Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 2-613 |
| Cow position: | chr13:34190431-34191059 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 188 |
| Conread position: | 2-622 |
| Cow position: | chr13:34508640-34508022 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 218 |
| Conread position: | 2-628 |
| Cow position: | chr13:3144020-3143380 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 7-414 |
| Cow position: | chr13:15446819-15446427 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 27 |
| Conread position: | 61-651 |
| Cow position: | chr13:45353753-45353159 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 80-648 |
| Cow position: | chr13:46524744-46525329 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 203 |
| Conread position: | 214-651 |
| Cow position: | chr13:32016976-32017413 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 28 |
| Conread position: | 268-633 |
| Cow position: | chr13:24695884-24695501 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 257 |
| Conread position: | 403-578 |
| Cow position: | chr13:46428450-46428635 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 413-633 |
| Cow position: | chr13:33976023-33975813 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 414-631 |
| Cow position: | chr13:12448635-12448853 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 414-632 |
| Cow position: | chr13:6189277-6189495 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 418-651 |
| Cow position: | chr13:37981401-37981634 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 431-650 |
| Cow position: | chr13:26479880-26480099 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 163, 74 |
| Conread position: | 432-651 |
| Cow position: | chr13:12875649-12875859 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 434-651 |
| Cow position: | chr13:11834148-11834361 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 434-651 |
| Cow position: | chr13:46458970-46458735 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 436-651 |
| Cow position: | chr13:1155376-1155595 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 440-651 |
| Cow position: | chr13:6616420-6616639 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 441-581 |
| Cow position: | chr13:5447829-5447692 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-585 |
| Cow position: | chr13:8651929-8652075 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 441-601 |
| Cow position: | chr13:26822456-26822297 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-609 |
| Cow position: | chr13:20440274-20440442 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 441-613 |
| Cow position: | chr13:889857-890025 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-613 |
| Cow position: | chr13:1570792-1570622 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 45 |
| Conread position: | 441-618 |
| Cow position: | chr13:12045014-12045185 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-620 |
| Cow position: | chr13:17855699-17855521 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 441-620 |
| Cow position: | chr13:28570164-28569980 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 128, 74 |
| Conread position: | 441-622 |
| Cow position: | chr13:1011659-1011477 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:7366118-7366300 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:8635907-8635725 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:9302048-9302229 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:9900631-9900447 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:12977886-12977709 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:15872776-15872594 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 441-622 |
| Cow position: | chr13:18534107-18534288 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:25248817-25248998 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:26073256-26073080 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:32949679-32949858 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:33162882-33163064 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr13:45604085-45604273 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 441-622 |
| Cow position: | chr13:48629315-48629135 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 441-622 |
| Cow position: | chr13:50690065-50690247 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-627 |
| Cow position: | chr13:20537910-20537724 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 441-627 |
| Cow position: | chr13:20666061-20666246 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-632 |
| Cow position: | chr13:12233131-12233322 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 441-633 |
| Cow position: | chr13:47590814-47591012 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 441-637 |
| Cow position: | chr13:51901939-51901742 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-644 |
| Cow position: | chr13:25453497-25453296 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-644 |
| Cow position: | chr13:61170397-61170589 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-645 |
| Cow position: | chr13:42114344-42114145 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 441-648 |
| Cow position: | chr13:34941330-34941537 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 441-649 |
| Cow position: | chr13:16952997-16952790 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 156, 70 |
| Conread position: | 441-649 |
| Cow position: | chr13:33352046-33352252 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-649 |
| Cow position: | chr13:46465549-46465347 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 156, 58 |
| Conread position: | 441-650 |
| Cow position: | chr13:185831-185623 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 441-650 |
| Cow position: | chr13:8362419-8362636 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 441-650 |
| Cow position: | chr13:15869444-15869235 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-650 |
| Cow position: | chr13:20571050-20570844 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 174, 64 |
| Conread position: | 441-650 |
| Cow position: | chr13:52284236-52284022 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:311759-311543 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:971569-971780 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 441-651 |
| Cow position: | chr13:1042629-1042848 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:1767096-1766884 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:7010796-7010578 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 441-651 |
| Cow position: | chr13:8609224-8609438 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 441-651 |
| Cow position: | chr13:13266128-13265920 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-651 |
| Cow position: | chr13:13321107-13320897 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:16015142-16014928 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 182 |
| Conread position: | 441-651 |
| Cow position: | chr13:16247974-16247771 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 441-651 |
| Cow position: | chr13:17613673-17613459 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:17622611-17622394 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:20605792-20606006 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:20683796-20684008 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:20820511-20820723 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 58, 110 |
| Conread position: | 441-651 |
| Cow position: | chr13:21708508-21708293 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:21988778-21988993 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:25062742-25062521 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-651 |
