-622
               

               
Cow position:
               
chr1:34300888-34300701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
161, 79
               

               
Conread position:
               
436-650
               

               
Cow position:
               
chr1:72813075-72813289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
436-651
               

               
Cow position:
               
chr1:8532554-8532336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
436-651
               

               
Cow position:
               
chr1:61350813-61351030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
436-651
               

               
Cow position:
               
chr1:68912413-68912623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 81
               

               
Conread position:
               
438-622
               

               
Cow position:
               
chr1:31548500-31548683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
438-642
               

               
Cow position:
               
chr1:36879940-36880145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
438-644
               

               
Cow position:
               
chr1:8659310-8659513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
438-651
               

               
Cow position:
               
chr1:53594987-53595200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
440-585
               

               
Cow position:
               
chr1:97231640-97231783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
440-613
               

               
Cow position:
               
chr1:53424856-53425025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
440-622
               

               
Cow position:
               
chr1:40578441-40578624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
440-651
               

               
Cow position:
               
chr1:20204689-20204906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
441-594
               

               
Cow position:
               
chr1:68446133-68445978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
441-594
               

               
Cow position:
               
chr1:98618581-98618733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
441-609
               

               
Cow position:
               
chr1:70828571-70828745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
441-611
               

               
Cow position:
               
chr1:51968135-51968306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-612
               

               
Cow position:
               
chr1:70296933-70297108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
441-612
               

               
Cow position:
               
chr1:84456504-84456674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
441-618
               

               
Cow position:
               
chr1:61392128-61391950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
441-620
               

               
Cow position:
               
chr1:11772416-11772236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-620
               

               
Cow position:
               
chr1:58419589-58419777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
441-621
               

               
Cow position:
               
chr1:5289126-5289309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:20125276-20125458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:21572708-21572890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:25183788-25183972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:32562613-32562431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:33716885-33717068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:35685991-35685809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:42256845-42256661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:48444513-48444338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:53495127-53495310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:61735777-61735592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:71691479-71691661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:73442955-73442773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:79590765-79590947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:85338793-85338974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:92370692-92370515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
441-622
               

               
Cow position:
               
chr1:101973286-101973101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
441-627
               

               
Cow position:
               
chr1:6200234-6200421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
441-627
               

               
Cow position:
               
chr1:23623820-23624016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
441-627
               

               
Cow position:
               
chr1:51980892-51981079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-627
               

               
Cow position:
               
chr1:85361520-85361707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-633
               

               
Cow position:
               
chr1:10071182-10070989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
441-633
               

               
Cow position:
               
chr1:31499292-31499485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
441-633
               

               
Cow position:
               
chr1:94211899-94212091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-642
               

               
Cow position:
               
chr1:37414144-37413946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
441-642
               

               
Cow position:
               
chr1:69695341-69695138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
441-644
               

               
Cow position:
               
chr1:50032312-50032510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-644
               

               
Cow position:
               
chr1:53308727-53308527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-644
               

               
Cow position:
               
chr1:98561764-98561965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 67
               

               
Conread position:
               
441-647
               

               
Cow position:
               
chr1:3340595-3340806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 190
               

               
Conread position:
               
441-648
               

               
Cow position:
               
chr1:82406891-82406674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:3739664-3739871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:4374673-4374462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:40689371-40689592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:54294999-54294780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:76020015-76019816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:76223026-76222814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr1:102266606-102266396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:23634232-23634027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:52496441-52496659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:55135508-55135711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:68782994-68782779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:78783211-78783424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-650
               

               
Cow position:
               
chr1:94226883-94226673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:8349642-8349438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:10719825-10719603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:12222940-12222726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:14528535-14528317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:15311533-15311748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:15547134-15547347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:21092757-21092971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:21460535-21460743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:22628974-22628762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:22730427-22730634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:30034214-30034417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:31348767-31348562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
153, 58
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:31414300-31414082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:34159500-34159713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:37309845-37309635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:39069293-39069076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 204
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:40062113-40062331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:42053660-42053451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:43380358-43380149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:43893593-43893805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:44836567-44836354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:45007135-45007348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:45289206-45288993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:50634746-50634523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:52329862-52329653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:54199715-54199505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:55043364-55043152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:55163590-55163804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:55260765-55260551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:56225143-56225345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:57305496-57305711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:57541834-57541622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:59019438-59019653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:62963948-62964157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:63391107-63390895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:64251400-64251173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:65144807-65144582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:66356044-66355834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:67821553-67821332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
51, 217
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:68253256-68253470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:69264487-69264694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:69539362-69539576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:69941300-69941089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:71325582-71325370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:72104812-72105018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:72304704-72304492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:73960365-73960584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:77620211-77620430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:80336585-80336364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:81161683-81161889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
192, 61
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:81356038-81355827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:82884720-82884511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:84812285-84812054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:86113748-86113532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:88338362-88338578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:89742347-89742136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:89834900-89835109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:90868773-90868560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:91066483-91066274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:91817106-91816891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:95176600-95176818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:95637207-95637422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:98562825-98563042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 67
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:99136765-99136552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:101551122-101551340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:101634370-101634583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:101792431-101792219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
441-651
               

