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Cow genome map

           
Conread name:
           
Emb1-C0005212_G09
        

               
Conread position:
               
234-505
               

               
Cow position:
               
chr2:39228741-39229011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
239-525
               

               
Cow position:
               
chr2:42975755-42975477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
296-488
               

               
Cow position:
               
chr2:44986341-44986140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr2:55496307-55496084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
299-520
               

               
Cow position:
               
chr2:55004281-55004500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr2:28726459-28726669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
301-422
               

               
Cow position:
               
chr2:19502487-19502367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
301-431
               

               
Cow position:
               
chr2:28303309-28303446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-432
               

               
Cow position:
               
chr2:36017419-36017286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
301-435
               

               
Cow position:
               
chr2:53575384-53575527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
301-488
               

               
Cow position:
               
chr2:45367290-45367465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
301-488
               

               
Cow position:
               
chr2:63074862-63074678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
301-489
               

               
Cow position:
               
chr2:43835570-43835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr2:17492526-17492331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr2:28711009-28710822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr2:45619399-45619209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 148
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr2:46014756-46014957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr2:86541162-86540966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
301-491
               

               
Cow position:
               
chr2:35988629-35988429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
301-491
               

               
Cow position:
               
chr2:65931955-65932157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
301-497
               

               
Cow position:
               
chr2:46161947-46162147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
301-497
               

               
Cow position:
               
chr2:69250675-69250472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:13672514-13672711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:18589541-18589340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:24271218-24271410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:55632766-55632967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:73094797-73094609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:80177597-80177402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr2:84480511-84480304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr2:46202258-46202464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
301-501
               

               
Cow position:
               
chr2:43624544-43624341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:15250172-15250369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:21380408-21380201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:26500943-26500737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:45935970-45935766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:70908335-70908130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr2:76861466-76861249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 213
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr2:17967037-17966837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr2:35092703-35092502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr2:46130163-46129961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
301-508
               

               
Cow position:
               
chr2:16428406-16428194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr2:13856830-13856611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr2:27178643-27178853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr2:44197871-44198088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr2:46343154-46342941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr2:81480840-81481052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr2:8138911-8139128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr2:47047764-47047545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 204
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr2:52466458-52466245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 192
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr2:79837736-79837512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr2:40728340-40728572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:14826266-14826492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:16847174-16847395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:19212065-19211849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:39067494-39067707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:41007551-41007329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:41040716-41040493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:41157960-41158169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:51855744-51855525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:56003227-56003445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 154
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr2:60091443-60091221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr2:36963517-36963733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr2:54967998-54968221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr2:11656882-11657104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr2:17940296-17940076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr2:59397063-59396836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
301-519
               

               
Cow position:
               
chr2:46316862-46317088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 201
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr2:45478607-45478384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr2:6039003-6039234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr2:41915433-41915210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr2:69579689-69579457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
301-523
               

               
Cow position:
               
chr2:42183362-42183587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr2:38837527-38837293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr2:40597568-40597794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr2:41622474-41622706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr2:44051301-44051532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr2:44229700-44229485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:2827733-2827964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:13013080-13013302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:37155096-37155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:40411185-40410953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:43990762-43990990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:80275303-80275069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr2:80770108-80770326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
302-490
               

               
Cow position:
               
chr2:39409715-39409544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr2:992146-992355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
303-465
               

               
Cow position:
               
chr2:4016849-4016688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
303-465
               

               
Cow position:
               
chr2:66480194-66480028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr2:777689-777488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr2:1476402-1476604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr2:39663369-39663574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr2:50914020-50913806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-511
               

               
Cow position:
               
chr2:21382858-21382641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 207
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr2:38662700-38662485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
303-518
               

               
Cow position:
               
chr2:66149324-66149530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
303-523
               

               
Cow position:
               
chr2:21049335-21049114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
303-524
               

               
Cow position:
               
chr2:15219105-15219331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
303-525
               

               
Cow position:
               
chr2:54700448-54700680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
303-526
               

