Cow genome map

Conread name: Emb1-C0005211_E05

Conread position: 1-633
Cow position: chr5:24221227-24221863 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 65

Conread position: 7-497
Cow position: chr5:46676851-46677348 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 175

Conread position: 7-647
Cow position: chr5:39936337-39936996 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 337

Conread position: 34-416
Cow position: chr5:6287082-6286715 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 77-651
Cow position: chr5:42671719-42671142 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 162-651
Cow position: chr5:9090631-9090122 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 190

Conread position: 182-649
Cow position: chr5:29770913-29771414 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 353

Conread position: 186-642
Cow position: chr5:54126487-54126963 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 215-430
Cow position: chr5:64823871-64823660 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 209, 133

Conread position: 220-649
Cow position: chr5:70102369-70101912 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 129

Conread position: 416-650
Cow position: chr5:15462387-15462606 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 178, 13

Conread position: 432-595
Cow position: chr5:21040298-21040137 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 432-612
Cow position: chr5:60447920-60448101 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 5

Conread position: 432-651
Cow position: chr5:6986834-6987061 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 162, 5

Conread position: 432-651
Cow position: chr5:30486927-30487134 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 203, 5

Conread position: 436-621
Cow position: chr5:12315996-12316179 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 158, 69

Conread position: 436-651
Cow position: chr5:25928007-25927796 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 73

Conread position: 436-651
Cow position: chr5:28247855-28248075 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 160, 69

Conread position: 436-651
Cow position: chr5:38853038-38853261 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 79

Conread position: 437-595
Cow position: chr5:46513317-46513159 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 62

Conread position: 441-585
Cow position: chr5:3639843-3639687 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 441-585
Cow position: chr5:7921698-7921552 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 441-594
Cow position: chr5:65312656-65312805 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 441-595
Cow position: chr5:33087908-33088061 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 58

Conread position: 441-595
Cow position: chr5:35762974-35763127 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 64

Conread position: 441-595
Cow position: chr5:40423328-40423479 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 64

Conread position: 441-596
Cow position: chr5:47857308-47857466 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 77

Conread position: 441-602
Cow position: chr5:66972086-66972248 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 58

Conread position: 441-608
Cow position: chr5:4166354-4166523 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 64

Conread position: 441-611
Cow position: chr5:34115332-34115517 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 441-612
Cow position: chr5:14420661-14420489 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 74

Conread position: 441-613
Cow position: chr5:44797031-44796862 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 153, 64

Conread position: 441-613
Cow position: chr5:66366218-66366387 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 64

Conread position: 441-620
Cow position: chr5:24919193-24919013 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 74

Conread position: 441-620
Cow position: chr5:36679762-36679576 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 76

Conread position: 441-622
Cow position: chr5:15363577-15363756 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 153, 64

Conread position: 441-622
Cow position: chr5:20555065-20554884 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 64

Conread position: 441-622
Cow position: chr5:21944065-21944248 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 64

Conread position: 441-622
Cow position: chr5:27403556-27403377 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 70

Conread position: 441-622
Cow position: chr5:31053105-31053286 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 64

Conread position: 441-622
Cow position: chr5:34288783-34288605 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 156, 64

Conread position: 441-622
Cow position: chr5:39284597-39284412 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 67

Conread position: 441-622
Cow position: chr5:45846009-45845830 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 64

Conread position: 441-622
Cow position: chr5:47756452-47756634 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 64

Conread position: 441-622
Cow position: chr5:50645768-50645588 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 64

Conread position: 441-622
Cow position: chr5:54337607-54337789 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 65

Conread position: 441-627
Cow position: chr5:17027782-17027965 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 64

Conread position: 441-627
Cow position: chr5:18127324-18127515 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 73

Conread position: 441-627
Cow position: chr5:48535492-48535679 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 24

Conread position: 441-632
Cow position: chr5:709442-709254 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 74

Conread position: 441-632
Cow position: chr5:19969348-19969158 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 64

Conread position: 441-632
Cow position: chr5:22737789-22737979 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 65

Conread position: 441-633
Cow position: chr5:3204522-3204710 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 71

Conread position: 441-633
Cow position: chr5:21004990-21004797 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 65

Conread position: 441-633
Cow position: chr5:60715671-60715478 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 53

Conread position: 441-642
Cow position: chr5:694265-694470 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 112

Conread position: 441-643
Cow position: chr5:39299212-39299411 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 74

Conread position: 441-643
Cow position: chr5:63103595-63103795 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 156, 73

Conread position: 441-644
Cow position: chr5:10261558-10261354 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 82

Conread position: 441-644
Cow position: chr5:44054351-44054153 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 64

