Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 1-651 |
| Cow position: | chr21:24606658-24607326 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 62 |
| Conread position: | 7-411 |
| Cow position: | chr21:33349954-33350362 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 351 |
| Conread position: | 24-651 |
| Cow position: | chr21:2366623-2367270 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 33-651 |
| Cow position: | chr21:5418160-5418797 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 137 |
| Conread position: | 183-622 |
| Cow position: | chr21:31690931-31691382 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 262-649 |
| Cow position: | chr21:912445-912033 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 121, 86 |
| Conread position: | 281-651 |
| Cow position: | chr21:642881-643264 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 242 |
| Conread position: | 397-651 |
| Cow position: | chr21:42023814-42024058 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 198, 31 |
| Conread position: | 410-622 |
| Cow position: | chr21:33729126-33729338 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 420-633 |
| Cow position: | chr21:19766557-19766769 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 8 |
| Conread position: | 423-651 |
| Cow position: | chr21:2359597-2359826 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 174, 13 |
| Conread position: | 429-612 |
| Cow position: | chr21:2904753-2904566 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 435-651 |
| Cow position: | chr21:32237015-32237230 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 436-612 |
| Cow position: | chr21:17511496-17511668 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 436-622 |
| Cow position: | chr21:23672463-23672646 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 436-651 |
| Cow position: | chr21:18713003-18713219 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 160, 69 |
| Conread position: | 438-651 |
| Cow position: | chr21:23192799-23192578 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 156, 77 |
| Conread position: | 440-622 |
| Cow position: | chr21:703445-703262 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 440-622 |
| Cow position: | chr21:24864876-24865060 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 440-633 |
| Cow position: | chr21:2420226-2420417 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 440-651 |
| Cow position: | chr21:8546496-8546272 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 441-592 |
| Cow position: | chr21:32574453-32574605 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 441-609 |
| Cow position: | chr21:29225337-29225171 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 441-612 |
| Cow position: | chr21:23606396-23606568 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-613 |
| Cow position: | chr21:27099-27272 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 441-613 |
| Cow position: | chr21:612045-611874 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-613 |
| Cow position: | chr21:48638024-48637851 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-615 |
| Cow position: | chr21:29954705-29954531 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-620 |
| Cow position: | chr21:22855941-22856116 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:725168-724988 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:3782822-3783004 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:11707028-11706848 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 441-622 |
| Cow position: | chr21:11740409-11740227 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 441-622 |
| Cow position: | chr21:19702246-19702428 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:23900085-23899903 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:23984562-23984380 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:29954942-29955124 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-622 |
| Cow position: | chr21:30231978-30231798 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:30626461-30626282 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-622 |
| Cow position: | chr21:31158977-31159160 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 441-622 |
| Cow position: | chr21:33235520-33235702 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-622 |
| Cow position: | chr21:39061570-39061753 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 441-622 |
| Cow position: | chr21:42464119-42463937 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 441-627 |
| Cow position: | chr21:17218891-17218710 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 29 |
| Conread position: | 441-628 |
| Cow position: | chr21:48262857-48263042 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 441-633 |
| Cow position: | chr21:21170220-21170027 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-634 |
| Cow position: | chr21:40267106-40266914 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-638 |
| Cow position: | chr21:28442456-28442662 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 194 |
| Conread position: | 441-642 |
| Cow position: | chr21:16789443-16789644 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 64 |
| Conread position: | 441-645 |
| Cow position: | chr21:46777251-46777050 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 441-647 |
| Cow position: | chr21:5595386-5595590 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-648 |
| Cow position: | chr21:37299187-37299402 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 74 |
| Conread position: | 441-648 |
| Cow position: | chr21:47760499-47760712 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-649 |
| Cow position: | chr21:7672855-7673060 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 441-649 |
| Cow position: | chr21:47802540-47802326 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 441-650 |
| Cow position: | chr21:20588753-20588964 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-650 |
| Cow position: | chr21:31278504-31278713 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-650 |
| Cow position: | chr21:44565983-44565772 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 166 |
| Conread position: | 441-650 |
| Cow position: | chr21:46912266-46912473 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:4080076-4080292 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:4998763-4998550 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:7582183-7581970 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:12153855-12154073 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:12366109-12366323 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 441-651 |
| Cow position: | chr21:13300874-13301087 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:15584677-15584483 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 441-651 |
| Cow position: | chr21:15742375-15742163 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:15976363-15976568 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 66 |
| Conread position: | 441-651 |
| Cow position: | chr21:17282425-17282639 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:18289385-18289600 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 441-651 |
| Cow position: | chr21:23683272-23683484 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:24858033-24858251 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:25127332-25127537 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 183, 58 |