               
Cow position:
               
chr2:4096587-4096373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
304-493
               

               
Cow position:
               
chr2:47065102-47065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr2:46053463-46053681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
304-515
               

               
Cow position:
               
chr2:72315819-72315598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
304-517
               

               
Cow position:
               
chr2:46126142-46125925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
304-526
               

               
Cow position:
               
chr2:14847859-14848070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
305-432
               

               
Cow position:
               
chr2:14854304-14854432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
305-433
               

               
Cow position:
               
chr2:14626586-14626720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-435
               

               
Cow position:
               
chr2:44025374-44025508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
305-475
               

               
Cow position:
               
chr2:80235355-80235178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
305-490
               

               
Cow position:
               
chr2:1422345-1422539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 152
               

               
Conread position:
               
305-490
               

               
Cow position:
               
chr2:38795768-38795584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
305-490
               

               
Cow position:
               
chr2:70746758-70746936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr2:67745246-67745445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
305-506
               

               
Cow position:
               
chr2:20947366-20947572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr2:16890059-16889850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
305-517
               

               
Cow position:
               
chr2:9543308-9543524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
307-498
               

               
Cow position:
               
chr2:46119768-46119572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
307-519
               

               
Cow position:
               
chr2:27337779-27337561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
309-434
               

               
Cow position:
               
chr2:46909430-46909308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr2:15298544-15298730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr2:15400942-15400752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
310-467
               

               
Cow position:
               
chr2:39501045-39501201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
310-510
               

               
Cow position:
               
chr2:16109734-16109540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
310-515
               

               
Cow position:
               
chr2:39514042-39514251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
311-498
               

               
Cow position:
               
chr2:45138428-45138247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
311-512
               

               
Cow position:
               
chr2:69419578-69419380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
311-515
               

               
Cow position:
               
chr2:75462333-75462535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
311-521
               

               
Cow position:
               
chr2:2437601-2437391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
312-432
               

               
Cow position:
               
chr2:36765302-36765183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
312-491
               

               
Cow position:
               
chr2:35043969-35044156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 144
               

               
Conread position:
               
312-498
               

               
Cow position:
               
chr2:42192445-42192620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
312-507
               

               
Cow position:
               
chr2:24530377-24530567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
312-507
               

               
Cow position:
               
chr2:50353952-50354137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr2:18243546-18243741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
312-514
               

               
Cow position:
               
chr2:41019201-41019006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
312-515
               

               
Cow position:
               
chr2:66562032-66561825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
312-525
               

               
Cow position:
               
chr2:24218209-24217992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
313-483
               

               
Cow position:
               
chr2:36575743-36575916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 135
               

               
Conread position:
               
313-488
               

               
Cow position:
               
chr2:46204526-46204705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 5
               

               
Conread position:
               
313-493
               

               
Cow position:
               
chr2:39815276-39815105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
6, 103
               

               
Conread position:
               
313-496
               

               
Cow position:
               
chr2:19164961-19164775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr2:15871944-15872125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr2:38953833-38954029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 5
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr2:40410155-40410342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr2:42476222-42476038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr2:67302026-67302214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr2:38162789-38162597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr2:45510551-45510347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
313-510
               

               
Cow position:
               
chr2:45565714-45565910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
313-513
               

               
Cow position:
               
chr2:30351698-30351493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr2:10628527-10628320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr2:12186639-12186842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
132, 173
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr2:38886632-38886431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr2:65554794-65554592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr2:68328844-68328641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
313-525
               

               
Cow position:
               
chr2:5300604-5300822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
313-525
               

               
Cow position:
               
chr2:72003935-72003725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
314-496
               

               
Cow position:
               
chr2:49862663-49862850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
314-515
               

               
Cow position:
               
chr2:3128067-3127862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
314-525
               

               
Cow position:
               
chr2:33560667-33560453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
315-423
               