Conread position: 441-644
Cow position: chr5:55068405-55068591 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 58

Conread position: 441-645
Cow position: chr5:39675759-39675558 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 153, 64

Conread position: 441-645
Cow position: chr5:50729183-50729384 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 63

Conread position: 441-647
Cow position: chr5:4218565-4218769 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 46

Conread position: 441-648
Cow position: chr5:57935429-57935214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 61

Conread position: 441-649
Cow position: chr5:12149230-12149438 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 64

Conread position: 441-649
Cow position: chr5:15112546-15112340 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 156, 74

Conread position: 441-649
Cow position: chr5:35145034-35145245 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 80, 64

Conread position: 441-649
Cow position: chr5:46510184-46509970 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 58

Conread position: 441-650
Cow position: chr5:19470499-19470286 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 64

Conread position: 441-650
Cow position: chr5:34442109-34441894 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 74

Conread position: 441-650
Cow position: chr5:37942109-37941893 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 66

Conread position: 441-650
Cow position: chr5:39447851-39447633 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 67

Conread position: 441-650
Cow position: chr5:46130096-46129884 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 64

Conread position: 441-650
Cow position: chr5:47704451-47704233 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 123, 74

Conread position: 441-650
Cow position: chr5:50573441-50573654 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 153, 67

Conread position: 441-650
Cow position: chr5:74643975-74643774 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 163, 10

Conread position: 441-651
Cow position: chr5:1105176-1104969 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr5:3281184-3280973 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 154, 74

Conread position: 441-651
Cow position: chr5:5938008-5938222 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:6528364-6528580 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:7193116-7193329 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 153, 74

Conread position: 441-651
Cow position: chr5:12873432-12873635 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr5:26096981-26097193 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 64

Conread position: 441-651
Cow position: chr5:26561828-26562055 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 441-651
Cow position: chr5:28330645-28330438 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 71

Conread position: 441-651
Cow position: chr5:29827737-29827947 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 58

Conread position: 441-651
Cow position: chr5:30302582-30302791 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 61

Conread position: 441-651
Cow position: chr5:32141013-32140810 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 57

Conread position: 441-651
Cow position: chr5:32153632-32153417 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 153, 74

Conread position: 441-651
Cow position: chr5:33414721-33414514 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 76, 58

Conread position: 441-651
Cow position: chr5:34506242-34506028 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:34915825-34916037 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 75

Conread position: 441-651
Cow position: chr5:39094237-39094450 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:41523106-41522898 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr5:41951397-41951187 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 70

Conread position: 441-651
Cow position: chr5:42667708-42667494 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 74

Conread position: 441-651
Cow position: chr5:43923465-43923250 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 153, 64

Conread position: 441-651
Cow position: chr5:44994361-44994140 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 70, 115

Conread position: 441-651
Cow position: chr5:45226145-45225927 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 82

Conread position: 441-651
Cow position: chr5:45940929-45940714 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 154

Conread position: 441-651
Cow position: chr5:46023494-46023281 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:46080572-46080359 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:47317284-47317073 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 64

Conread position: 441-651
Cow position: chr5:52165495-52165281 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 156, 64

Conread position: 441-651
Cow position: chr5:54714058-54713841 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 74

Conread position: 441-651
Cow position: chr5:55176576-55176788 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 64

Conread position: 441-651
Cow position: chr5:56523858-56524073 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 75, 64

Conread position: 441-651
Cow position: chr5:58855786-58856001 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 109

Conread position: 441-651
Cow position: chr5:59303584-59303374 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 64

Conread position: 441-651
Cow position: chr5:61839872-61840084 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 74

Conread position: 441-651
Cow position: chr5:62827071-62826856 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 58, 73

Conread position: 441-651
Cow position: chr5:64844433-64844224 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 64

Conread position: 441-651
Cow position: chr5:65593561-65593775 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 71

Conread position: 441-651
Cow position: chr5:66338770-66338977 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 65

Conread position: 441-651
Cow position: chr5:66815897-66815677 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 68

Conread position: 441-651
Cow position: chr5:72564443-72564658 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 43

Conread position: 442-627
Cow position: chr5:60210454-60210269 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 63

Conread position: 442-632
Cow position: chr5:31103986-31104176 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 74

Conread position: 442-651
Cow position: chr5:48574089-48573866 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 186

Conread position: 442-651
Cow position: chr5:61030544-61030327 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 63

Conread position: 443-651
Cow position: chr5:3491895-3492091 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 151, 49

Conread position: 443-651
Cow position: chr5:28224141-28224350 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 86, 62

