Non-Coding RNA Search

Cow genome map


           Conread name:
           Emb1-C0005212_G09
        

               Conread position:
               296-505
               

               Cow position:
               chr3:57274020-57274236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 161
               

               Conread position:
               298-477
               

               Cow position:
               chr3:18326862-18326676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 154
               

               Conread position:
               298-497
               

               Cow position:
               chr3:16333765-16333974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               298-515
               

               Cow position:
               chr3:4120398-4120183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               299-498
               

               Cow position:
               chr3:65236987-65237194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               299-524
               

               Cow position:
               chr3:18831384-18831615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               301-421
               

               Cow position:
               chr3:11292283-11292157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 120
               

               Conread position:
               301-428
               

               Cow position:
               chr3:56704356-56704222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               301-432
               

               Cow position:
               chr3:57760463-57760601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               301-435
               

               Cow position:
               chr3:2680481-2680619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               301-435
               

               Cow position:
               chr3:14263362-14263498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               301-435
               

               Cow position:
               chr3:52863219-52863077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               301-487
               

               Cow position:
               chr3:11987294-11987488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               301-487
               

               Cow position:
               chr3:39988270-39988092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               301-489
               

               Cow position:
               chr3:7566452-7566259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               301-490
               

               Cow position:
               chr3:4319676-4319882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 159
               

               Conread position:
               301-490
               

               Cow position:
               chr3:30357487-30357672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               301-490
               

               Cow position:
               chr3:53046694-53046495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               23, 154
               

               Conread position:
               301-490
               

               Cow position:
               chr3:57577662-57577859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               301-490
               

               Cow position:
               chr3:66900768-66900564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 194
               

               Conread position:
               301-490
               

               Cow position:
               chr3:73395082-73395278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               301-490
               

               Cow position:
               chr3:75238422-75238623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               301-493
               

               Cow position:
               chr3:6182256-6182066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               301-493
               

               Cow position:
               chr3:13329808-13329627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               301-493
               

               Cow position:
               chr3:65969132-65969340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               301-497
               

               Cow position:
               chr3:3698624-3698814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               301-497
               

               Cow position:
               chr3:10668914-10668709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 115
               

               Conread position:
               301-498
               

               Cow position:
               chr3:28908238-28908045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 120
               

               Conread position:
               301-498
               

               Cow position:
               chr3:60597509-60597708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 129
               

               Conread position:
               301-498
               

               Cow position:
               chr3:81234354-81234559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 155
               

               Conread position:
               301-502
               

               Cow position:
               chr3:54903538-54903742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               301-502
               

               Cow position:
               chr3:60933382-60933593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 157
               

               Conread position:
               301-505
               

               Cow position:
               chr3:39248059-39247854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               301-505
               

               Cow position:
               chr3:52456883-52457087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               301-505
               

               Cow position:
               chr3:67520204-67519998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               301-505
               

               Cow position:
               chr3:76268010-76267797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               301-506
               

               Cow position:
               chr3:51234129-51233925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               301-507
               

               Cow position:
               chr3:54905583-54905786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               21, 117
               

               Conread position:
               301-507
               

               Cow position:
               chr3:61224779-61224569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               301-509
               

               Cow position:
               chr3:71423586-71423387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               301-510
               

               Cow position:
               chr3:3985292-3985498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 115
               

               Conread position:
               301-510
               

               Cow position:
               chr3:18067106-18067313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               139, 32
               

               Conread position:
               301-510
               

               Cow position:
               chr3:33290107-33289896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               301-510
               

               Cow position:
               chr3:48468138-48468358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 156
               

               Conread position:
               301-510
               

               Cow position:
               chr3:75222468-75222687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               301-510
               

               Cow position:
               chr3:76713355-76713129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               301-511
               

               Cow position:
               chr3:2392997-2392787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               301-512
               

               Cow position:
               chr3:13301885-13301665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               301-512
               

               Cow position:
               chr3:23920464-23920243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               44, 156
               

               Conread position:
               301-514
               

               Cow position:
               chr3:48900367-48900143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               301-514
               

               Cow position:
               chr3:75479968-75480185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               301-515
               

               Cow position:
               chr3:5040342-5040114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               301-515
               

               Cow position:
               chr3:7337817-7337600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               301-515
               

               Cow position:
               chr3:15443763-15443538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               301-515
               

               Cow position:
               chr3:15973531-15973758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               23, 160
               

               Conread position:
               301-515
               

               Cow position:
               chr3:18059667-18059892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               301-515
               

               Cow position:
               chr3:30180050-30180271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               301-515
               

               Cow position:
               chr3:36375571-36375350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               301-515
               

               Cow position:
               chr3:54067762-54067982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 180
               

               Conread position:
               301-515
               

               Cow position:
               chr3:54551747-54551523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               301-515
               

               Cow position:
               chr3:70762155-70761935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               301-516
               

               Cow position:
               chr3:49119061-49118842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               301-517
               

               Cow position:
               chr3:23408391-23408177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               301-520
               

