Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 2-651 |
| Cow position: | chr9:3411594-3410926 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 148 |
| Conread position: | 8-650 |
| Cow position: | chr9:36844633-36843993 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 126 |
| Conread position: | 21-651 |
| Cow position: | chr9:21459329-21460001 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 342 |
| Conread position: | 32-622 |
| Cow position: | chr9:635477-634887 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 320 |
| Conread position: | 41-651 |
| Cow position: | chr9:52407959-52407326 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 137-651 |
| Cow position: | chr9:44914406-44914931 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 217 |
| Conread position: | 156-651 |
| Cow position: | chr9:32813017-32812501 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 204-620 |
| Cow position: | chr9:59386162-59386586 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 78 |
| Conread position: | 205-649 |
| Cow position: | chr9:3724431-3724902 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 208-613 |
| Cow position: | chr9:5069741-5069318 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 212-422 |
| Cow position: | chr9:46316162-46316367 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 217-651 |
| Cow position: | chr9:13994799-13994343 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 304 |
| Conread position: | 365-651 |
| Cow position: | chr9:19903509-19903222 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 401-620 |
| Cow position: | chr9:43814854-43814633 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 412-651 |
| Cow position: | chr9:5763233-5763477 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 413-651 |
| Cow position: | chr9:64092088-64091841 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 414-612 |
| Cow position: | chr9:59197593-59197791 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 414-622 |
| Cow position: | chr9:45484561-45484353 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 418-622 |
| Cow position: | chr9:22114247-22114444 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 423-651 |
| Cow position: | chr9:6952484-6952247 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 429-651 |
| Cow position: | chr9:36446005-36445780 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 431-642 |
| Cow position: | chr9:19743356-19743152 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 431-649 |
| Cow position: | chr9:22151708-22151926 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 432-622 |
| Cow position: | chr9:31078705-31078893 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 5 |
| Conread position: | 432-650 |
| Cow position: | chr9:9552464-9552245 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 155, 5 |
| Conread position: | 432-651 |
| Cow position: | chr9:50080667-50080889 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 435-651 |
| Cow position: | chr9:27345060-27345285 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 436-651 |
| Cow position: | chr9:3379487-3379276 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 201, 69 |
| Conread position: | 436-651 |
| Cow position: | chr9:26391140-26390925 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 157, 79 |
| Conread position: | 436-651 |
| Cow position: | chr9:53608018-53608238 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 441-573 |
| Cow position: | chr9:41728902-41728773 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 441-588 |
| Cow position: | chr9:9780171-9780025 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-606 |
| Cow position: | chr9:8525436-8525269 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 441-609 |
| Cow position: | chr9:16218275-16218441 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 441-609 |
| Cow position: | chr9:40216631-40216464 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-611 |
| Cow position: | chr9:648144-647976 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 441-611 |
| Cow position: | chr9:33388537-33388708 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-612 |
| Cow position: | chr9:8937519-8937347 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-615 |
| Cow position: | chr9:789154-788992 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 166, 64 |
| Conread position: | 441-618 |
| Cow position: | chr9:37943149-37942974 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 66 |
| Conread position: | 441-621 |
| Cow position: | chr9:41857899-41857718 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:3807369-3807548 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:5246216-5246038 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:5268927-5268745 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:5455664-5455483 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:17296325-17296143 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-622 |
| Cow position: | chr9:38184107-38184289 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:39681729-39681546 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chr9:47499827-47500014 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 441-622 |
| Cow position: | chr9:53631157-53631338 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-625 |
| Cow position: | chr9:28747154-28747336 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-627 |
| Cow position: | chr9:8418006-8418191 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 156, 50 |
| Conread position: | 441-627 |
| Cow position: | chr9:8997927-8997740 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-627 |
| Cow position: | chr9:34310405-34310218 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-631 |
| Cow position: | chr9:17568508-17568318 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 441-632 |
| Cow position: | chr9:22456436-22456244 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-632 |
| Cow position: | chr9:22616990-22616802 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-632 |
| Cow position: | chr9:26477922-26477739 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 441-633 |
| Cow position: | chr9:7410153-7409960 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-633 |
| Cow position: | chr9:37017255-37017062 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-635 |
| Cow position: | chr9:49292719-49292927 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 441-642 |
| Cow position: | chr9:4534612-4534811 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-644 |
| Cow position: | chr9:1520358-1520560 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 441-644 |
| Cow position: | chr9:12194449-12194248 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-644 |
| Cow position: | chr9:18252559-18252753 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-644 |
| Cow position: | chr9:20393757-20393956 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-645 |
| Cow position: | chr9:4645963-4646164 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 441-645 |
| Cow position: | chr9:48809886-48809688 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-647 |
| Cow position: | chr9:9516400-9516609 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 441-648 |
| Cow position: | chr9:18381231-18381019 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 441-648 |
| Cow position: | chr9:28948224-28948012 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 441-649 |
| Cow position: | chr9:1984135-1984361 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 441-649 |
| Cow position: | chr9:1997500-1997297 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 196, 58 |
| Conread position: | 441-649 |
| Cow position: | chr9:8154550-8154344 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-649 |
| Cow position: | chr9:10966312-10966108 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-649 |
| Cow position: | chr9:11097644-11097852 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-649 |
| Cow position: | chr9:18215542-18215750 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 441-649 |
| Cow position: | chr9:48564466-48564260 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-650 |
| Cow position: | chr9:5594871-5594658 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-650 |
