Cow genome map

Conread name: Emb1-C0005212_D01

Conread position: 43-258
Cow position: chr27:6541345-6541559 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 10

Conread position: 58-233
Cow position: chr27:19991878-19992051 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 29

Conread position: 62-267
Cow position: chr27:31153825-31153621 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 13

Conread position: 65-254
Cow position: chr27:19387754-19387942 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 57

Conread position: 65-258
Cow position: chr27:16965308-16965506 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 61

Conread position: 66-259
Cow position: chr27:11982912-11982718 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 13

Conread position: 68-225
Cow position: chr27:24952216-24952060 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 58

Conread position: 69-254
Cow position: chr27:14343700-14343525 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 59

Conread position: 69-258
Cow position: chr27:19932802-19932996 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 54

Conread position: 69-259
Cow position: chr27:15003243-15003050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 58

Conread position: 71-250
Cow position: chr27:4414074-4413900 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 71-258
Cow position: chr27:6162664-6162483 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 73-255
Cow position: chr27:20048376-20048558 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 55

Conread position: 74-257
Cow position: chr27:8791003-8790817 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 55

Conread position: 77-259
Cow position: chr27:20828960-20828782 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 44

Conread position: 77-267
Cow position: chr27:18435388-18435197 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 52

Conread position: 78-196
Cow position: chr27:30884985-30885103 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 15

Conread position: 79-258
Cow position: chr27:18491316-18491483 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 10

Conread position: 80-226
Cow position: chr27:23527751-23527606 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 46

Conread position: 80-228
Cow position: chr27:28192864-28192718 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 80-253
Cow position: chr27:30890049-30890213 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 80-254
Cow position: chr27:19452747-19452925 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 46

Conread position: 80-255
Cow position: chr27:16047739-16047574 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 42

Conread position: 80-255
Cow position: chr27:29614790-29614966 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 85, 46

Conread position: 80-256
Cow position: chr27:2592284-2592467 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 43

Conread position: 80-257
Cow position: chr27:20081383-20081202 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 48

Conread position: 80-258
Cow position: chr27:7935407-7935229 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 26

Conread position: 80-258
Cow position: chr27:15315271-15315446 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 80-258
Cow position: chr27:18791766-18791582 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 42

Conread position: 80-258
Cow position: chr27:20484481-20484657 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 80-258
Cow position: chr27:29431223-29431396 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 47

Conread position: 80-259
Cow position: chr27:14670632-14670454 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 48

Conread position: 80-259
Cow position: chr27:23560281-23560103 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 46

Conread position: 80-259
Cow position: chr27:29183480-29183288 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 48

Conread position: 80-266
Cow position: chr27:27450135-27449948 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 180, 46

Conread position: 80-270
Cow position: chr27:23594067-23594260 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 46

Conread position: 81-233
Cow position: chr27:22102892-22102741 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 45

Conread position: 81-240
Cow position: chr27:21448073-21447920 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 81-241
Cow position: chr27:18558107-18558271 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 45

Conread position: 81-242
Cow position: chr27:18688662-18688498 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 19

Conread position: 81-251
Cow position: chr27:12459037-12459209 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 45

Conread position: 81-251
Cow position: chr27:30914756-30914930 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 45

Conread position: 81-255
Cow position: chr27:8062603-8062426 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 46

Conread position: 81-255
Cow position: chr27:20514573-20514747 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 41

Conread position: 81-256
Cow position: chr27:12284744-12284920 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 8

Conread position: 81-257
Cow position: chr27:591018-590836 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 8

Conread position: 81-258
Cow position: chr27:19557143-19557316 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 19

Conread position: 81-259
Cow position: chr27:10979609-10979791 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 45

Conread position: 82-197
Cow position: chr27:26315390-26315275 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 82, 44

Conread position: 82-257
Cow position: chr27:26317817-26317991 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 15

Conread position: 82-258
Cow position: chr27:24303692-24303874 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 39

Conread position: 82-258
Cow position: chr27:31210300-31210475 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 44

Conread position: 83-252
Cow position: chr27:26400968-26400800 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 45

Conread position: 83-254
Cow position: chr27:426721-426893 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 82, 43

Conread position: 83-258
Cow position: chr27:13940800-13940630 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 47

Conread position: 83-258
Cow position: chr27:15867143-15867317 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 44

Conread position: 83-258
Cow position: chr27:20266475-20266298 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 39