               Cow position:
               chr3:7661821-7662052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               30, 157
               

               Conread position:
               301-520
               

               Cow position:
               chr3:58527353-58527568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               301-520
               

               Cow position:
               chr3:65058665-65058896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               301-521
               

               Cow position:
               chr3:3656479-3656710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               301-521
               

               Cow position:
               chr3:9120810-9121036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 178
               

               Conread position:
               301-521
               

               Cow position:
               chr3:23169098-23168876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 178
               

               Conread position:
               301-521
               

               Cow position:
               chr3:50768644-50768872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               13, 156
               

               Conread position:
               301-521
               

               Cow position:
               chr3:71238119-71238346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               301-523
               

               Cow position:
               chr3:79884517-79884284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               301-524
               

               Cow position:
               chr3:15051983-15051753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               301-524
               

               Cow position:
               chr3:37851467-37851691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 189
               

               Conread position:
               301-524
               

               Cow position:
               chr3:53270795-53271032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 159
               

               Conread position:
               301-525
               

               Cow position:
               chr3:15228858-15228645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               23, 120
               

               Conread position:
               301-525
               

               Cow position:
               chr3:32787425-32787660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               301-525
               

               Cow position:
               chr3:36160228-36160002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 153
               

               Conread position:
               301-525
               

               Cow position:
               chr3:39873728-39873511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               301-525
               

               Cow position:
               chr3:45211266-45211501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 215
               

               Conread position:
               301-525
               

               Cow position:
               chr3:55712405-55712629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               301-525
               

               Cow position:
               chr3:59604811-59605040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               301-526
               

               Cow position:
               chr3:83889212-83889448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               302-430
               

               Cow position:
               chr3:61278877-61279009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               302-488
               

               Cow position:
               chr3:81087670-81087475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               302-490
               

               Cow position:
               chr3:52652115-52651917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 156
               

               Conread position:
               302-498
               

               Cow position:
               chr3:46559749-46559545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               303-434
               

               Cow position:
               chr3:12711948-12711810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               303-489
               

               Cow position:
               chr3:48478062-48477881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               303-490
               

               Cow position:
               chr3:23753467-23753647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               303-490
               

               Cow position:
               chr3:82056145-82055965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               303-505
               

               Cow position:
               chr3:75050649-75050445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               303-510
               

               Cow position:
               chr3:24468413-24468200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 149
               

               Conread position:
               303-515
               

               Cow position:
               chr3:29813212-29813415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               202, 20
               

               Conread position:
               303-524
               

               Cow position:
               chr3:3556512-3556745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 157
               

               Conread position:
               303-524
               

               Cow position:
               chr3:82366096-82366323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               23, 154
               

               Conread position:
               304-485
               

               Cow position:
               chr3:11640701-11640894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               304-490
               

               Cow position:
               chr3:59000784-59000600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               156
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               304-498
               

               Cow position:
               chr3:5703146-5703347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               304-512
               

               Cow position:
               chr3:2648536-2648323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               304-523
               

               Cow position:
               chr3:48241586-48241803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               304-526
               

               Cow position:
               chr3:9663198-9662973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               15, 147
               

               Conread position:
               305-465
               

               Cow position:
               chr3:25038018-25037856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               305-498
               

               Cow position:
               chr3:20802651-20802469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               305-505
               

               Cow position:
               chr3:25477775-25477969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               305-506
               

               Cow position:
               chr3:48363045-48363248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               305-510
               

               Cow position:
               chr3:2674998-2675215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               305-515
               

               Cow position:
               chr3:24220601-24220393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               306-515
               

               Cow position:
               chr3:4071793-4071583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               307-514
               

               Cow position:
               chr3:23640320-23640527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               307-517
               

               Cow position:
               chr3:14518108-14517893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               307-525
               

               Cow position:
               chr3:77582080-77582302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               308-435
               

               Cow position:
               chr3:61133618-61133744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               308-502
               

               Cow position:
               chr3:20888682-20888486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               135, 43
               

               Conread position:
               309-515
               

               Cow position:
               chr3:3889588-3889390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               310-436
               

               Cow position:
               chr3:59884089-59883963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 112
               

               Conread position:
               310-511
               

               Cow position:
               chr3:23471479-23471277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               310-525
               

               Cow position:
               chr3:79893518-79893299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               311-505
               

               Cow position:
               chr3:56582831-56583026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 6
               

               Conread position:
               311-514
               

               Cow position:
               chr3:62046645-62046855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 198
               

               Conread position:
               312-498
               

               Cow position:
               chr3:4931857-4931659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               312-505
               

               Cow position:
               chr3:26904094-26904277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               312-515
               

               Cow position:
               chr3:16710817-16710611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 193
               

               Conread position:
               312-515
               

               Cow position:
               chr3:68289658-68289868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               312-520
               

               Cow position:
               chr3:80172981-80173193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               313-435
               

               Cow position:
               chr3:49790829-49790706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               313-438
               

               Cow position:
               chr3:48374700-48374821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               313-470
               

