Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 1-651 |
| Cow position: | chr6:56842393-56843068 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 529 |
| Conread position: | 2-632 |
| Cow position: | chr6:32125317-32125957 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 7-411 |
| Cow position: | chr6:1077884-1077474 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 77, 250 |
| Conread position: | 7-622 |
| Cow position: | chr6:37217016-37217648 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 351 |
| Conread position: | 32-651 |
| Cow position: | chr6:61632337-61631697 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 56-594 |
| Cow position: | chr6:27887356-27887907 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 161-582 |
| Cow position: | chr6:21590116-21590555 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 189 |
| Conread position: | 175-647 |
| Cow position: | chr6:43346036-43345559 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 386-650 |
| Cow position: | chr6:31525696-31525963 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 208, 56 |
| Conread position: | 431-622 |
| Cow position: | chr6:15242527-15242712 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 432-622 |
| Cow position: | chr6:55842470-55842282 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 168, 5 |
| Conread position: | 438-612 |
| Cow position: | chr6:32287315-32287486 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 67 |
| Conread position: | 438-647 |
| Cow position: | chr6:50446064-50445855 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 156, 77 |
| Conread position: | 438-651 |
| Cow position: | chr6:16410891-16411102 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 440-651 |
| Cow position: | chr6:8636972-8637187 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 441-581 |
| Cow position: | chr6:35103626-35103491 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 441-585 |
| Cow position: | chr6:18904873-18904732 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 441-590 |
| Cow position: | chr6:7010411-7010264 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 441-592 |
| Cow position: | chr6:55763088-55763235 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 441-601 |
| Cow position: | chr6:20245782-20245943 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-609 |
| Cow position: | chr6:12845008-12845182 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 441-618 |
| Cow position: | chr6:48169643-48169820 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-620 |
| Cow position: | chr6:12927821-12927998 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 441-620 |
| Cow position: | chr6:21004354-21004534 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-620 |
| Cow position: | chr6:47339658-47339470 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-620 |
| Cow position: | chr6:47773517-47773334 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 441-620 |
| Cow position: | chr6:65862384-65862564 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 441-621 |
| Cow position: | chr6:6067990-6067798 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 441-622 |
| Cow position: | chr6:6614133-6614314 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 441-622 |
| Cow position: | chr6:10332408-10332216 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-622 |
| Cow position: | chr6:24031073-24031255 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 67 |
| Conread position: | 441-622 |
| Cow position: | chr6:28811297-28811116 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 82 |
| Conread position: | 441-622 |
| Cow position: | chr6:52216057-52215875 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 441-622 |
| Cow position: | chr6:52235548-52235366 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 441-622 |
| Cow position: | chr6:52431335-52431152 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 441-622 |
| Cow position: | chr6:57309069-57309251 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-622 |
| Cow position: | chr6:60859605-60859426 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 153, 62 |
| Conread position: | 441-622 |
| Cow position: | chr6:65016192-65016010 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 441-623 |
| Cow position: | chr6:53178337-53178518 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 441-624 |
| Cow position: | chr6:50527357-50527537 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-624 |
| Cow position: | chr6:55205739-55205556 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 441-627 |
| Cow position: | chr6:1770497-1770314 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 441-627 |
| Cow position: | chr6:10605382-10605570 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 441-633 |
| Cow position: | chr6:6117858-6117658 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 441-633 |
| Cow position: | chr6:12629712-12629915 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 441-633 |
| Cow position: | chr6:35990530-35990332 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 441-633 |
| Cow position: | chr6:63047275-63047468 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 153, 26 |
| Conread position: | 441-633 |
| Cow position: | chr6:66304142-66303956 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 441-633 |
| Cow position: | chr6:67544594-67544401 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-637 |
| Cow position: | chr6:17414755-17414557 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 74 |
| Conread position: | 441-637 |
| Cow position: | chr6:24902439-24902248 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-641 |
| Cow position: | chr6:49794806-49795004 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-644 |
| Cow position: | chr6:42565384-42565584 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-645 |
| Cow position: | chr6:32867508-32867300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-648 |
| Cow position: | chr6:10176600-10176392 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 441-649 |
| Cow position: | chr6:53448746-53448952 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-650 |
| Cow position: | chr6:18447811-18447597 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 441-650 |
| Cow position: | chr6:22877456-22877250 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 441-650 |
| Cow position: | chr6:58073741-58073959 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 441-651 |
| Cow position: | chr6:606960-607178 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 441-651 |
| Cow position: | chr6:1784067-1783866 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 51 |
| Conread position: | 441-651 |
| Cow position: | chr6:1944428-1944636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 441-651 |
| Cow position: | chr6:2012717-2012931 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:2607312-2607528 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 67 |
| Conread position: | 441-651 |
| Cow position: | chr6:3978963-3978753 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 153, 68 |
| Conread position: | 441-651 |
| Cow position: | chr6:5958317-5958107 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 441-651 |
| Cow position: | chr6:6343126-6343338 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 441-651 |
| Cow position: | chr6:7801667-7801453 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:8318467-8318252 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 66 |
| Conread position: | 441-651 |
| Cow position: | chr6:9751347-9751133 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 200 |
| Conread position: | 441-651 |