Conread position: 83-258
Cow position: chr27:26481446-26481268 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 39

Conread position: 84-237
Cow position: chr27:4487028-4486871 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 40

Conread position: 84-242
Cow position: chr27:28922143-28921981 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 38

Conread position: 84-251
Cow position: chr27:26853598-26853437 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 5

Conread position: 84-255
Cow position: chr27:30868999-30868816 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 42

Conread position: 84-259
Cow position: chr27:7343675-7343500 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 5

Conread position: 85-264
Cow position: chr27:26999670-26999489 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 43

Conread position: 87-262
Cow position: chr27:23452218-23452393 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 39

Conread position: 88-233
Cow position: chr27:2934264-2934406 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 21

Conread position: 88-239
Cow position: chr27:3698917-3698764 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 46

Conread position: 88-259
Cow position: chr27:6319678-6319847 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 39

Conread position: 88-259
Cow position: chr27:13204221-13204387 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 88-267
Cow position: chr27:22035615-22035441 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 46

Conread position: 89-219
Cow position: chr27:21993942-21993815 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 89-241
Cow position: chr27:28062437-28062288 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 89-247
Cow position: chr27:22547631-22547480 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 89-248
Cow position: chr27:11208800-11208637 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 39

Conread position: 89-248
Cow position: chr27:15453970-15454128 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 33

Conread position: 89-248
Cow position: chr27:18507402-18507567 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 89-248
Cow position: chr27:21660893-21661053 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 37

Conread position: 89-251
Cow position: chr27:10581291-10581453 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 37

Conread position: 89-251
Cow position: chr27:16103568-16103730 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 39

Conread position: 89-251
Cow position: chr27:22171059-22171220 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 89-251
Cow position: chr27:23994658-23994492 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 37

Conread position: 89-251
Cow position: chr27:27055053-27055209 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 89-253
Cow position: chr27:8630117-8629949 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 38

Conread position: 89-255
Cow position: chr27:11528686-11528855 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 37

Conread position: 89-255
Cow position: chr27:16246565-16246726 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 89-255
Cow position: chr27:20749245-20749086 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 97, 37

Conread position: 89-255
Cow position: chr27:23929735-23929891 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 89-255
Cow position: chr27:26087077-26087240 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 31

Conread position: 89-255
Cow position: chr27:28476351-28476189 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 89-255
Cow position: chr27:29388429-29388596 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 34

Conread position: 89-255
Cow position: chr27:31004699-31004859 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 89-255
Cow position: chr27:31386873-31386707 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 37

Conread position: 89-256
Cow position: chr27:178620-178788 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 76, 37

Conread position: 89-258
Cow position: chr27:4944749-4944587 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 89-258
Cow position: chr27:9977443-9977610 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 33

Conread position: 89-258
Cow position: chr27:10404360-10404187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 89-258
Cow position: chr27:11480881-11480709 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 33

Conread position: 89-259
Cow position: chr27:3498313-3498479 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 89-259
Cow position: chr27:4398728-4398563 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 89-259
Cow position: chr27:7412150-7412321 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 38

Conread position: 89-259
Cow position: chr27:11133845-11134014 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 76, 37

Conread position: 89-259
Cow position: chr27:24693175-24693341 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 89-259
Cow position: chr27:26118254-26118428 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 37

Conread position: 89-259
Cow position: chr27:27529057-27528892 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 33

Conread position: 89-259
Cow position: chr27:28206561-28206730 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 37

Conread position: 89-259
Cow position: chr27:31231321-31231153 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 11

Conread position: 89-260
Cow position: chr27:17397694-17397525 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 89-264
Cow position: chr27:24358097-24358266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 89-264
Cow position: chr27:26939835-26940012 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 33

Conread position: 89-264
Cow position: chr27:27389270-27389090 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 37

Conread position: 89-265
Cow position: chr27:15669017-15668837 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 37

Conread position: 89-267
Cow position: chr27:2949559-2949391 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 31

Conread position: 89-267
Cow position: chr27:19508769-19508949 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 37

Conread position: 89-267
Cow position: chr27:23918277-23918104 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 37

Conread position: 89-267
Cow position: chr27:24223712-24223888 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 31

Conread position: 89-267
Cow position: chr27:29164532-29164706 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 33

Conread position: 89-269
Cow position: chr27:26617172-26617346 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 32