               Cow position:
               chr3:72391065-72391231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 141
               

               Conread position:
               313-497
               

               Cow position:
               chr3:28897040-28896851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               313-497
               

               Cow position:
               chr3:36189873-36190068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 193
               

               Conread position:
               313-498
               

               Cow position:
               chr3:3032388-3032580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               313-498
               

               Cow position:
               chr3:15160503-15160688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               6, 132
               

               Conread position:
               313-498
               

               Cow position:
               chr3:22889034-22888843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               6, 141
               

               Conread position:
               313-498
               

               Cow position:
               chr3:56943941-56943759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               313-498
               

               Cow position:
               chr3:68648160-68648348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               313-505
               

               Cow position:
               chr3:45700791-45700979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               113, 5
               

               Conread position:
               313-505
               

               Cow position:
               chr3:54434960-54435146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               313-505
               

               Cow position:
               chr3:59474105-59474297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               6, 140
               

               Conread position:
               313-507
               

               Cow position:
               chr3:39996906-39996715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               313-507
               

               Cow position:
               chr3:53875782-53875582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               313-510
               

               Cow position:
               chr3:11027259-11027459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               106, 12
               

               Conread position:
               313-510
               

               Cow position:
               chr3:18248935-18249137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 197
               

               Conread position:
               313-510
               

               Cow position:
               chr3:45823039-45822837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 197
               

               Conread position:
               313-510
               

               Cow position:
               chr3:53604763-53604561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               313-510
               

               Cow position:
               chr3:53910092-53910289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               109, 135
               

               Conread position:
               313-510
               

               Cow position:
               chr3:69144676-69144878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               6, 197
               

               Conread position:
               313-514
               

               Cow position:
               chr3:22899748-22899544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               313-514
               

               Cow position:
               chr3:73837735-73837532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               313-514
               

               Cow position:
               chr3:83491069-83491265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               313-515
               

               Cow position:
               chr3:33252904-33252706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               313-515
               

               Cow position:
               chr3:48252868-48253067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               313-515
               

               Cow position:
               chr3:68587006-68587207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               313-515
               

               Cow position:
               chr3:78071807-78071605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               101, 136
               

               Conread position:
               313-515
               

               Cow position:
               chr3:79271726-79271521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 5
               

               Conread position:
               313-517
               

               Cow position:
               chr3:14552858-14553062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 135
               

               Conread position:
               313-517
               

               Cow position:
               chr3:28902778-28902572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               313-521
               

               Cow position:
               chr3:20841888-20841687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               117, 5
               

               Conread position:
               313-524
               

               Cow position:
               chr3:59317687-59317897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 5
               

               Conread position:
               313-525
               

               Cow position:
               chr3:55248567-55248784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               313-525
               

               Cow position:
               chr3:83934708-83934920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               313-526
               

               Cow position:
               chr3:79272590-79272377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               6, 103
               

               Conread position:
               314-493
               

               Cow position:
               chr3:16867808-16867989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 84
               

               Conread position:
               314-509
               

               Cow position:
               chr3:38331627-38331430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               123, 101
               

               Conread position:
               315-441
               

               Cow position:
               chr3:15683167-15683042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               315-490
               

               Cow position:
               chr3:2637909-2638096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               315-498
               

               Cow position:
               chr3:9718268-9718078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 137
               

               Conread position:
               315-498
               

               Cow position:
               chr3:20997019-20996831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 108
               

               Conread position:
               315-509
               

               Cow position:
               chr3:35883949-35883752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               315-510
               

               Cow position:
               chr3:21694210-21694411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 138
               

               Conread position:
               315-512
               

               Cow position:
               chr3:75966800-75966599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               315-513
               

               Cow position:
               chr3:27246976-27246782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               315-514
               

               Cow position:
               chr3:78443586-78443379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               315-515
               

               Cow position:
               chr3:62789967-62789763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               99, 8
               

               Conread position:
               315-519
               

               Cow position:
               chr3:22868733-22868524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               316-489
               

               Cow position:
               chr3:68624203-68624381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               316-498
               

               Cow position:
               chr3:53150317-53150504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               316-498
               

               Cow position:
               chr3:54350454-54350263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               106, 141
               

               Conread position:
               317-470
               

               Cow position:
               chr3:48002110-48001963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               317-496
               

               Cow position:
               chr3:80910583-80910766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               117, 97
               

               Conread position:
               317-505
               

               Cow position:
               chr3:45881886-45882076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 131
               

               Conread position:
               317-515
               

               Cow position:
               chr3:4268588-4268388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               117, 98
               

               Conread position:
               317-515
               

               Cow position:
               chr3:15388207-15388407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               120, 134
               

               Conread position:
               317-515
               

               Cow position:
               chr3:39606028-39605827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 187
               

               Conread position:
               317-515
               

               Cow position:
               chr3:63844925-63845129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               317-515
               

               Cow position:
               chr3:70676217-70676417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               317-516
               

               Cow position:
               chr3:61680303-61680503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               317-517
               

               Cow position:
               chr3:8147538-8147331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               317-517
               