| Conread position: | 441-651 |
| Cow position: | chr21:27230070-27229858 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:27341868-27341668 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 153, 62 |
| Conread position: | 441-651 |
| Cow position: | chr21:28734190-28733976 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:28993904-28993686 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:29069606-29069393 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:31576236-31576446 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:31702234-31702020 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 167, 73 |
| Conread position: | 441-651 |
| Cow position: | chr21:34391244-34391039 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 441-651 |
| Cow position: | chr21:34738320-34738535 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:36163241-36163027 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:38120825-38121037 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:39401322-39401530 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:40265555-40265768 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:41974657-41974439 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr21:42540498-42540280 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:42914024-42913808 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-651 |
| Cow position: | chr21:48291308-48291105 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 442-651 |
| Cow position: | chr21:5649629-5649841 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 443-612 |
| Cow position: | chr21:41040589-41040761 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 443-651 |
| Cow position: | chr21:28998183-28997966 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 444-612 |
| Cow position: | chr21:21480454-21480289 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 444-620 |
| Cow position: | chr21:363380-363548 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 444-622 |
| Cow position: | chr21:7564597-7564419 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 444-644 |
| Cow position: | chr21:5566716-5566914 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 131, 61 |
| Conread position: | 444-644 |
| Cow position: | chr21:6764977-6764781 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 444-644 |
| Cow position: | chr21:33209924-33210121 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 445-622 |
| Cow position: | chr21:42500757-42500936 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 445-648 |
| Cow position: | chr21:23478990-23478786 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 149, 18 |
| Conread position: | 445-650 |
| Cow position: | chr21:18783957-18783749 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 445-651 |
| Cow position: | chr21:25344604-25344807 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 446-595 |
| Cow position: | chr21:6623875-6624017 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 446-595 |
| Cow position: | chr21:27712709-27712557 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 446-606 |
| Cow position: | chr21:26097683-26097523 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 446-613 |
| Cow position: | chr21:33419989-33419822 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 446-620 |
| Cow position: | chr21:41155589-41155762 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 446-622 |
| Cow position: | chr21:641311-641486 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 446-622 |
| Cow position: | chr21:44671480-44671657 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 446-633 |
| Cow position: | chr21:39700349-39700161 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 446-649 |
| Cow position: | chr21:20045040-20044840 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 446-649 |
| Cow position: | chr21:23293428-23293227 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 446-649 |
| Cow position: | chr21:24297036-24296835 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:4399528-4399733 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 446-651 |
| Cow position: | chr21:8985276-8985482 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:11759737-11759528 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:20925778-20925571 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 446-651 |
| Cow position: | chr21:23821895-23822103 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 446-651 |
| Cow position: | chr21:27743468-27743679 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 446-651 |
| Cow position: | chr21:28429177-28429385 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 446-651 |
| Cow position: | chr21:29214428-29214215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:33263578-33263785 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:37479686-37479895 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 446-651 |
| Cow position: | chr21:39889017-39888812 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 447-622 |
| Cow position: | chr21:19196440-19196263 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 447-650 |
| Cow position: | chr21:42414371-42414165 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 447-651 |
| Cow position: | chr21:48484712-48484516 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 448-611 |
| Cow position: | chr21:17412563-17412399 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 60 |
| Conread position: | 449-635 |
| Cow position: | chr21:81800-81991 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 449-651 |
| Cow position: | chr21:44514995-44515199 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 175 |
| Conread position: | 450-648 |
| Cow position: | chr21:22719049-22718846 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 450-649 |
| Cow position: | chr21:40058536-40058739 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 453-622 |
| Cow position: | chr21:5392804-5392639 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 454-651 |
| Cow position: | chr21:10727016-10727213 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 455-647 |
| Cow position: | chr21:33350481-33350678 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 139, 50 |
| Conread position: | 462-640 |
| Cow position: | chr21:30607360-30607166 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 463-651 |
| Cow position: | chr21:36819479-36819277 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 465-651 |
| Cow position: | chr21:13128351-13128158 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 466-651 |
| Cow position: | chr21:24945150-24944961 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 175 |
| Conread position: | 477-651 |
| Cow position: | chr21:35899565-35899746 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 524-651 |
| Cow position: | chr21:3381277-3381149 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 532-651 |
| Cow position: | chr21:17193948-17193824 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 532-651 |
| Cow position: | chr21:31676310-31676432 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 552-651 |
| Cow position: | chr21:10000912-10001010 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 84 |
Show alignments to all cow chromosomes.