Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 2-651 |
| Cow position: | chr17:7560426-7559754 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 2-651 |
| Cow position: | chr17:20091349-20090708 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 7-622 |
| Cow position: | chr17:1708478-1707821 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 189 |
| Conread position: | 90-651 |
| Cow position: | chr17:18472545-18473092 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 174 |
| Conread position: | 146-650 |
| Cow position: | chr17:24823638-24824161 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 292 |
| Conread position: | 163-628 |
| Cow position: | chr17:18036580-18036100 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 187-651 |
| Cow position: | chr17:17179468-17179942 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 219 |
| Conread position: | 191-414 |
| Cow position: | chr17:14034240-14034006 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 231-641 |
| Cow position: | chr17:38832523-38832942 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 251-651 |
| Cow position: | chr17:23880320-23879909 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 411-651 |
| Cow position: | chr17:15664337-15664581 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 412-651 |
| Cow position: | chr17:25900870-25901110 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 182, 25 |
| Conread position: | 431-651 |
| Cow position: | chr17:36265543-36265331 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 432-613 |
| Cow position: | chr17:30539558-30539375 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 432-627 |
| Cow position: | chr17:23723568-23723771 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 433-633 |
| Cow position: | chr17:21973441-21973241 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 435-648 |
| Cow position: | chr17:38614653-38614866 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 159, 76 |
| Conread position: | 435-651 |
| Cow position: | chr17:2006396-2006615 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 438-621 |
| Cow position: | chr17:25145614-25145428 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 441-585 |
| Cow position: | chr17:18266761-18266902 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 441-618 |
| Cow position: | chr17:14050493-14050316 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 441-619 |
| Cow position: | chr17:13409653-13409477 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 441-620 |
| Cow position: | chr17:2270467-2270647 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-620 |
| Cow position: | chr17:20129378-20129556 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 441-620 |
| Cow position: | chr17:27580370-27580542 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 441-621 |
| Cow position: | chr17:9853685-9853866 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-621 |
| Cow position: | chr17:9936459-9936280 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-622 |
| Cow position: | chr17:5730623-5730805 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-622 |
| Cow position: | chr17:6263607-6263789 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 441-622 |
| Cow position: | chr17:10529042-10528860 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 441-622 |
| Cow position: | chr17:20889074-20889255 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-622 |
| Cow position: | chr17:21874617-21874436 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 441-622 |
| Cow position: | chr17:23101508-23101330 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-622 |
| Cow position: | chr17:26514414-26514596 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-622 |
| Cow position: | chr17:35184733-35184916 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-622 |
| Cow position: | chr17:43992234-43992416 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 152, 74 |
| Conread position: | 441-626 |
| Cow position: | chr17:10473534-10473713 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-627 |
| Cow position: | chr17:22135198-22135381 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-627 |
| Cow position: | chr17:40802511-40802700 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-628 |
| Cow position: | chr17:6155740-6155926 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-632 |
| Cow position: | chr17:3498965-3498772 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-632 |
| Cow position: | chr17:27667495-27667305 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-632 |
| Cow position: | chr17:29074642-29074446 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 441-633 |
| Cow position: | chr17:5280943-5280751 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-634 |
| Cow position: | chr17:242043-242238 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 441-648 |
| Cow position: | chr17:11618279-11618494 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-648 |
| Cow position: | chr17:20233926-20234138 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-648 |
| Cow position: | chr17:36746613-36746415 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 441-649 |
| Cow position: | chr17:2274973-2275181 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-649 |
| Cow position: | chr17:6566178-6566378 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 153, 43 |
| Conread position: | 441-649 |
| Cow position: | chr17:14003528-14003729 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 441-649 |
| Cow position: | chr17:27053470-27053685 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 441-650 |
| Cow position: | chr17:11913001-11912788 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 67 |
| Conread position: | 441-650 |
| Cow position: | chr17:12289720-12289503 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-650 |
| Cow position: | chr17:32651315-32651528 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-650 |
| Cow position: | chr17:33288955-33288742 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 441-650 |
| Cow position: | chr17:43142021-43141806 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 441-651 |
| Cow position: | chr17:1061359-1061146 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 441-651 |
| Cow position: | chr17:8926529-8926303 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-651 |
| Cow position: | chr17:9748469-9748677 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:10649548-10649758 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:11035621-11035836 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 441-651 |
| Cow position: | chr17:11056680-11056458 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 441-651 |
| Cow position: | chr17:11171495-11171709 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:11304733-11304949 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:12059394-12059181 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 441-651 |
| Cow position: | chr17:13922177-13922392 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:14033948-14033727 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:15103181-15102971 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:15363863-15363649 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 67 |
| Conread position: | 441-651 |
| Cow position: | chr17:16117732-16117510 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 441-651 |