               Cow position:
               chr3:68303301-68303507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               5, 135
               

               Conread position:
               318-435
               

               Cow position:
               chr3:1534116-1533998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               318-435
               

               Cow position:
               chr3:28898234-28898116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               318-467
               

               Cow position:
               chr3:58432456-58432307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 127
               

               Conread position:
               318-487
               

               Cow position:
               chr3:28884172-28884002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               111, 66
               

               Conread position:
               318-490
               

               Cow position:
               chr3:40145453-40145630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               96, 132
               

               Conread position:
               318-490
               

               Cow position:
               chr3:51609197-51609021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               101, 131
               

               Conread position:
               318-497
               

               Cow position:
               chr3:19006130-19006313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               123, 66
               

               Conread position:
               318-497
               

               Cow position:
               chr3:23203242-23203059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 59
               

               Conread position:
               318-497
               

               Cow position:
               chr3:59040558-59040740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               318-498
               

               Cow position:
               chr3:4271361-4271536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               318-498
               

               Cow position:
               chr3:4549016-4549188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               318-498
               

               Cow position:
               chr3:14546991-14547170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 60
               

               Conread position:
               318-498
               

               Cow position:
               chr3:18459539-18459366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               318-498
               

               Cow position:
               chr3:26783518-26783336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               318-498
               

               Cow position:
               chr3:59268360-59268545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               318-498
               

               Cow position:
               chr3:59828404-59828217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               318-499
               

               Cow position:
               chr3:82195475-82195656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               318-502
               

               Cow position:
               chr3:25735917-25735728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 135
               

               Conread position:
               318-502
               

               Cow position:
               chr3:45314333-45314527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               318-505
               

               Cow position:
               chr3:3584702-3584892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 86
               

               Conread position:
               318-505
               

               Cow position:
               chr3:19711349-19711159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               318-505
               

               Cow position:
               chr3:58765086-58764909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               318-505
               

               Cow position:
               chr3:70333976-70333791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               318-507
               

               Cow position:
               chr3:80023320-80023135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               318-508
               

               Cow position:
               chr3:70402633-70402819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               318-510
               

               Cow position:
               chr3:986003-986198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               318-510
               

               Cow position:
               chr3:13882532-13882337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               318-510
               

               Cow position:
               chr3:18479309-18479115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               318-510
               

               Cow position:
               chr3:21867049-21866855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               318-510
               

               Cow position:
               chr3:31309365-31309171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               111, 132
               

               Conread position:
               318-510
               

               Cow position:
               chr3:34871556-34871748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               123, 54
               

               Conread position:
               318-510
               

               Cow position:
               chr3:41366721-41366518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 198
               

               Conread position:
               318-510
               

               Cow position:
               chr3:50350980-50350795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               318-510
               

               Cow position:
               chr3:73589782-73589583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               318-512
               

               Cow position:
               chr3:1517523-1517328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               119, 131
               

               Conread position:
               318-512
               

               Cow position:
               chr3:17304990-17304787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               318-514
               

               Cow position:
               chr3:29891420-29891219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               318-514
               

               Cow position:
               chr3:35624556-35624356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               125, 80
               

               Conread position:
               318-515
               

               Cow position:
               chr3:17134323-17134517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               318-515
               

               Cow position:
               chr3:32127416-32127234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               318-515
               

               Cow position:
               chr3:55970496-55970701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               318-516
               

               Cow position:
               chr3:45667357-45667152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               318-516
               

               Cow position:
               chr3:61024034-61023833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               111, 132
               

               Conread position:
               318-516
               

               Cow position:
               chr3:63860622-63860420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               318-517
               

               Cow position:
               chr3:29234690-29234488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               318-520
               

               Cow position:
               chr3:1011475-1011683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               318-520
               

               Cow position:
               chr3:43389139-43388934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               112, 132
               

               Conread position:
               318-520
               

               Cow position:
               chr3:51578332-51578130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               318-521
               

               Cow position:
               chr3:15153680-15153881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               318-521
               

               Cow position:
               chr3:58101668-58101867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               100, 56
               

               Conread position:
               318-521
               

               Cow position:
               chr3:71497149-71496935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               318-522
               

               Cow position:
               chr3:12978628-12978420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               119, 97
               

               Conread position:
               318-522
               

               Cow position:
               chr3:64800561-64800354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               105, 135
               

               Conread position:
               318-525
               

               Cow position:
               chr3:27286507-27286714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               185, 126
               

               Conread position:
               318-526
               

               Cow position:
               chr3:4518192-4517986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               318-526
               

               Cow position:
               chr3:68145854-68145652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               181, 56
               

               Conread position:
               319-521
               

               Cow position:
               chr3:81616463-81616258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 134
               

               Conread position:
               320-511
               

               Cow position:
               chr3:40100728-40100545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               321-497
               

               Cow position:
               chr3:59271823-59272001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               321-505
               

               Cow position:
               chr3:8523163-8522976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               321-512
               