               
Cow position:
               
chr1:102350104-102349876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
442-646
               

               
Cow position:
               
chr1:36997863-36998063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
442-651
               

               
Cow position:
               
chr1:39418452-39418243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
442-651
               

               
Cow position:
               
chr1:61534703-61534489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
442-651
               

               
Cow position:
               
chr1:79002287-79002082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
443-622
               

               
Cow position:
               
chr1:38418745-38418922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
443-634
               

               
Cow position:
               
chr1:57957191-57956999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
443-648
               

               
Cow position:
               
chr1:100421512-100421711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
443-651
               

               
Cow position:
               
chr1:61661645-61661429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
444-613
               

               
Cow position:
               
chr1:101281265-101281095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
444-622
               

               
Cow position:
               
chr1:5562138-5561960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
444-650
               

               
Cow position:
               
chr1:56228920-56229129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
444-651
               

               
Cow position:
               
chr1:3323522-3323740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
444-651
               

               
Cow position:
               
chr1:22467596-22467809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
444-651
               

               
Cow position:
               
chr1:52039305-52039515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
444-651
               

               
Cow position:
               
chr1:54258240-54258442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
150, 55
               

               
Conread position:
               
444-651
               

               
Cow position:
               
chr1:79844137-79844345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
445-612
               

               
Cow position:
               
chr1:51359166-51359001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
445-621
               

               
Cow position:
               
chr1:4026857-4027029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
445-633
               

               
Cow position:
               
chr1:11914203-11914020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
445-644
               

               
Cow position:
               
chr1:57698787-57698588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
445-650
               

               
Cow position:
               
chr1:95017842-95017641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
446-613
               

               
Cow position:
               
chr1:26322841-26322671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
446-616
               

               
Cow position:
               
chr1:4589811-4589642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
446-621
               

               
Cow position:
               
chr1:82504637-82504812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
446-622
               

               
Cow position:
               
chr1:65067282-65067106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
446-622
               

               
Cow position:
               
chr1:75093164-75093341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
446-632
               

               
Cow position:
               
chr1:79632427-79632240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
446-632
               

               
Cow position:
               
chr1:90836333-90836147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
446-637
               

               
Cow position:
               
chr1:76938327-76938135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
446-645
               

               
Cow position:
               
chr1:68282464-68282664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:23969365-23969160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:42874277-42874068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:44136781-44136587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:44769439-44769234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:56073798-56073580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:61564464-61564675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:61725443-61725230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:82378466-82378667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:92963060-92963277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:96963989-96964199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
446-651
               

               
Cow position:
               
chr1:102647599-102647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
447-585
               

               
Cow position:
               
chr1:45244181-45244316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
447-620
               

               
Cow position:
               
chr1:54179343-54179517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 68
               

               
Conread position:
               
447-622
               

               
Cow position:
               
chr1:11226574-11226399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:11873684-11873481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:20384954-20384741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:24202065-24201869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:43211449-43211649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:55357609-55357407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:66429972-66430179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
447-651
               

               
Cow position:
               
chr1:88028962-88029164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
448-651
               

               
Cow position:
               
chr1:12596232-12596025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
449-651
               

               
Cow position:
               
chr1:83651-83856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
449-651
               

               
Cow position:
               
chr1:41696734-41696937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
449-651
               

               
Cow position:
               
chr1:61005889-61005683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
453-615
               

               
Cow position:
               
chr1:22823617-22823777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
453-620
               

               
Cow position:
               
chr1:35162081-35162248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
453-649
               

               
Cow position:
               
chr1:85596623-85596815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
453-651
               

               
Cow position:
               
chr1:56718990-56719199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
460-648
               

               
Cow position:
               
chr1:79663980-79663786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
462-622
               

               
Cow position:
               
chr1:69445060-69445217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
462-626
               

               
Cow position:
               
chr1:98412630-98412792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
462-650
               

               
Cow position:
               
chr1:73584730-73584525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
462-651
               

               
Cow position:
               
chr1:88652317-88652509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
463-651
               

               
Cow position:
               
chr1:75443738-75443539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
464-651
               

               
Cow position:
               
chr1:22448896-22448708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
464-651
               

               
Cow position:
               
chr1:61304369-61304560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
470-651
               

               
Cow position:
               
chr1:1053282-1053464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
483-647
               

               
Cow position:
               
chr1:1956621-1956453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
508-651
               

               
Cow position:
               
chr1:95050371-95050221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
510-627
               

               
Cow position:
               
chr1:84786503-84786622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
532-651
               

               
Cow position:
               
chr1:1348069-1347945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
532-651
               

               
Cow position:
               
chr1:21835703-21835824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
532-651
               

               
Cow position:
               
chr1:75744615-75744739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-622
               

               
Cow position:
               
chr1:55146557-55146648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
533-651
               

               
Cow position:
               
chr1:97806548-97806667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
537-651
               

               
Cow position:
               
chr1:44506728-44506846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
542-651
               

               
Cow position:
               
chr1:49839271-49839386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               
Show alignments to all cow chromosomes.