               
Cow position:
               
chr2:68397594-68397486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-470
               

               
Cow position:
               
chr2:62200764-62200927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr2:22370937-22370746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr2:83273663-83273472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 134
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr2:19137882-19137679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr2:22371374-22371576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr2:29041903-29042109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 186
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr2:41422806-41423008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr2:16513866-16514076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr2:60182021-60181808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
315-525
               

               
Cow position:
               
chr2:34591341-34591137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
316-488
               

               
Cow position:
               
chr2:39334859-39334688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
316-515
               

               
Cow position:
               
chr2:38913497-38913697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
316-515
               

               
Cow position:
               
chr2:47194974-47195180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
317-498
               

               
Cow position:
               
chr2:45522022-45521836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 136
               

               
Conread position:
               
317-498
               

               
Cow position:
               
chr2:55872508-55872323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr2:29928072-29928269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 188
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr2:46942339-46942147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
159, 130
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr2:50106120-50106316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr2:66959688-66959886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
95, 133
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr2:15972834-15973036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 136
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr2:46242570-46242370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
317-524
               

               
Cow position:
               
chr2:37791107-37790894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 190
               

               
Conread position:
               
317-524
               

               
Cow position:
               
chr2:47403221-47403434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 133
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr2:36137025-36137231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
317-526
               

               
Cow position:
               
chr2:1923872-1923660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
120, 197
               

               
Conread position:
               
318-420
               

               
Cow position:
               
chr2:13271405-13271303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-428
               

               
Cow position:
               
chr2:39525476-39525586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-430
               

               
Cow position:
               
chr2:40058725-40058613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-430
               

               
Cow position:
               
chr2:46190244-46190356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-432
               

               
Cow position:
               
chr2:2689767-2689879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
318-435
               

               
Cow position:
               
chr2:45380188-45380071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-435
               

               
Cow position:
               
chr2:46300625-46300742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-480
               

               
Cow position:
               
chr2:50565948-50566115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr2:57565321-57565147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
318-490
               

               
Cow position:
               
chr2:78360423-78360598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chr2:45589642-45589464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
318-493
               

               
Cow position:
               
chr2:56102317-56102143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr2:37614955-37615139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 135
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr2:65059052-65059238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr2:76313854-76313671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr2:80848097-80848278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 89
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:9726084-9725904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:13369668-13369853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
104, 130
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:13468229-13468412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:32264378-32264198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 129
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:37347799-37347980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:41768641-41768466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:64323252-64323433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr2:64473335-64473160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr2:11435299-11435487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr2:61137566-61137741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
318-506
               

               
Cow position:
               
chr2:32840598-32840417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
318-507
               

               
Cow position:
               
chr2:14218665-14218859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 135
               

               
Conread position:
               
318-510
               

               
Cow position:
               
chr2:15348407-15348603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
318-510
               

               
Cow position:
               
chr2:32988579-32988777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
318-513
               

               
Cow position:
               
chr2:78379405-78379212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
318-514
               

               
Cow position:
               
chr2:28285352-28285143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 196
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:29394995-29394792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:35934894-35935102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:46614415-46614614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:48635031-48634841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:59785896-59786089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr2:82957692-82957891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
119, 186
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr2:9062691-9062894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr2:32048494-32048691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 133
               

               
Conread position:
               
318-520
               

               
Cow position:
               
chr2:57776359-57776567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
318-521
               

               
Cow position:
               
chr2:12682648-12682440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 132
               

               
Conread position:
               
318-521
               

               
Cow position:
               
chr2:22371938-22371739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
318-521
               

               
Cow position:
               
chr2:71486792-71486993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
318-522
               

               
Cow position:
               
chr2:49467643-49467850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
318-524
               

               
Cow position:
               
chr2:26361768-26361976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 192
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr2:42970128-42970327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr2:47978031-47977821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
110, 135
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr2:49428395-49428604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
318-526
               

               
Cow position:
               
chr2:81913012-81913223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
319-429
               

               
Cow position:
               
chr2:45624029-45624139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr2:5755282-5755106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr2:55387588-55387764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr2:69093134-69092952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
319-521
               

