Cow genome map
| Conread name: | Emb1-C0005211_E05 |
| Conread position: | 1-346 |
| Cow position: | chrX:1729650-1729299 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 186 |
| Conread position: | 2-642 |
| Cow position: | chrX:39556586-39555931 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 186 |
| Conread position: | 4-648 |
| Cow position: | chrX:34990274-34990931 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 295 |
| Conread position: | 11-609 |
| Cow position: | chrX:7695002-7695613 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 76-651 |
| Cow position: | chrX:20888318-20887747 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 99-651 |
| Cow position: | chrX:14924360-14924898 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 145 |
| Conread position: | 192-622 |
| Cow position: | chrX:34502361-34502785 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 218-509 |
| Cow position: | chrX:16000043-15999745 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 64 |
| Conread position: | 242-651 |
| Cow position: | chrX:31373058-31373464 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 123 |
| Conread position: | 243-632 |
| Cow position: | chrX:39698787-39699204 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 298 |
| Conread position: | 274-651 |
| Cow position: | chrX:41238827-41238468 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 145, 57 |
| Conread position: | 288-596 |
| Cow position: | chrX:21862165-21861834 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 248 |
| Conread position: | 366-620 |
| Cow position: | chrX:616785-616541 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 228, 62 |
| Conread position: | 403-651 |
| Cow position: | chrX:28111141-28111405 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 412-649 |
| Cow position: | chrX:17794637-17794882 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 431-622 |
| Cow position: | chrX:46606838-46606646 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 432-644 |
| Cow position: | chrX:38094848-38094641 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 5 |
| Conread position: | 436-651 |
| Cow position: | chrX:28866309-28866100 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 440-649 |
| Cow position: | chrX:6655583-6655376 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 440-649 |
| Cow position: | chrX:13648100-13647888 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 440-650 |
| Cow position: | chrX:24105310-24105524 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 156, 75 |
| Conread position: | 440-651 |
| Cow position: | chrX:36778089-36778310 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 71 |
| Conread position: | 441-582 |
| Cow position: | chrX:11614406-11614546 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-613 |
| Cow position: | chrX:38577218-38577390 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-620 |
| Cow position: | chrX:7718541-7718719 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 441-620 |
| Cow position: | chrX:21592971-21593148 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-621 |
| Cow position: | chrX:32978572-32978391 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:2417799-2417617 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:4905304-4905122 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:5017721-5017541 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:9651360-9651179 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:20878078-20877896 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:22493692-22493874 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:22811571-22811752 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:22812747-22812927 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:23583243-23583425 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:24102664-24102846 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:25035701-25035521 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 441-622 |
| Cow position: | chrX:27442867-27442689 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:29723136-29723315 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-622 |
| Cow position: | chrX:30543597-30543424 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:31949245-31949064 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 441-622 |
| Cow position: | chrX:32747343-32747527 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-622 |
| Cow position: | chrX:38072082-38071904 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 164, 70 |
| Conread position: | 441-622 |
| Cow position: | chrX:40452528-40452346 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:45903863-45904045 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-622 |
| Cow position: | chrX:48287755-48287586 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 441-623 |
| Cow position: | chrX:2499655-2499472 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-623 |
| Cow position: | chrX:47379782-47379600 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 441-632 |
| Cow position: | chrX:12115726-12115916 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 106, 64 |
| Conread position: | 441-633 |
| Cow position: | chrX:20582715-20582906 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-642 |
| Cow position: | chrX:23280691-23280892 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-642 |
| Cow position: | chrX:42507959-42507761 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-643 |
| Cow position: | chrX:28646300-28646103 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 441-643 |
| Cow position: | chrX:38439159-38439359 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 441-644 |
| Cow position: | chrX:2524045-2523844 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-644 |
| Cow position: | chrX:3654293-3654490 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 155, 51 |
| Conread position: | 441-645 |
| Cow position: | chrX:13868382-13868581 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 441-645 |
| Cow position: | chrX:15485940-15485739 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 441-645 |
| Cow position: | chrX:37072091-37072291 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-647 |
| Cow position: | chrX:31436165-31436373 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 441-648 |
| Cow position: | chrX:3207877-3207667 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-649 |
| Cow position: | chrX:7178597-7178800 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 441-650 |
| Cow position: | chrX:4123520-4123729 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-650 |
| Cow position: | chrX:33205307-33205097 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 441-650 |
| Cow position: | chrX:40269161-40269386 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:917685-917474 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:1616366-1616145 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 441-651 |
| Cow position: | chrX:2786861-2786653 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:3161331-3161115 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 55 |
| Conread position: | 441-651 |
| Cow position: | chrX:6413731-6413943 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:6543941-6544155 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:7571591-7571803 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 441-651 |
| Cow position: | chrX:7645943-7646155 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 114, 75 |
| Conread position: | 441-651 |
| Cow position: | chrX:9161273-9161484 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 441-651 |
| Cow position: | chrX:10412301-10412095 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:10866182-10865969 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:10916439-10916648 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 153, 73 |
| Conread position: | 441-651 |
| Cow position: | chrX:11581620-11581840 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 441-651 |
| Cow position: | chrX:11674743-11674964 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 441-651 |