Conread position: 443-651
Cow position: chr5:28927911-28927691 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 71

Conread position: 443-651
Cow position: chr5:53055867-53055662 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 151, 72

Conread position: 444-582
Cow position: chr5:17645205-17645069 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 71

Conread position: 444-593
Cow position: chr5:23912576-23912724 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 444-612
Cow position: chr5:35207948-35208117 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 58

Conread position: 444-622
Cow position: chr5:31097118-31096938 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 61

Conread position: 444-633
Cow position: chr5:41936109-41935920 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 150, 61

Conread position: 444-649
Cow position: chr5:29903835-29903626 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 150, 61

Conread position: 444-649
Cow position: chr5:54405207-54404997 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 150, 71

Conread position: 444-650
Cow position: chr5:43858741-43858535 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 73, 65

Conread position: 444-651
Cow position: chr5:23856476-23856268 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 71

Conread position: 444-651
Cow position: chr5:47889028-47888813 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 64

Conread position: 446-592
Cow position: chr5:16206453-16206310 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 59

Conread position: 446-622
Cow position: chr5:30816404-30816581 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 59

Conread position: 446-633
Cow position: chr5:34463900-34463708 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 106

Conread position: 446-646
Cow position: chr5:49558851-49559060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 56

Conread position: 446-647
Cow position: chr5:765411-765611 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 53, 64

Conread position: 446-649
Cow position: chr5:64524190-64523984 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 148, 59

Conread position: 446-651
Cow position: chr5:12672333-12672132 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 148, 59

Conread position: 446-651
Cow position: chr5:15478797-15479011 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 81

Conread position: 446-651
Cow position: chr5:16184781-16184985 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 148, 59

Conread position: 446-651
Cow position: chr5:17087341-17087136 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 69

Conread position: 446-651
Cow position: chr5:18573859-18574068 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 69

Conread position: 446-651
Cow position: chr5:30276384-30276595 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 59

Conread position: 446-651
Cow position: chr5:34528253-34528460 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 150, 59

Conread position: 446-651
Cow position: chr5:34638582-34638782 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 148, 37

Conread position: 446-651
Cow position: chr5:42845911-42845708 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 59

Conread position: 446-651
Cow position: chr5:49820831-49821042 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 69

Conread position: 447-609
Cow position: chr5:40058267-40058427 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 58

Conread position: 447-622
Cow position: chr5:46708870-46709046 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 52

Conread position: 447-648
Cow position: chr5:50637522-50637721 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 46

Conread position: 447-648
Cow position: chr5:54311013-54311227 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 42, 141

Conread position: 447-649
Cow position: chr5:44752622-44752415 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 67

Conread position: 447-651
Cow position: chr5:27010984-27011195 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 58

Conread position: 447-651
Cow position: chr5:58519709-58519507 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 188, 68

Conread position: 448-620
Cow position: chr5:3281522-3281695 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 57

Conread position: 448-651
Cow position: chr5:65752550-65752754 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 57

Conread position: 449-622
Cow position: chr5:45170053-45170228 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 56

Conread position: 449-622
Cow position: chr5:55756749-55756573 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 58

Conread position: 449-645
Cow position: chr5:48828839-48829045 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 56

Conread position: 449-651
Cow position: chr5:51357810-51357602 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 145, 57

Conread position: 450-651
Cow position: chr5:63967948-63967749 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 29

Conread position: 453-622
Cow position: chr5:26467318-26467485 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 52

Conread position: 453-622
Cow position: chr5:64392850-64393020 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 52

Conread position: 458-633
Cow position: chr5:19751559-19751729 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 48

Conread position: 462-622
Cow position: chr5:63964476-63964307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 462-642
Cow position: chr5:34584977-34585158 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 40

Conread position: 464-621
Cow position: chr5:59443544-59443387 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 51

Conread position: 468-651
Cow position: chr5:43474565-43474745 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 27

Conread position: 505-642
Cow position: chr5:32087976-32087833 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 505-650
Cow position: chr5:72310460-72310605 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 133

Conread position: 505-651
Cow position: chr5:1247022-1247174 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 522-650
Cow position: chr5:56135205-56135072 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 532-651
Cow position: chr5:3771620-3771739 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 105

Conread position: 532-651
Cow position: chr5:36868519-36868637 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 105

Conread position: 532-651
Cow position: chr5:56820486-56820364 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 54

Conread position: 534-651
Cow position: chr5:12709662-12709783 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 20

Conread position: 540-651
Cow position: chr5:62142452-62142568 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 545-651
Cow position: chr5:35969329-35969440 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 548-651
Cow position: chr5:43395348-43395244 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.