               
Cow position:
               
chr2:49248530-49248322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
319-523
               

               
Cow position:
               
chr2:24596472-24596676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
320-489
               

               
Cow position:
               
chr2:24469366-24469197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
320-498
               

               
Cow position:
               
chr2:42801054-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
320-505
               

               
Cow position:
               
chr2:15734430-15734623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-515
               

               
Cow position:
               
chr2:10574547-10574347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
321-435
               

               
Cow position:
               
chr2:44021757-44021870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
321-497
               

               
Cow position:
               
chr2:1410119-1409939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr2:4921916-4921726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr2:21171619-21171809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
321-511
               

               
Cow position:
               
chr2:26438709-26438520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
322-491
               

               
Cow position:
               
chr2:59819789-59819623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
322-496
               

               
Cow position:
               
chr2:49717070-49716892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
322-515
               

               
Cow position:
               
chr2:33497186-33496988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
322-522
               

               
Cow position:
               
chr2:63051160-63050955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
322-522
               

               
Cow position:
               
chr2:67046950-67047140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
323-434
               

               
Cow position:
               
chr2:27187547-27187658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
323-435
               

               
Cow position:
               
chr2:12958431-12958542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
323-466
               

               
Cow position:
               
chr2:53575969-53575822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
323-485
               

               
Cow position:
               
chr2:81233091-81232924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
323-488
               

               
Cow position:
               
chr2:76762235-76762406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr2:67386455-67386284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 91
               

               
Conread position:
               
323-490
               

               
Cow position:
               
chr2:38947199-38947043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
323-490
               

               
Cow position:
               
chr2:45542380-45542214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
323-492
               

               
Cow position:
               
chr2:38651533-38651696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:6160324-6160159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:6884478-6884642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:10319934-10319760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:33988298-33988116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:70847243-70847072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr2:72527979-72528153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
323-496
               

               
Cow position:
               
chr2:54790300-54790476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr2:68064585-68064764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr2:82374459-82374630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr2:4644289-4644465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
114, 125
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr2:15059043-15058866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr2:16071383-16071207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 126
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr2:32660196-32660377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 127
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr2:6304271-6304087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr2:39350470-39350289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr2:65587175-65587356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr2:21410238-21410431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr2:18997738-18997919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr2:33251070-33250885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
323-508
               

               
Cow position:
               
chr2:16481842-16481653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 186
               

               
Conread position:
               
323-509
               

               
Cow position:
               
chr2:6311278-6311457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:79939-79754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:485595-485783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:12686771-12686583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 104
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:19017470-19017662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:26694626-26694817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 186
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:41145334-41145525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
117, 186
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:45499183-45498995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 126
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:46227478-46227673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:51181759-51181568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 186
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:53650043-53650223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:56011128-56010946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr2:71437359-71437169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr2:3739826-3739634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr2:36077371-36077566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
105, 186
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr2:39363021-39363219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr2:39590275-39590465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr2:46120623-46120437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr2:53652870-53653064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr2:71622028-71621841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr2:11001051-11000856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 187
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr2:12873430-12873615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
323-514
               

               
Cow position:
               
chr2:18621435-18621624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
323-514
               

               
Cow position:
               
chr2:72541316-72541126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
323-514
               

               
Cow position:
               
chr2:74249209-74249010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
91, 132
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:3931705-3931517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:8843810-8843613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:10505594-10505399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:16667956-16668147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:43474194-43474390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:47090781-47090978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:48525523-48525319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:62743989-62743797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr2:67596001-67595804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
323-516
               

               
Cow position:
               
chr2:41248590-41248780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr2:7194230-7194424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr2:17328769-17328963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
181, 91
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr2:33471969-33471780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr2:40257393-40257200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
323-522
               

               
Cow position:
               
chr2:22759959-22759756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
108, 128
               

               
Conread position:
               
323-522
               

               
Cow position:
               
chr2:56350898-56350695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
104, 132
               

               
Conread position:
               