               Cow position:
               chr3:12090665-12090860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               321-515
               

               Cow position:
               chr3:38248647-38248842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               321-516
               

               Cow position:
               chr3:56949098-56948907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               321-521
               

               Cow position:
               chr3:72745573-72745360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 139
               

               Conread position:
               322-505
               

               Cow position:
               chr3:18686897-18687078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               8, 94
               

               Conread position:
               322-505
               

               Cow position:
               chr3:54557667-54557844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               322-505
               

               Cow position:
               chr3:74644550-74644738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               106, 131
               

               Conread position:
               322-515
               

               Cow position:
               chr3:13241083-13240887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               106, 128
               

               Conread position:
               323-417
               

               Cow position:
               chr3:39157654-39157561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               323-425
               

               Cow position:
               chr3:2216362-2216464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-432
               

               Cow position:
               chr3:49382943-49383051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               323-440
               

               Cow position:
               chr3:2179113-2179227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               323-465
               

               Cow position:
               chr3:38783600-38783746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               323-483
               

               Cow position:
               chr3:70431424-70431590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               323-483
               

               Cow position:
               chr3:80709873-80709708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               323-486
               

               Cow position:
               chr3:2483998-2484161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               139, 121
               

               Conread position:
               323-486
               

               Cow position:
               chr3:4050187-4050340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               323-490
               

               Cow position:
               chr3:19793596-19793427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 47
               

               Conread position:
               323-491
               

               Cow position:
               chr3:5003627-5003796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 126
               

               Conread position:
               323-493
               

               Cow position:
               chr3:83199505-83199679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               323-496
               

               Cow position:
               chr3:49679126-49679303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               323-496
               

               Cow position:
               chr3:56476676-56476843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               323-496
               

               Cow position:
               chr3:70756648-70756470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               323-497
               

               Cow position:
               chr3:11281760-11281939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               112, 127
               

               Conread position:
               323-497
               

               Cow position:
               chr3:19709104-19709275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               323-497
               

               Cow position:
               chr3:31115276-31115108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               323-497
               

               Cow position:
               chr3:49363103-49363277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               104, 125
               

               Conread position:
               323-498
               

               Cow position:
               chr3:7860259-7860079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:17058552-17058376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:17936845-17936676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               77, 95
               

               Conread position:
               323-498
               

               Cow position:
               chr3:23105368-23105194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:23132175-23131997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 128
               

               Conread position:
               323-498
               

               Cow position:
               chr3:26970807-26970982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 125
               

               Conread position:
               323-498
               

               Cow position:
               chr3:35074872-35075043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:37641319-37641497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               323-498
               

               Cow position:
               chr3:43233500-43233674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:49996727-49996546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:59681910-59681736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               323-498
               

               Cow position:
               chr3:84154409-84154576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               323-505
               

               Cow position:
               chr3:31361419-31361602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               114, 125
               

               Conread position:
               323-505
               

               Cow position:
               chr3:76269886-76270066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               323-505
               

               Cow position:
               chr3:81666793-81666975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 122
               

               Conread position:
               323-505
               

               Cow position:
               chr3:84928097-84928284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 131
               

               Conread position:
               323-507
               

               Cow position:
               chr3:82084812-82085001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               323-509
               

               Cow position:
               chr3:84174295-84174485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               112, 186
               

               Conread position:
               323-510
               

               Cow position:
               chr3:3164116-3163934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               91, 84
               

               Conread position:
               323-510
               

               Cow position:
               chr3:14770888-14770704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               323-510
               

               Cow position:
               chr3:45743900-45744092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               323-510
               

               Cow position:
               chr3:46271795-46271604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 83
               

               Conread position:
               323-510
               

               Cow position:
               chr3:55177752-55177567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               181, 101
               

               Conread position:
               323-510
               

               Cow position:
               chr3:59702165-59702357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               323-510
               

               Cow position:
               chr3:59885534-59885713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               323-510
               

               Cow position:
               chr3:59945118-59945311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 130
               

               Conread position:
               323-510
               

               Cow position:
               chr3:59947659-59947849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               107, 127
               

               Conread position:
               323-510
               

               Cow position:
               chr3:83705543-83705353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               118, 23
               

               Conread position:
               323-514
               

               Cow position:
               chr3:55730475-55730281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               108, 127
               

               Conread position:
               323-515
               

               Cow position:
               chr3:210313-210510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               105, 130
               

               Conread position:
               323-515
               

               Cow position:
               chr3:15859385-15859195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               81, 72
               

               Conread position:
               323-515
               

               Cow position:
               chr3:18393398-18393212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               166, 5
               

               Conread position:
               323-515
               

               Cow position:
               chr3:19792899-19793084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               323-515
               

               Cow position:
               chr3:22165421-22165227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               323-515
               

               Cow position:
               chr3:36412094-36411902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               323-515
               

               Cow position:
               chr3:40213040-40212848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               104, 126
               

               Conread position:
               323-515
               

               Cow position:
               chr3:58452042-58452233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               323-515
               