| Cow position: | chr6:11169406-11169617 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:12337683-12337896 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:12387622-12387412 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 157, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:12623169-12623384 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:13741396-13741607 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 441-651 |
| Cow position: | chr6:14063960-14063749 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:15305287-15305493 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:16699960-16700171 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 441-651 |
| Cow position: | chr6:16706708-16706914 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:19681818-19681611 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 176, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:21312057-21311842 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 152, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:23695696-23695906 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:24327437-24327227 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:24652482-24652276 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:25407708-25407480 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-651 |
| Cow position: | chr6:25784011-25784224 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:29077427-29077641 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 441-651 |
| Cow position: | chr6:32916222-32916012 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:35181554-35181346 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 441-651 |
| Cow position: | chr6:36195912-36196126 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:37634488-37634696 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:40031892-40032105 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 63, 67 |
| Conread position: | 441-651 |
| Cow position: | chr6:44078214-44078430 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 441-651 |
| Cow position: | chr6:52002068-52002280 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:52556773-52556562 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 148, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:53345494-53345708 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 154, 74 |
| Conread position: | 441-651 |
| Cow position: | chr6:54140516-54140720 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:54806921-54807139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:57685857-57686070 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:58075926-58076136 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:59597355-59597574 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:60017768-60017978 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 150, 58 |
| Conread position: | 441-651 |
| Cow position: | chr6:60456529-60456743 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chr6:64431640-64431851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-651 |
| Cow position: | chr6:68252482-68252694 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 442-649 |
| Cow position: | chr6:4864839-4864638 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 442-651 |
| Cow position: | chr6:44098787-44098996 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 443-622 |
| Cow position: | chr6:61443400-61443223 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 443-651 |
| Cow position: | chr6:55474950-55475158 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 444-641 |
| Cow position: | chr6:14839325-14839129 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 444-649 |
| Cow position: | chr6:8599490-8599699 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 67 |
| Conread position: | 444-651 |
| Cow position: | chr6:18987919-18988125 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 444-651 |
| Cow position: | chr6:35842362-35842562 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 191, 61 |
| Conread position: | 444-651 |
| Cow position: | chr6:46666807-46667018 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 179, 67 |
| Conread position: | 444-651 |
| Cow position: | chr6:50120084-50119878 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 446-622 |
| Cow position: | chr6:8753606-8753429 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 446-628 |
| Cow position: | chr6:60516431-60516616 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 446-633 |
| Cow position: | chr6:9008904-9008720 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 446-633 |
| Cow position: | chr6:19508728-19508540 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 446-644 |
| Cow position: | chr6:28482718-28482914 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 446-648 |
| Cow position: | chr6:16618871-16619065 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 446-649 |
| Cow position: | chr6:54980805-54981006 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 61 |
| Conread position: | 446-650 |
| Cow position: | chr6:52478739-52478511 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 446-651 |
| Cow position: | chr6:611270-611474 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 446-651 |
| Cow position: | chr6:25358780-25358987 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 169, 69 |
| Conread position: | 446-651 |
| Cow position: | chr6:27852001-27851796 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 150, 59 |
| Conread position: | 446-651 |
| Cow position: | chr6:36470862-36470656 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 446-651 |
| Cow position: | chr6:47540229-47540443 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 446-651 |
| Cow position: | chr6:53401074-53401276 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 447-622 |
| Cow position: | chr6:6060853-6060677 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 58 |
| Conread position: | 447-622 |
| Cow position: | chr6:14958639-14958469 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 48 |
| Conread position: | 447-651 |
| Cow position: | chr6:62925288-62925085 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 449-625 |
| Cow position: | chr6:48567636-48567459 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 449-649 |
| Cow position: | chr6:12500563-12500771 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 449-651 |
| Cow position: | chr6:8209879-8209679 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 450-651 |
| Cow position: | chr6:34235728-34235522 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 168 |
| Conread position: | 450-651 |
| Cow position: | chr6:38218372-38218584 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 462-633 |
| Cow position: | chr6:69500049-69500215 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 462-651 |
| Cow position: | chr6:642858-642661 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 462-651 |
| Cow position: | chr6:28147970-28148160 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 462-651 |
| Cow position: | chr6:54867231-54867425 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 43 |
| Conread position: | 470-650 |
| Cow position: | chr6:54365596-54365420 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 524-643 |
| Cow position: | chr6:7190339-7190220 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 113 |
| Conread position: | 524-651 |
| Cow position: | chr6:21110749-21110876 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 532-650 |
| Cow position: | chr6:66433736-66433854 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 532-651 |
| Cow position: | chr6:53651828-53651955 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 537-651 |
| Cow position: | chr6:6460335-6460455 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 538-651 |
| Cow position: | chr6:6098488-6098372 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 538-651 |
| Cow position: | chr6:38641292-38641406 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 88 |
Show alignments to all cow chromosomes.