323-523
               

               
Cow position:
               
chr2:43131114-43131319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr2:41452252-41452454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr2:43591354-43591154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr2:44022787-44022584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 180
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr2:65603616-65603418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:28820383-28820592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:44215522-44215722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:45567235-45567037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:52345945-52345741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:59180093-59180295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 121
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr2:67927776-67927573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 117
               

               
Conread position:
               
323-526
               

               
Cow position:
               
chr2:37791477-37791273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
117, 186
               

               
Conread position:
               
323-526
               

               
Cow position:
               
chr2:41462405-41462200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 126
               

               
Conread position:
               
323-526
               

               
Cow position:
               
chr2:46164481-46164278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
324-486
               

               
Cow position:
               
chr2:61480608-61480775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
324-490
               

               
Cow position:
               
chr2:9416774-9416615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
324-497
               

               
Cow position:
               
chr2:77941648-77941478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr2:24570132-24569967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr2:29255207-29255034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
324-510
               

               
Cow position:
               
chr2:26574780-26574963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
324-510
               

               
Cow position:
               
chr2:47784625-47784807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
324-510
               

               
Cow position:
               
chr2:73923832-73924021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 126
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr2:6952488-6952678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr2:67047439-67047635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
324-524
               

               
Cow position:
               
chr2:971844-972034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
324-525
               

               
Cow position:
               
chr2:70449046-70449240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
325-431
               

               
Cow position:
               
chr2:44004978-44005082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
325-436
               

               
Cow position:
               
chr2:81473993-81474104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-497
               

               
Cow position:
               
chr2:58869142-58868965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
325-498
               

               
Cow position:
               
chr2:67576120-67576298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
325-505
               

               
Cow position:
               
chr2:53501014-53500844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
325-505
               

               
Cow position:
               
chr2:57733455-57733630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
325-505
               

               
Cow position:
               
chr2:65928821-65928637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
325-510
               

               
Cow position:
               
chr2:37652269-37652462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
325-514
               

               
Cow position:
               
chr2:72342836-72342643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
108, 180
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr2:29343386-29343190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr2:44620607-44620799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
325-521
               

               
Cow position:
               
chr2:5113864-5114064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
325-522
               

               
Cow position:
               
chr2:41351165-41350967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
113, 177
               

               
Conread position:
               
325-524
               

               
Cow position:
               
chr2:43994956-43995152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
325-525
               

               
Cow position:
               
chr2:30012742-30012540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
325-526
               

               
Cow position:
               
chr2:1364578-1364373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
325-526
               

               
Cow position:
               
chr2:30161868-30161665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 125
               

               
Conread position:
               
326-515
               

               
Cow position:
               
chr2:34989348-34989163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
326-524
               

               
Cow position:
               
chr2:85794947-85794749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
328-491
               

               
Cow position:
               
chr2:37973304-37973135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
328-497
               

               
Cow position:
               
chr2:24859037-24859199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
328-498
               

               
Cow position:
               
chr2:46378769-46378596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
328-502
               

               
Cow position:
               
chr2:8576028-8576199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
328-505
               

               
Cow position:
               
chr2:24126670-24126848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
328-507
               

               
Cow position:
               
chr2:47784808-47784990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr2:68390758-68390940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
109, 116
               

               
Conread position:
               
328-510
               

               
Cow position:
               
chr2:21074103-21073917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 181
               

               
Conread position:
               
328-510
               

               
Cow position:
               
chr2:22677216-22677402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
328-510
               

               
Cow position:
               
chr2:38619412-38619230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 143
               

               
Conread position:
               
328-512
               

               
Cow position:
               
chr2:50432882-50433063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr2:13317606-13317797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr2:23712897-23713087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr2:36124457-36124644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr2:50825653-50825845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 112
               

               
Conread position:
               
328-516
               

               
Cow position:
               
chr2:41651374-41651178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
328-517
               

               
Cow position:
               
chr2:38947416-38947236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
328-521
               

               
Cow position:
               
chr2:81243935-81244130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr2:12139525-12139322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr2:66916683-66916489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
328-526
               