               Cow position:
               chr3:60264722-60264534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               323-515
               

               Cow position:
               chr3:80958517-80958324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               323-516
               

               Cow position:
               chr3:44207884-44207690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               323-516
               

               Cow position:
               chr3:72342239-72342435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               111, 127
               

               Conread position:
               323-516
               

               Cow position:
               chr3:75853334-75853148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               323-517
               

               Cow position:
               chr3:11254174-11253976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               111, 186
               

               Conread position:
               323-519
               

               Cow position:
               chr3:20911416-20911217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               106, 127
               

               Conread position:
               323-521
               

               Cow position:
               chr3:19044772-19044575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               323-521
               

               Cow position:
               chr3:30463178-30462982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               323-521
               

               Cow position:
               chr3:84137821-84137621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               125, 184
               

               Conread position:
               323-522
               

               Cow position:
               chr3:15795213-15795417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               323-524
               

               Cow position:
               chr3:16362511-16362322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               323-524
               

               Cow position:
               chr3:29334420-29334214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 177
               

               Conread position:
               323-524
               

               Cow position:
               chr3:76155981-76156181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 126
               

               Conread position:
               323-525
               

               Cow position:
               chr3:12669130-12669339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               323-525
               

               Cow position:
               chr3:12705549-12705350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               185, 84
               

               Conread position:
               323-525
               

               Cow position:
               chr3:32317837-32317630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               323-525
               

               Cow position:
               chr3:58134692-58134489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               114, 96
               

               Conread position:
               323-525
               

               Cow position:
               chr3:58614450-58614660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 132
               

               Conread position:
               323-525
               

               Cow position:
               chr3:83215256-83215467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               324-441
               

               Cow position:
               chr3:4086869-4086752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-493
               

               Cow position:
               chr3:48072887-48072720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 122
               

               Conread position:
               324-497
               

               Cow position:
               chr3:64280935-64280768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               324-505
               

               Cow position:
               chr3:12899945-12899768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 40
               

               Conread position:
               324-505
               

               Cow position:
               chr3:67407371-67407189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 125
               

               Conread position:
               324-510
               

               Cow position:
               chr3:27368675-27368482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               324-510
               

               Cow position:
               chr3:44594619-44594806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               113, 16
               

               Conread position:
               324-510
               

               Cow position:
               chr3:54373865-54373674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               324-514
               

               Cow position:
               chr3:20663554-20663357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               105, 184
               

               Conread position:
               324-515
               

               Cow position:
               chr3:26338025-26337830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 126
               

               Conread position:
               324-515
               

               Cow position:
               chr3:76168637-76168444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               110, 126
               

               Conread position:
               324-515
               

               Cow position:
               chr3:81039753-81039561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 158
               

               Conread position:
               324-517
               

               Cow position:
               chr3:28904965-28905161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               109, 126
               

               Conread position:
               324-525
               

               Cow position:
               chr3:55189759-55189553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               324-526
               

               Cow position:
               chr3:56678354-56678147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               324-526
               

               Cow position:
               chr3:79207710-79207515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               324-526
               

               Cow position:
               chr3:80733858-80733649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               325-490
               

               Cow position:
               chr3:59597174-59597336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               325-493
               

               Cow position:
               chr3:62312792-62312964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               325-493
               

               Cow position:
               chr3:62370051-62370223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               325-495
               

               Cow position:
               chr3:1890113-1889938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               325-496
               

               Cow position:
               chr3:77171311-77171487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               325-497
               

               Cow position:
               chr3:31793888-31793711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               325-508
               

               Cow position:
               chr3:17456272-17456088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 126
               

               Conread position:
               325-510
               

               Cow position:
               chr3:25905047-25904858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 180
               

               Conread position:
               325-510
               

               Cow position:
               chr3:72473911-72474103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 183
               

               Conread position:
               325-515
               

               Cow position:
               chr3:14211988-14211798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               325-515
               

               Cow position:
               chr3:71478597-71478777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               325-515
               

               Cow position:
               chr3:78258759-78258563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 130
               

               Conread position:
               325-523
               

               Cow position:
               chr3:77188434-77188632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 127
               

               Conread position:
               325-525
               

               Cow position:
               chr3:84378483-84378281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 179
               

               Conread position:
               327-515
               

               Cow position:
               chr3:21959657-21959852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               104, 181
               

               Conread position:
               328-489
               

               Cow position:
               chr3:13380276-13380116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               328-490
               

               Cow position:
               chr3:72255420-72255255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               328-497
               

               Cow position:
               chr3:67744629-67744471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               328-498
               

               Cow position:
               chr3:59035039-59035214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               328-498
               

               Cow position:
               chr3:60370981-60371155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               328-498
               

               Cow position:
               chr3:72027636-72027810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 28
               

               Conread position:
               328-510
               

               Cow position:
               chr3:2016434-2016615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               328-510
               

               Cow position:
               chr3:23037510-23037325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 80
               

               Conread position:
               328-510
               

               Cow position:
               chr3:76300769-76300957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               328-512
               