| Cow position: | chrX:11718095-11717885 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:13177772-13177566 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 441-651 |
| Cow position: | chrX:15545582-15545792 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 441-651 |
| Cow position: | chrX:18695236-18695024 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:20340206-20339998 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:21063971-21064182 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:21665906-21665695 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 441-651 |
| Cow position: | chrX:25232271-25232489 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 441-651 |
| Cow position: | chrX:27446376-27446589 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:27705278-27705480 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:28632793-28632586 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:29049660-29049863 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 441-651 |
| Cow position: | chrX:31250077-31250291 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 441-651 |
| Cow position: | chrX:31443135-31442923 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 38 |
| Conread position: | 441-651 |
| Cow position: | chrX:32309786-32310008 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 441-651 |
| Cow position: | chrX:35268575-35268781 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 441-651 |
| Cow position: | chrX:35388222-35388003 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:35409353-35409558 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:35609671-35609887 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:36840552-36840775 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 441-651 |
| Cow position: | chrX:37843405-37843619 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:38218403-38218610 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:41122757-41122966 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:41192375-41192585 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:42247491-42247286 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 441-651 |
| Cow position: | chrX:42462063-42461845 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 441-651 |
| Cow position: | chrX:42470252-42470042 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 441-651 |
| Cow position: | chrX:42994299-42994515 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:43527188-43527402 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 441-651 |
| Cow position: | chrX:43648059-43647844 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 75 |
| Conread position: | 441-651 |
| Cow position: | chrX:47967285-47967497 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 442-649 |
| Cow position: | chrX:2300617-2300824 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 175 |
| Conread position: | 442-650 |
| Cow position: | chrX:45420989-45420771 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 442-651 |
| Cow position: | chrX:7350988-7351198 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 442-651 |
| Cow position: | chrX:20376656-20376864 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 442-651 |
| Cow position: | chrX:34009436-34009649 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 443-647 |
| Cow position: | chrX:21795183-21795385 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 444-622 |
| Cow position: | chrX:7806066-7806245 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 444-633 |
| Cow position: | chrX:20697915-20697729 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 150, 55 |
| Conread position: | 444-642 |
| Cow position: | chrX:46771284-46771083 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 444-651 |
| Cow position: | chrX:19188624-19188836 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 444-651 |
| Cow position: | chrX:23564109-23563894 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 445-620 |
| Cow position: | chrX:47873652-47873477 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 445-651 |
| Cow position: | chrX:11844549-11844348 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 185, 60 |
| Conread position: | 446-608 |
| Cow position: | chrX:31729148-31729309 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 446-623 |
| Cow position: | chrX:34564990-34565161 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 446-631 |
| Cow position: | chrX:41846844-41846657 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 446-648 |
| Cow position: | chrX:14884274-14884062 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 446-651 |
| Cow position: | chrX:1810471-1810265 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 145, 69 |
| Conread position: | 446-651 |
| Cow position: | chrX:7508816-7509041 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 446-651 |
| Cow position: | chrX:11981811-11982033 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 446-651 |
| Cow position: | chrX:17497786-17497984 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 446-651 |
| Cow position: | chrX:28847186-28846983 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 446-651 |
| Cow position: | chrX:34441757-34441553 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 446-651 |
| Cow position: | chrX:38936389-38936599 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 446-651 |
| Cow position: | chrX:41743603-41743810 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 446-651 |
| Cow position: | chrX:42855101-42855311 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 447-651 |
| Cow position: | chrX:10415835-10415628 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 448-651 |
| Cow position: | chrX:34663167-34662951 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 449-644 |
| Cow position: | chrX:38007075-38006882 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 449-649 |
| Cow position: | chrX:26441087-26440882 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 449-651 |
| Cow position: | chrX:25419467-25419259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 450-651 |
| Cow position: | chrX:33466311-33466510 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 454-622 |
| Cow position: | chrX:5919168-5919338 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 462-651 |
| Cow position: | chrX:19015148-19015337 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 462-651 |
| Cow position: | chrX:33020192-33020382 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 463-647 |
| Cow position: | chrX:42585361-42585181 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 463-651 |
| Cow position: | chrX:22482982-22482787 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 468-633 |
| Cow position: | chrX:40647691-40647855 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 476-651 |
| Cow position: | chrX:42874698-42874871 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 489-651 |
| Cow position: | chrX:17725711-17725873 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 491-651 |
| Cow position: | chrX:23497929-23497769 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 508-651 |
| Cow position: | chrX:41167214-41167066 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 522-635 |
| Cow position: | chrX:27176555-27176440 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 524-651 |
| Cow position: | chrX:11856196-11856327 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 527-631 |
| Cow position: | chrX:7721753-7721860 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 532-622 |
| Cow position: | chrX:38549223-38549315 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 532-650 |
| Cow position: | chrX:47247134-47247014 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 532-651 |
| Cow position: | chrX:13265845-13265724 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 532-651 |
| Cow position: | chrX:22074575-22074699 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 532-651 |
| Cow position: | chrX:39558573-39558451 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 532-651 |
| Cow position: | chrX:45787429-45787550 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 536-651 |
| Cow position: | chrX:23091660-23091780 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.