Cow genome map

Conread name: Emb1-C0005211_E05

Conread position: 109-424
Cow position: chr29:11633879-11634183 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 22

Conread position: 183-593
Cow position: chr29:5187410-5186979 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 140

Conread position: 195-633
Cow position: chr29:25423219-25423674 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 284-651
Cow position: chr29:3704709-3704333 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 164

Conread position: 403-595
Cow position: chr29:7664146-7663943 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 413-651
Cow position: chr29:17543077-17543321 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 97

Conread position: 413-651
Cow position: chr29:32808222-32808465 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 96

Conread position: 431-614
Cow position: chr29:26415746-26415932 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 86

Conread position: 432-651
Cow position: chr29:12798581-12798791 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 164, 5

Conread position: 436-622
Cow position: chr29:13017738-13017552 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 69

Conread position: 436-648
Cow position: chr29:32290254-32290470 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 79

Conread position: 436-649
Cow position: chr29:21528954-21529155 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 193, 63

Conread position: 440-590
Cow position: chr29:32176417-32176561 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 441-595
Cow position: chr29:23240170-23240322 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 64

Conread position: 441-605
Cow position: chr29:24345807-24345642 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 74

Conread position: 441-607
Cow position: chr29:4875247-4875079 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 62

Conread position: 441-613
Cow position: chr29:9332801-9332974 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 153, 74

Conread position: 441-613
Cow position: chr29:10674671-10674842 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 64

Conread position: 441-613
Cow position: chr29:34745997-34745824 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 74

Conread position: 441-620
Cow position: chr29:29589257-29589077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 146, 64

Conread position: 441-622
Cow position: chr29:528633-528451 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 64

Conread position: 441-622
Cow position: chr29:8935142-8935324 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 71

Conread position: 441-622
Cow position: chr29:28883737-28883918 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 153, 74

Conread position: 441-622
Cow position: chr29:37785529-37785340 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 441-622
Cow position: chr29:38910347-38910165 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 64

Conread position: 441-623
Cow position: chr29:13127451-13127270 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 11

Conread position: 441-623
Cow position: chr29:18748924-18748747 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 153, 68

Conread position: 441-630
Cow position: chr29:10156632-10156449 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 441-632
Cow position: chr29:14888778-14888969 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 158, 74

Conread position: 441-632
Cow position: chr29:28689267-28689459 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 64

Conread position: 441-637
Cow position: chr29:20429312-20429119 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 153, 64

Conread position: 441-642
Cow position: chr29:17131960-17131747 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 441-642
Cow position: chr29:21196993-21196794 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 64

Conread position: 441-642
Cow position: chr29:31786335-31786536 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 74

Conread position: 441-644
Cow position: chr29:5948130-5947923 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 64

Conread position: 441-647
Cow position: chr29:29974701-29974911 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 151, 47

Conread position: 441-648
Cow position: chr29:2415150-2414948 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 153, 70

Conread position: 441-648
Cow position: chr29:9686352-9686134 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 179

Conread position: 441-648
Cow position: chr29:23874114-23874327 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 73

Conread position: 441-649
Cow position: chr29:26017854-26017641 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 61

Conread position: 441-649
Cow position: chr29:26263512-26263719 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 152, 64

Conread position: 441-649
Cow position: chr29:30028774-30028568 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 88, 64

Conread position: 441-650
Cow position: chr29:7666372-7666161 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 67

Conread position: 441-651
Cow position: chr29:133847-134068 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 76

Conread position: 441-651
Cow position: chr29:6293807-6293605 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 441-651
Cow position: chr29:9638655-9638447 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 64

Conread position: 441-651
Cow position: chr29:15944226-15944441 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr29:16609397-16609612 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 72

Conread position: 441-651
Cow position: chr29:18085232-18085464 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 441-651
Cow position: chr29:19756105-19756318 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 64

Conread position: 441-651
Cow position: chr29:21665632-21665841 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr29:29066084-29066297 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 49

Conread position: 441-651
Cow position: chr29:29632280-29632062 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr29:32732991-32733189 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 153, 63

Conread position: 441-651
Cow position: chr29:35281160-35281367 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 58

Conread position: 441-651
Cow position: chr29:36216776-36216988 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 153, 65

Conread position: 441-651
Cow position: chr29:39567343-39567558 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 64

Conread position: 441-651
Cow position: chr29:40096622-40096831 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr29:40117228-40117434 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 68, 76

Conread position: 441-651
Cow position: chr29:40903062-40902849 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr29:41811917-41811711 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 55

Conread position: 442-649
Cow position: chr29:45005958-45005754 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 63

Conread position: 442-651
Cow position: chr29:24952344-24952559 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 63

Conread position: 443-651
Cow position: chr29:11684664-11684880 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 79

Conread position: 444-615
Cow position: chr29:37617815-37617979 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 139, 58

Conread position: 444-622
Cow position: chr29:465739-465562 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 55

Conread position: 444-651
Cow position: chr29:87353-87147 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 150, 67

Conread position: 444-651
Cow position: chr29:2744612-2744401 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 61

Conread position: 444-651
Cow position: chr29:20674148-20673931 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 70

Conread position: 444-651
Cow position: chr29:32308664-32308452 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 71

Conread position: 445-644
Cow position: chr29:1582964-1582769 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 45

Conread position: 446-606
Cow position: chr29:31899358-31899200 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 41

Conread position: 446-633
Cow position: chr29:4327157-4327341 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 59

Conread position: 446-651
Cow position: chr29:1933898-1933686 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 83, 71

Conread position: 446-651
Cow position: chr29:6014759-6014972 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 146

Conread position: 447-577
Cow position: chr29:28503756-28503884 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 58

Conread position: 447-625
Cow position: chr29:7560738-7560559 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 58

Conread position: 447-633
Cow position: chr29:21443681-21443494 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 58

Conread position: 447-651
Cow position: chr29:686528-686321 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 58

Conread position: 447-651
Cow position: chr29:9911825-9912043 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 180

Conread position: 447-651
Cow position: chr29:17408997-17409202 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 138, 47

Conread position: 447-651
Cow position: chr29:24623905-24624122 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 16

Conread position: 448-624
Cow position: chr29:10058863-10058685 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 144, 67

Conread position: 449-622
Cow position: chr29:26616071-26615886 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 449-633
Cow position: chr29:27846171-27846353 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 174, 56

Conread position: 453-651
Cow position: chr29:6635773-6635968 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 52

Conread position: 453-651
Cow position: chr29:6925691-6925883 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 52

Conread position: 457-651
Cow position: chr29:20178457-20178255 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 66

Conread position: 466-651
Cow position: chr29:26559835-26559654 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 33

Conread position: 467-651
Cow position: chr29:4328117-4328295 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 62, 38

Conread position: 507-651
Cow position: chr29:2984609-2984755 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 51

Conread position: 521-651
Cow position: chr29:31928715-31928852 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 55

Conread position: 522-648
Cow position: chr29:41747177-41747305 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 21

Conread position: 532-649
Cow position: chr29:109457-109576 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 22

Conread position: 538-651
Cow position: chr29:36183029-36183146 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 16

Conread position: 548-651
Cow position: chr29:4520098-4520206 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.