               Cow position:
               chr3:15862003-15862178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               328-514
               

               Cow position:
               chr3:76056286-76056103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               328-515
               

               Cow position:
               chr3:6728331-6728133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               328-515
               

               Cow position:
               chr3:46259709-46259899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               328-515
               

               Cow position:
               chr3:48772238-48772043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 70
               

               Conread position:
               328-520
               

               Cow position:
               chr3:22676111-22675916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 125
               

               Conread position:
               328-524
               

               Cow position:
               chr3:18700112-18699911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               98, 125
               

               Conread position:
               328-524
               

               Cow position:
               chr3:55318898-55318701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               328-525
               

               Cow position:
               chr3:38828758-38828945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               329-510
               

               Cow position:
               chr3:77653928-77654102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               329-510
               

               Cow position:
               chr3:80541218-80541405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 82
               

               Conread position:
               330-521
               

               Cow position:
               chr3:73514047-73513870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               330-522
               

               Cow position:
               chr3:60186146-60186348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               330-526
               

               Cow position:
               chr3:53428916-53428719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 119
               

               Conread position:
               331-510
               

               Cow position:
               chr3:59699648-59699469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               332-510
               

               Cow position:
               chr3:53249496-53249667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               333-497
               

               Cow position:
               chr3:63069362-63069191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               333-502
               

               Cow position:
               chr3:67942532-67942358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               333-525
               

               Cow position:
               chr3:22094595-22094418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               334-438
               

               Cow position:
               chr3:85044407-85044303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               334-496
               

               Cow position:
               chr3:20021274-20021437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               96, 112
               

               Conread position:
               334-502
               

               Cow position:
               chr3:17695000-17694827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               334-503
               

               Cow position:
               chr3:53222018-53222188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               334-520
               

               Cow position:
               chr3:74050697-74050512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               170, 101
               

               Conread position:
               334-526
               

               Cow position:
               chr3:32376818-32377011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               113, 171
               

               Conread position:
               335-498
               

               Cow position:
               chr3:59610712-59610548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               335-510
               

               Cow position:
               chr3:64910090-64909913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 120
               

               Conread position:
               335-525
               

               Cow position:
               chr3:19611346-19611155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               336-498
               

               Cow position:
               chr3:34142703-34142541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               101, 7
               

               Conread position:
               336-506
               

               Cow position:
               chr3:43896053-43895884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               336-514
               

               Cow position:
               chr3:47417565-47417385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 115
               

               Conread position:
               337-482
               

               Cow position:
               chr3:49733045-49732895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               337-491
               

               Cow position:
               chr3:2903165-2903021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               337-515
               

               Cow position:
               chr3:11607830-11608005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               338-505
               

               Cow position:
               chr3:31804750-31804593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               340-494
               

               Cow position:
               chr3:56754522-56754368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               340-498
               

               Cow position:
               chr3:74515327-74515165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               75, 112
               

               Conread position:
               340-498
               

               Cow position:
               chr3:77098812-77098653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               340-515
               

               Cow position:
               chr3:55106138-55105958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               91, 110
               

               Conread position:
               340-526
               

               Cow position:
               chr3:35079497-35079306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               97, 169
               

               Conread position:
               342-526
               

               Cow position:
               chr3:49787571-49787754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 106
               

               Conread position:
               343-458
               

               Cow position:
               chr3:18427048-18426935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               343-493
               

               Cow position:
               chr3:10844363-10844216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               343-493
               

               Cow position:
               chr3:74500275-74500423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               343-505
               

               Cow position:
               chr3:36418470-36418309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               343-510
               

               Cow position:
               chr3:7381819-7381650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               88, 164
               

               Conread position:
               343-515
               

               Cow position:
               chr3:79398156-79398333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 107
               

               Conread position:
               343-521
               

               Cow position:
               chr3:57641814-57641997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               343-524
               

               Cow position:
               chr3:44782353-44782535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               343-525
               

               Cow position:
               chr3:66885016-66884837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 104
               

               Conread position:
               343-526
               

               Cow position:
               chr3:57790627-57790813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               343-526
               

               Cow position:
               chr3:82175521-82175709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               344-498
               

               Cow position:
               chr3:2636964-2637116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               344-507
               

               Cow position:
               chr3:3453594-3453761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 161
               

               Conread position:
               344-514
               

               Cow position:
               chr3:3011161-3011331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               345-477
               

               Cow position:
               chr3:32361989-32361857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               345-498
               

               Cow position:
               chr3:7923832-7923991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               345-525
               

               Cow position:
               chr3:13927832-13928016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               345-526
               

               Cow position:
               chr3:32248027-32248210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               347-490
               

               Cow position:
               chr3:57706739-57706589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               86, 103
               

               Conread position:
               347-498
               

               Cow position:
               chr3:2636912-2636763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 27
               

               Conread position:
               347-515
               

               Cow position:
               chr3:58929517-58929344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               75, 103
               

               Conread position:
               347-525
               

               Cow position:
               chr3:69849276-69849102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               348-498
               