               
Cow position:
               
chr2:42897689-42897890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
329-490
               

               
Cow position:
               
chr2:25283140-25283301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 119
               

               
Conread position:
               
329-498
               

               
Cow position:
               
chr2:69780146-69779971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
329-507
               

               
Cow position:
               
chr2:46015946-46015769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
329-515
               

               
Cow position:
               
chr2:50013383-50013569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
329-525
               

               
Cow position:
               
chr2:26454629-26454428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
330-491
               

               
Cow position:
               
chr2:16669494-16669659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
330-514
               

               
Cow position:
               
chr2:84344125-84343935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
331-515
               

               
Cow position:
               
chr2:69109322-69109132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
332-428
               

               
Cow position:
               
chr2:44023063-44022968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
332-511
               

               
Cow position:
               
chr2:24669392-24669578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
333-489
               

               
Cow position:
               
chr2:42255464-42255617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
333-510
               

               
Cow position:
               
chr2:37059140-37058961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 117
               

               
Conread position:
               
333-510
               

               
Cow position:
               
chr2:63568739-63568917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
333-515
               

               
Cow position:
               
chr2:53567517-53567697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
334-488
               

               
Cow position:
               
chr2:69350535-69350382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
334-491
               

               
Cow position:
               
chr2:13328974-13328818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chr2:78256320-78256490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
334-505
               

               
Cow position:
               
chr2:19494244-19494416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 116
               

               
Conread position:
               
334-505
               

               
Cow position:
               
chr2:82580898-82580734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
334-515
               

               
Cow position:
               
chr2:66237226-66237412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
334-517
               

               
Cow position:
               
chr2:21327244-21327424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
334-524
               

               
Cow position:
               
chr2:2485874-2486065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
334-524
               

               
Cow position:
               
chr2:31122912-31123087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
172, 80
               

               
Conread position:
               
334-525
               

               
Cow position:
               
chr2:81354435-81354623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
335-435
               

               
Cow position:
               
chr2:5815988-5815888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
335-464
               

               
Cow position:
               
chr2:16409503-16409635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
335-496
               

               
Cow position:
               
chr2:51099944-51099780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
335-498
               

               
Cow position:
               
chr2:1888637-1888480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
335-510
               

               
Cow position:
               
chr2:37009441-37009611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
335-510
               

               
Cow position:
               
chr2:43139625-43139449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
335-515
               

               
Cow position:
               
chr2:2031980-2031799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr2:41311242-41311063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
336-510
               

               
Cow position:
               
chr2:39059115-39059285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
336-515
               

               
Cow position:
               
chr2:47165798-47165617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
336-515
               

               
Cow position:
               
chr2:59992220-59992038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
336-521
               

               
Cow position:
               
chr2:30127258-30127072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
336-526
               

               
Cow position:
               
chr2:78116331-78116131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
337-511
               

               
Cow position:
               
chr2:39483516-39483696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
337-515
               

               
Cow position:
               
chr2:20337060-20336878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
337-524
               

               
Cow position:
               
chr2:44313686-44313494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
338-515
               

               
Cow position:
               
chr2:58153738-58153916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
338-518
               

               
Cow position:
               
chr2:21953494-21953318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
339-490
               

               
Cow position:
               
chr2:41459127-41459285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
340-435
               

               
Cow position:
               
chr2:69775600-69775504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
341-435
               

               
Cow position:
               
chr2:39484665-39484571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-515
               

               
Cow position:
               
chr2:55526737-55526562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
341-525
               

               
Cow position:
               
chr2:51417262-51417086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
343-505
               

               
Cow position:
               
chr2:85392201-85392040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
343-507
               

               
Cow position:
               
chr2:30384229-30384062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
343-510
               

               
Cow position:
               
chr2:56771468-56771298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
343-514
               

               
Cow position:
               
chr2:44065612-44065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
343-521
               

               
Cow position:
               
chr2:72359596-72359411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
343-525
               

               
Cow position:
               
chr2:19842827-19843005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
344-488
               