Conread position: 89-269
Cow position: chr27:27856096-27856271 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 89-271
Cow position: chr27:31183330-31183516 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 11

Conread position: 89-274
Cow position: chr27:29877719-29877528 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 37

Conread position: 90-247
Cow position: chr27:20897262-20897105 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 36

Conread position: 90-250
Cow position: chr27:31219031-31219184 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 31

Conread position: 90-251
Cow position: chr27:29597987-29597827 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 36

Conread position: 90-255
Cow position: chr27:9253354-9253189 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 36

Conread position: 90-258
Cow position: chr27:27606536-27606369 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 32

Conread position: 90-259
Cow position: chr27:20325115-20325279 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 90-259
Cow position: chr27:22386646-22386803 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 90-259
Cow position: chr27:26226530-26226362 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 36

Conread position: 90-264
Cow position: chr27:30884786-30884961 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 33

Conread position: 90-267
Cow position: chr27:19576565-19576387 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 37

Conread position: 90-267
Cow position: chr27:26112160-26111979 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 36

Conread position: 91-236
Cow position: chr27:22150934-22150789 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 35

Conread position: 91-252
Cow position: chr27:30444915-30444759 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 91-258
Cow position: chr27:20283403-20283563 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 91-267
Cow position: chr27:20517411-20517594 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 32

Conread position: 91-267
Cow position: chr27:23484975-23485149 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 31

Conread position: 91-270
Cow position: chr27:20324898-20325083 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 35

Conread position: 91-277
Cow position: chr27:24240111-24240305 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 29

Conread position: 92-255
Cow position: chr27:20490284-20490455 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 36

Conread position: 92-258
Cow position: chr27:27632833-27632674 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 92-259
Cow position: chr27:299614-299453 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 92-267
Cow position: chr27:1067336-1067504 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 93-246
Cow position: chr27:25790064-25790212 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 93-251
Cow position: chr27:2957178-2957332 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 93-251
Cow position: chr27:26643464-26643608 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 93-254
Cow position: chr27:25151850-25152012 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 28

Conread position: 93-258
Cow position: chr27:7425427-7425261 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 39

Conread position: 93-258
Cow position: chr27:12596543-12596704 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 93-258
Cow position: chr27:17102661-17102823 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 93-258
Cow position: chr27:21951219-21951051 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 33

Conread position: 93-259
Cow position: chr27:29494137-29493972 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 33

Conread position: 93-266
Cow position: chr27:22220311-22220489 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 33

Conread position: 94-259
Cow position: chr27:15865372-15865535 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 94-260
Cow position: chr27:6106469-6106633 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 26

Conread position: 95-262
Cow position: chr27:26323205-26323381 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 31

Conread position: 96-267
Cow position: chr27:26865344-26865182 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 30

Conread position: 99-255
Cow position: chr27:15409258-15409112 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 99-258
Cow position: chr27:1184406-1184250 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 23

Conread position: 99-258
Cow position: chr27:16705020-16705178 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 27

Conread position: 100-259
Cow position: chr27:23477716-23477874 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 26

Conread position: 101-251
Cow position: chr27:15859528-15859374 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 25

Conread position: 101-252
Cow position: chr27:26909819-26909670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 101-255
Cow position: chr27:232320-232478 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 25

Conread position: 101-258
Cow position: chr27:23177543-23177385 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 25

Conread position: 101-259
Cow position: chr27:31031236-31031383 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 102-258
Cow position: chr27:13318207-13318047 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 24

Conread position: 103-250
Cow position: chr27:26504075-26504224 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 20

Conread position: 103-255
Cow position: chr27:19685939-19685789 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 19

Conread position: 103-259
Cow position: chr27:21669341-21669189 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 23

Conread position: 103-267
Cow position: chr27:23108131-23107964 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 23

Conread position: 105-258
Cow position: chr27:23890706-23890865 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 21

Conread position: 106-259
Cow position: chr27:26238798-26238953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 20

Conread position: 107-255
Cow position: chr27:23060341-23060189 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 19

Conread position: 109-235
Cow position: chr27:624439-624314 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 19

Conread position: 111-259
Cow position: chr27:28478363-28478508 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 124-253
Cow position: chr27:1768831-1768701 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 134-251
Cow position: chr27:26506544-26506665 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 145-255
Cow position: chr27:26959802-26959690 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 164-267
Cow position: chr27:30489577-30489474 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.