               Cow position:
               chr3:621453-621612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               349-497
               

               Cow position:
               chr3:10591484-10591343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               349-526
               

               Cow position:
               chr3:43016431-43016243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               350-475
               

               Cow position:
               chr3:73162370-73162248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               350-498
               

               Cow position:
               chr3:22078096-22078249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               350-505
               

               Cow position:
               chr3:22903732-22903580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               350-510
               

               Cow position:
               chr3:39969841-39969681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 96
               

               Conread position:
               350-523
               

               Cow position:
               chr3:18764122-18764298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 101
               

               Conread position:
               351-485
               

               Cow position:
               chr3:72556791-72556923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               351-493
               

               Cow position:
               chr3:14589212-14589064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               351-498
               

               Cow position:
               chr3:44218787-44218939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               351-510
               

               Cow position:
               chr3:48566670-48566507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 158
               

               Conread position:
               351-517
               

               Cow position:
               chr3:58562715-58562890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               351-521
               

               Cow position:
               chr3:74127487-74127305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               352-503
               

               Cow position:
               chr3:73925015-73924864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               352-506
               

               Cow position:
               chr3:43527761-43527615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               353-505
               

               Cow position:
               chr3:52450449-52450599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               354-465
               

               Cow position:
               chr3:63064453-63064344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               355-486
               

               Cow position:
               chr3:6547449-6547585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 95
               

               Conread position:
               356-524
               

               Cow position:
               chr3:73410313-73410479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               356-526
               

               Cow position:
               chr3:30682999-30682828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               147, 84
               

               Conread position:
               359-520
               

               Cow position:
               chr3:8540537-8540693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               359-520
               

               Cow position:
               chr3:58497687-58497852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 150
               

               Conread position:
               359-526
               

               Cow position:
               chr3:22820885-22821053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               361-510
               

               Cow position:
               chr3:29943888-29944043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 93
               

               Conread position:
               362-514
               

               Cow position:
               chr3:26792495-26792639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               362-516
               

               Cow position:
               chr3:24370434-24370580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               362-525
               

               Cow position:
               chr3:53836674-53836512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               362-525
               

               Cow position:
               chr3:59392095-59391927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               366-525
               

               Cow position:
               chr3:5823506-5823356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               368-498
               

               Cow position:
               chr3:34392182-34392054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               371-508
               

               Cow position:
               chr3:72626704-72626563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               371-509
               

               Cow position:
               chr3:55973036-55972902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               372-524
               

               Cow position:
               chr3:40794667-40794526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               373-525
               

               Cow position:
               chr3:55271948-55271801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               374-519
               

               Cow position:
               chr3:76138502-76138651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               376-525
               

               Cow position:
               chr3:42933527-42933682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               378-521
               

               Cow position:
               chr3:14000502-14000364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               134, 66
               

               Conread position:
               386-525
               

               Cow position:
               chr3:66563839-66563981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               392-525
               

               Cow position:
               chr3:31554996-31555134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               
Show alignments to all cow chromosomes.
Conread position:	296-505
Cow position:	chr3:57274020-57274236 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	161
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	27, 161
Conread position:	298-477
Cow position:	chr3:18326862-18326676 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	138
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	36, 154
Conread position:	298-497
Cow position:	chr3:16333765-16333974 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	156
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	21, 163
Conread position:	298-515
Cow position:	chr3:4120398-4120183 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	160
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	21, 125
Conread position:	299-498
Cow position:	chr3:65236987-65237194 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	156
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	18, 157
Conread position:	299-524
Cow position:	chr3:18831384-18831615 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	183
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	25, 126
Conread position:	301-421
Cow position:	chr3:11292283-11292157 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	104
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	23, 120
Conread position:	301-428
Cow position:	chr3:56704356-56704222 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	107
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	20, 0
Conread position:	301-432
Cow position:	chr3:57760463-57760601 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	111
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	23, 0
Conread position:	301-435
Cow position:	chr3:2680481-2680619 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	107
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	12, 0
Conread position:	301-487
Cow position:	chr3:11987294-11987488 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	146
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	19, 150
Conread position:	301-489
Cow position:	chr3:7566452-7566259 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	154
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	23, 130
Conread position:	301-490
Cow position:	chr3:4319676-4319882 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	154
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	20, 159
Conread position:	301-493
Cow position:	chr3:6182256-6182066 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	138
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	49, 134
Conread position:	301-497
Cow position:	chr3:3698624-3698814 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	154
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	23, 79
Conread position:	301-498
Cow position:	chr3:28908238-28908045 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	150
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	22, 120
Conread position:	301-502
Cow position:	chr3:54903538-54903742 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	147
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	139, 18
Conread position:	301-505
Cow position:	chr3:39248059-39247854 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	156
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	23, 139
Conread position:	301-506
Cow position:	chr3:51234129-51233925 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	164
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	21, 118
Conread position:	301-507
Cow position:	chr3:54905583-54905786 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	161
Alignm E-value:	7e-37
Alignm gaps (pig, cow):	21, 117