| Cow position: | chr9:8737222-8737017 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 441-651 |
| Cow position: | chr9:3388062-3387848 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:3594158-3594373 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 441-651 |
| Cow position: | chr9:5161703-5161907 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-651 |
| Cow position: | chr9:8534315-8534528 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 441-651 |
| Cow position: | chr9:13205199-13205411 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:14796413-14796616 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 46 |
| Conread position: | 441-651 |
| Cow position: | chr9:16300197-16300409 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 441-651 |
| Cow position: | chr9:17410818-17411023 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:18162781-18162999 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 441-651 |
| Cow position: | chr9:19382695-19382481 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 441-651 |
| Cow position: | chr9:20038790-20038988 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-651 |
| Cow position: | chr9:24997133-24997353 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 57, 212 |
| Conread position: | 441-651 |
| Cow position: | chr9:25969717-25969502 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:28773488-28773278 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 441-651 |
| Cow position: | chr9:33823462-33823255 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-651 |
| Cow position: | chr9:34696925-34697140 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:35592354-35592148 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 441-651 |
| Cow position: | chr9:37069180-37069412 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 441-651 |
| Cow position: | chr9:42445602-42445822 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 441-651 |
| Cow position: | chr9:42498199-42497986 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 156, 38 |
| Conread position: | 441-651 |
| Cow position: | chr9:42585255-42585467 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:42998091-42998310 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 51, 161 |
| Conread position: | 441-651 |
| Cow position: | chr9:46316417-46316629 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chr9:54666275-54666060 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 441-651 |
| Cow position: | chr9:64050189-64050399 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 442-622 |
| Cow position: | chr9:2398262-2398443 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 442-622 |
| Cow position: | chr9:27085833-27085646 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 443-625 |
| Cow position: | chr9:62657161-62656979 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 153, 62 |
| Conread position: | 443-651 |
| Cow position: | chr9:38032768-38032988 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 205 |
| Conread position: | 444-649 |
| Cow position: | chr9:35904383-35904587 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 444-651 |
| Cow position: | chr9:5071246-5071448 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 150, 50 |
| Conread position: | 444-651 |
| Cow position: | chr9:5621663-5621877 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 444-651 |
| Cow position: | chr9:8998723-8998513 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 444-651 |
| Cow position: | chr9:9200353-9200568 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 444-651 |
| Cow position: | chr9:21888537-21888326 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 444-651 |
| Cow position: | chr9:30664414-30664625 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 444-651 |
| Cow position: | chr9:31077310-31077521 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 148, 71 |
| Conread position: | 445-651 |
| Cow position: | chr9:1951903-1952112 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 152, 70 |
| Conread position: | 445-651 |
| Cow position: | chr9:5433998-5433795 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 445-651 |
| Cow position: | chr9:52504937-52505150 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 446-595 |
| Cow position: | chr9:52739534-52739681 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 446-613 |
| Cow position: | chr9:22318704-22318536 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 446-622 |
| Cow position: | chr9:9723517-9723691 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 446-622 |
| Cow position: | chr9:15982716-15982889 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 446-623 |
| Cow position: | chr9:22433577-22433754 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 446-633 |
| Cow position: | chr9:6366171-6366359 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 446-651 |
| Cow position: | chr9:9443226-9443440 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 87 |
| Conread position: | 446-651 |
| Cow position: | chr9:12428141-12428353 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 65 |
| Conread position: | 446-651 |
| Cow position: | chr9:31347319-31347111 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 148, 70 |
| Conread position: | 446-651 |
| Cow position: | chr9:31662832-31662623 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 150, 59 |
| Conread position: | 446-651 |
| Cow position: | chr9:39971399-39971200 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 447-609 |
| Cow position: | chr9:47905915-47906087 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 447-647 |
| Cow position: | chr9:30402052-30402252 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 448-651 |
| Cow position: | chr9:38961073-38961277 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 449-622 |
| Cow position: | chr9:34355570-34355736 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 57 |
| Conread position: | 449-622 |
| Cow position: | chr9:37510380-37510210 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 449-627 |
| Cow position: | chr9:20416148-20416325 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 449-648 |
| Cow position: | chr9:49544700-49544899 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 449-651 |
| Cow position: | chr9:5510087-5509878 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 451-651 |
| Cow position: | chr9:20989095-20989297 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 453-609 |
| Cow position: | chr9:41680092-41679938 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 454-622 |
| Cow position: | chr9:38793377-38793206 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 454-651 |
| Cow position: | chr9:23388321-23388521 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 462-622 |
| Cow position: | chr9:16086608-16086448 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 462-622 |
| Cow position: | chr9:19542258-19542098 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 462-622 |
| Cow position: | chr9:49982747-49982908 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 462-623 |
| Cow position: | chr9:21030667-21030504 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 462-627 |
| Cow position: | chr9:5218830-5218995 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 463-633 |
| Cow position: | chr9:38344244-38344072 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 470-651 |
| Cow position: | chr9:6933730-6933917 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 483-651 |
| Cow position: | chr9:22227756-22227926 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 492-649 |
| Cow position: | chr9:54681817-54681662 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 532-650 |
| Cow position: | chr9:32371479-32371603 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 532-651 |
| Cow position: | chr9:3070142-3070261 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 532-651 |
| Cow position: | chr9:5532233-5532106 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 533-651 |
| Cow position: | chr9:55084017-55084140 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 534-651 |
| Cow position: | chr9:30749306-30749428 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 536-651 |
| Cow position: | chr9:54677499-54677388 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.