| Cow position: | chr17:17983074-17982864 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 182, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:18861019-18860810 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 111, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:20083813-20083603 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-651 |
| Cow position: | chr17:21495076-21495289 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:22057474-22057260 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:23063413-23063625 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:24077105-24077315 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:24549869-24550087 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:25542113-25541900 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:25875108-25875322 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 441-651 |
| Cow position: | chr17:26182921-26183132 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 441-651 |
| Cow position: | chr17:26764716-26764921 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 148, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:27679545-27679327 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:29715487-29715273 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-651 |
| Cow position: | chr17:30529837-30529628 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 91, 53 |
| Conread position: | 441-651 |
| Cow position: | chr17:32457881-32457666 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 441-651 |
| Cow position: | chr17:32989192-32989395 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:32993914-32993705 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:34079399-34079190 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-651 |
| Cow position: | chr17:34628786-34628568 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 442-622 |
| Cow position: | chr17:1456536-1456353 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 442-647 |
| Cow position: | chr17:5246585-5246804 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 65 |
| Conread position: | 442-651 |
| Cow position: | chr17:21680468-21680685 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 443-623 |
| Cow position: | chr17:10423762-10423948 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 443-651 |
| Cow position: | chr17:18592139-18592357 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 444-613 |
| Cow position: | chr17:17240263-17240081 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 175 |
| Conread position: | 444-622 |
| Cow position: | chr17:40289298-40289121 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 61 |
| Conread position: | 444-633 |
| Cow position: | chr17:26771652-26771465 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 444-651 |
| Cow position: | chr17:18490238-18490448 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 444-651 |
| Cow position: | chr17:25815310-25815517 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 444-651 |
| Cow position: | chr17:29472184-29472382 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 140, 40 |
| Conread position: | 445-649 |
| Cow position: | chr17:24503552-24503754 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 445-650 |
| Cow position: | chr17:27697989-27697789 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 446-613 |
| Cow position: | chr17:38829788-38829955 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 446-644 |
| Cow position: | chr17:27795352-27795550 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 446-647 |
| Cow position: | chr17:24973654-24973861 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 446-649 |
| Cow position: | chr17:20993336-20993129 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 446-650 |
| Cow position: | chr17:11386220-11386426 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 446-650 |
| Cow position: | chr17:11839405-11839613 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 446-651 |
| Cow position: | chr17:1410542-1410326 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 446-651 |
| Cow position: | chr17:1493452-1493242 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 446-651 |
| Cow position: | chr17:3154065-3153855 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 446-651 |
| Cow position: | chr17:5224107-5224310 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 446-651 |
| Cow position: | chr17:11382011-11381805 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 142, 59 |
| Conread position: | 446-651 |
| Cow position: | chr17:20780222-20780424 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 46 |
| Conread position: | 446-651 |
| Cow position: | chr17:26084737-26084947 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 447-613 |
| Cow position: | chr17:11216175-11216011 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 447-648 |
| Cow position: | chr17:4606677-4606871 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 147, 64 |
| Conread position: | 447-651 |
| Cow position: | chr17:923585-923788 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 447-651 |
| Cow position: | chr17:3387002-3387195 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 447-651 |
| Cow position: | chr17:3781741-3781958 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 448-621 |
| Cow position: | chr17:40421375-40421548 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 449-633 |
| Cow position: | chr17:40331476-40331657 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 449-644 |
| Cow position: | chr17:25168020-25168210 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 449-649 |
| Cow position: | chr17:34317010-34316794 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 108 |
| Conread position: | 453-627 |
| Cow position: | chr17:8644748-8644922 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 453-651 |
| Cow position: | chr17:25188994-25189190 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 455-650 |
| Cow position: | chr17:8832391-8832189 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 455-651 |
| Cow position: | chr17:25740663-25740865 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 462-623 |
| Cow position: | chr17:3843212-3843367 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 462-650 |
| Cow position: | chr17:6936944-6936752 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 462-651 |
| Cow position: | chr17:18720724-18720540 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 463-633 |
| Cow position: | chr17:4085425-4085595 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 131, 42 |
| Conread position: | 463-651 |
| Cow position: | chr17:21313094-21312897 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 36, 183 |
| Conread position: | 464-651 |
| Cow position: | chr17:8544030-8544219 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 466-651 |
| Cow position: | chr17:3095553-3095742 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 489-651 |
| Cow position: | chr17:27162390-27162565 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 511-649 |
| Cow position: | chr17:21004064-21003917 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 532-648 |
| Cow position: | chr17:11832347-11832231 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 532-650 |
| Cow position: | chr17:11281318-11281195 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 536-651 |
| Cow position: | chr17:6624051-6624171 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 537-651 |
| Cow position: | chr17:21243992-21243870 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 17 |
Show alignments to all cow chromosomes.