| Cow position: | chr13:25434802-25435007 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:26098469-26098258 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:26382903-26383122 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 441-651 |
| Cow position: | chr13:31814190-31813984 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 441-651 |
| Cow position: | chr13:32151893-32151679 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:32166975-32167192 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 441-651 |
| Cow position: | chr13:33517581-33517811 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 441-651 |
| Cow position: | chr13:33875989-33875777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:34052275-34052488 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:34333625-34333824 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:36264291-36264077 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:36771095-36771306 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:40652260-40652046 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr13:43138902-43139111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:43629437-43629656 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 70, 194 |
| Conread position: | 441-651 |
| Cow position: | chr13:46324462-46324672 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 441-651 |
| Cow position: | chr13:46516389-46516185 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 441-651 |
| Cow position: | chr13:56686758-56686545 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 441-651 |
| Cow position: | chr13:58043955-58043742 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 442-651 |
| Cow position: | chr13:21402469-21402686 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 443-625 |
| Cow position: | chr13:62169219-62169399 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 56 |
| Conread position: | 443-651 |
| Cow position: | chr13:52057863-52057657 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 444-622 |
| Cow position: | chr13:2884374-2884200 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 444-622 |
| Cow position: | chr13:37483946-37484125 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 444-622 |
| Cow position: | chr13:42860249-42860425 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 444-627 |
| Cow position: | chr13:57323779-57323596 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 444-648 |
| Cow position: | chr13:35525890-35526095 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 445-651 |
| Cow position: | chr13:52637604-52637394 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 60 |
| Conread position: | 446-611 |
| Cow position: | chr13:42085129-42084966 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 446-613 |
| Cow position: | chr13:21135410-21135575 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 446-620 |
| Cow position: | chr13:38562266-38562092 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 446-633 |
| Cow position: | chr13:54286448-54286630 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 446-649 |
| Cow position: | chr13:30794142-30793942 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 59 |
| Conread position: | 446-650 |
| Cow position: | chr13:25531468-25531674 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 446-651 |
| Cow position: | chr13:6606698-6606909 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 109, 69 |
| Conread position: | 446-651 |
| Cow position: | chr13:19178595-19178389 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 148, 53 |
| Conread position: | 446-651 |
| Cow position: | chr13:21039281-21039485 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 148, 53 |
| Conread position: | 446-651 |
| Cow position: | chr13:21524747-21524538 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 69 |
| Conread position: | 446-651 |
| Cow position: | chr13:51856316-51856527 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 447-622 |
| Cow position: | chr13:15446363-15446194 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 447-622 |
| Cow position: | chr13:33160695-33160869 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 447-650 |
| Cow position: | chr13:21235368-21235573 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 149, 55 |
| Conread position: | 447-651 |
| Cow position: | chr13:20563319-20563109 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 447-651 |
| Cow position: | chr13:21276177-21275968 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 447-651 |
| Cow position: | chr13:37947694-37947887 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 68 |
| Conread position: | 447-651 |
| Cow position: | chr13:52585702-52585908 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 448-609 |
| Cow position: | chr13:7663109-7663271 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 449-613 |
| Cow position: | chr13:24754203-24754038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 449-651 |
| Cow position: | chr13:20879518-20879718 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 450-650 |
| Cow position: | chr13:57493866-57494069 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 451-651 |
| Cow position: | chr13:56148857-56148650 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 143, 98 |
| Conread position: | 451-651 |
| Cow position: | chr13:56160110-56160317 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 98 |
| Conread position: | 453-645 |
| Cow position: | chr13:8202570-8202758 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 454-609 |
| Cow position: | chr13:37382125-37381968 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 454-651 |
| Cow position: | chr13:18167052-18166846 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 454-651 |
| Cow position: | chr13:23269899-23270098 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 457-622 |
| Cow position: | chr13:20813972-20814135 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 457-622 |
| Cow position: | chr13:20816621-20816458 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 462-622 |
| Cow position: | chr13:45515648-45515809 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 462-633 |
| Cow position: | chr13:5910413-5910581 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 462-651 |
| Cow position: | chr13:13089329-13089132 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 462-651 |
| Cow position: | chr13:14927543-14927348 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 462-651 |
| Cow position: | chr13:20270915-20271101 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 462-651 |
| Cow position: | chr13:60429773-60429961 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 463-651 |
| Cow position: | chr13:55843789-55843596 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 488-632 |
| Cow position: | chr13:38012642-38012497 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 138 |
| Conread position: | 507-633 |
| Cow position: | chr13:22115964-22115838 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 507-633 |
| Cow position: | chr13:24155801-24155675 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 508-651 |
| Cow position: | chr13:37521117-37521267 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 524-648 |
| Cow position: | chr13:26697859-26697984 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 528-651 |
| Cow position: | chr13:21287848-21287974 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 531-651 |
| Cow position: | chr13:23166859-23166983 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 532-651 |
| Cow position: | chr13:8201248-8201373 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 532-651 |
| Cow position: | chr13:25927029-25926905 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.