               
Cow position:
               
chr2:50368231-50368383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
344-515
               

               
Cow position:
               
chr2:28872932-28873103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
344-520
               

               
Cow position:
               
chr2:47111670-47111844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
344-521
               

               
Cow position:
               
chr2:46609996-46610173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
345-525
               

               
Cow position:
               
chr2:36376899-36377082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
345-525
               

               
Cow position:
               
chr2:38700341-38700155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
345-526
               

               
Cow position:
               
chr2:16751838-16751653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
347-515
               

               
Cow position:
               
chr2:52861588-52861426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
348-498
               

               
Cow position:
               
chr2:40508553-40508398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
348-512
               

               
Cow position:
               
chr2:79687487-79687331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
348-521
               

               
Cow position:
               
chr2:71892520-71892698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
348-526
               

               
Cow position:
               
chr2:55278547-55278362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
348-526
               

               
Cow position:
               
chr2:73650450-73650633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
349-498
               

               
Cow position:
               
chr2:78249781-78249935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr2:73981677-73981837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr2:8859092-8859263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr2:19058203-19058363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr2:13544041-13544202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
351-517
               

               
Cow position:
               
chr2:45597027-45597191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
352-490
               

               
Cow position:
               
chr2:14313463-14313605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
352-517
               

               
Cow position:
               
chr2:74013023-74012852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
352-521
               

               
Cow position:
               
chr2:45895323-45895482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
353-515
               

               
Cow position:
               
chr2:58070041-58070208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
353-523
               

               
Cow position:
               
chr2:1036340-1036166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
353-525
               

               
Cow position:
               
chr2:47123510-47123330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
354-489
               

               
Cow position:
               
chr2:82304001-82304135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
354-512
               

               
Cow position:
               
chr2:21916686-21916525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
354-514
               

               
Cow position:
               
chr2:26159921-26160091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
355-515
               

               
Cow position:
               
chr2:31410418-31410576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
355-515
               

               
Cow position:
               
chr2:67621392-67621552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
355-516
               

               
Cow position:
               
chr2:49832912-49832753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
356-493
               

               
Cow position:
               
chr2:68190590-68190456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
356-516
               

               
Cow position:
               
chr2:58336171-58336008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
356-525
               

               
Cow position:
               
chr2:1205356-1205525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
356-525
               

               
Cow position:
               
chr2:25284087-25284259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
357-497
               

               
Cow position:
               
chr2:3728079-3728218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
357-498
               

               
Cow position:
               
chr2:62688191-62688335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
357-505
               

               
Cow position:
               
chr2:77140527-77140379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 91
               

               
Conread position:
               
357-526
               

               
Cow position:
               
chr2:67810989-67810818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
358-515
               

               
Cow position:
               
chr2:38911125-38910969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
358-523
               

               
Cow position:
               
chr2:39187425-39187588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
359-505
               

               
Cow position:
               
chr2:69003103-69003247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
359-515
               

               
Cow position:
               
chr2:66027611-66027770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
359-521
               

               
Cow position:
               
chr2:46240131-46239976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
360-515
               

               
Cow position:
               
chr2:80237350-80237190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
361-483
               

               
Cow position:
               
chr2:13721949-13722068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
363-521
               

               
Cow position:
               
chr2:45799871-45799706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
367-498
               

               
Cow position:
               
chr2:8550617-8550484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
368-510
               

               
Cow position:
               
chr2:19530831-19530977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
371-507
               

               
Cow position:
               
chr2:60903744-60903883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
371-515
               

               
Cow position:
               
chr2:56021378-56021527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
374-510
               

               
Cow position:
               
chr2:15720705-15720837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
375-515
               

               
Cow position:
               
chr2:45899604-45899745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
380-521
               

               
Cow position:
               
chr2:22496232-22496096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
382-524
               

               
Cow position:
               
chr2:39864501-39864647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
388-510
               

               
Cow position:
               
chr2:28452862-28452741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               
Show alignments to all cow chromosomes.