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Cow genome map

           
Conread name:
           
Emb1-C0005212_G09
        

               
Conread position:
               
299-485
               

               
Cow position:
               
chr5:25597846-25598038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
301-432
               

               
Cow position:
               
chr5:35126070-35126208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
301-432
               

               
Cow position:
               
chr5:57150680-57150820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-434
               

               
Cow position:
               
chr5:3204849-3204981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
301-435
               

               
Cow position:
               
chr5:38739388-38739247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-435
               

               
Cow position:
               
chr5:60908681-60908820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
301-441
               

               
Cow position:
               
chr5:56361811-56361954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
301-483
               

               
Cow position:
               
chr5:45225798-45225613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
301-488
               

               
Cow position:
               
chr5:20779380-20779187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr5:29060912-29060725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
301-490
               

               
Cow position:
               
chr5:63234809-63234609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
301-493
               

               
Cow position:
               
chr5:30845128-30845323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
301-493
               

               
Cow position:
               
chr5:53946912-53947116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
301-496
               

               
Cow position:
               
chr5:11769286-11769492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
301-496
               

               
Cow position:
               
chr5:60948148-60948352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
301-497
               

               
Cow position:
               
chr5:25035239-25035033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:7012832-7012627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:12761103-12760898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:16214702-16214903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:53935532-53935332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:56028524-56028323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr5:57756013-57755812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
301-501
               

               
Cow position:
               
chr5:67932451-67932241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
301-502
               

               
Cow position:
               
chr5:67679194-67679407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr5:19752322-19752529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
301-506
               

               
Cow position:
               
chr5:55955923-55956140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr5:64176111-64175899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr5:4226362-4226588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr5:6444138-6443909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr5:52137039-52136819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 215
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr5:4824173-4824388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr5:43923137-43922936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr5:26262659-26262451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr5:12901938-12902157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr5:18289146-18289357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
301-515
               

               
Cow position:
               
chr5:65760515-65760295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr5:2827389-2827615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr5:42064220-42064446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 208
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr5:73167996-73167771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr5:56014746-56014969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr5:35208279-35208507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr5:41935636-41935410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr5:50101361-50101134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr5:74643660-74643439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr5:5016444-5016670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr5:33273710-33273941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr5:36650565-36650799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 213
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr5:43604156-43604386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr5:56613549-56613314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr5:54750830-54751059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
301-526
               

               
Cow position:
               
chr5:63647460-63647228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
301-526
               

               
Cow position:
               
chr5:69383270-69383500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
302-435
               

               
Cow position:
               
chr5:458505-458642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
302-522
               

               
Cow position:
               
chr5:39937132-39937360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 195
               

               
Conread position:
               
303-433
               

               
Cow position:
               
chr5:54311353-54311490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
303-458
               

               
Cow position:
               
chr5:2851612-2851769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr5:30302912-30303103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
303-505
               

               
Cow position:
               
chr5:47756793-47757001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr5:7713788-7713982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
304-423
               

               
Cow position:
               
chr5:47323481-47323606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
304-470
               

               
Cow position:
               
chr5:453581-453745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
304-507
               

               
Cow position:
               
chr5:30247498-30247295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
304-521
               

               
Cow position:
               
chr5:55965876-55965649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
304-525
               

               
Cow position:
               
chr5:1247284-1247511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
304-526
               

               
Cow position:
               
chr5:26549122-26548895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
305-434
               

               
Cow position:
               
chr5:54086560-54086693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
305-435
               

               
Cow position:
               
chr5:61875561-61875693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
305-464
               

               
Cow position:
               
chr5:71494840-71495010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-493
               

               
Cow position:
               
chr5:47696422-47696243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
305-515
               

               
Cow position:
               
chr5:34347709-34347493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
305-515
               

               
Cow position:
               
chr5:72903213-72903001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
305-516
               

               
Cow position:
               
chr5:32975534-32975320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
306-510
               

               
Cow position:
               
chr5:62995981-62996191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
306-517
               

               
Cow position:
               
chr5:3771870-3772079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
307-488
               

               
Cow position:
               
chr5:26097314-26097502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
309-493
               

               
Cow position:
               
chr5:69682320-69682130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr5:27084327-27084521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr5:44810208-44810015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
310-521
               

               
Cow position:
               
chr5:46749797-46749581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
311-509
               

               
Cow position:
               
chr5:46541021-46540828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr5:52207574-52207781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr5:59335804-59336010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
312-489
               

               
Cow position:
               
chr5:31475714-31475897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
312-490
               

               
Cow position:
               
chr5:34976808-34976625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
312-505
               

               
Cow position:
               
chr5:3677749-3677956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
312-515
               

               
Cow position:
               
chr5:46681687-46681485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr5:30561964-30562175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
313-488
               

               
Cow position:
               
chr5:29353090-29352920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
313-490
               

               
Cow position:
               
chr5:54753219-54753035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
313-491
               

               
Cow position:
               
chr5:20812579-20812764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
313-493
               

               
Cow position:
               
chr5:8159409-8159222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr5:63173014-63172826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr5:66659542-66659736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
313-502
               

               
Cow position:
               
chr5:36838993-36839173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr5:18295474-18295666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr5:29828081-29828277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
313-510
               

               
Cow position:
               
chr5:35969566-35969773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 198
               

               
Conread position:
               
313-511
               

               
Cow position:
               
chr5:2309521-2309323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 5
               

               
Conread position:
               
313-514
               

               
Cow position:
               
chr5:14550549-14550344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 5
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr5:33560705-33560501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 136
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr5:38820627-38820420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr5:49919957-49920163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
313-517
               

               
Cow position:
               
chr5:5855891-5856098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
6, 141
               

               
Conread position:
               
313-524
               

               
Cow position:
               
chr5:57399217-57399003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
315-423
               

               
Cow position:
               
chr5:4336328-4336436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr5:36822918-36823083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr5:42752939-42753110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
315-498
               

               
Cow position:
               
chr5:5808130-5808319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
315-498
               

               
Cow position:
               
chr5:54127326-54127509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
111, 137
               

               
Conread position:
               
315-506
               

               
Cow position:
               
chr5:50713721-50713520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
315-510
               

               
Cow position:
               
chr5:51012035-51012233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
315-521
               

               
Cow position:
               
chr5:43465561-43465770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 189
               

               
Conread position:
               
315-521
               

               
Cow position:
               
chr5:62341061-62341276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
316-488
               

               
Cow position:
               
chr5:29261742-29261918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
316-488
               

               
Cow position:
               
chr5:36143019-36143190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
316-490
               

               
Cow position:
               
chr5:17063044-17062865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
316-507
               

               
Cow position:
               
chr5:60207745-60207936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
317-435
               

               
Cow position:
               
chr5:34884778-34884660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
317-495
               

               
Cow position:
               
chr5:61771157-61771341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 137
               

               
Conread position:
               
317-497
               

               
Cow position:
               
chr5:37983206-37983392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
317-498
               

               
Cow position:
               
chr5:31217017-31216831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
317-498
               

               
Cow position:
               
chr5:36205728-36205912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 134
               

               
Conread position:
               
317-498
               

               
Cow position:
               
chr5:41884957-41885136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr5:35989801-35989997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
317-512
               

               
Cow position:
               
chr5:26497639-26497452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
317-512
               

               
Cow position:
               
chr5:41736220-41736415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 161
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr5:12557245-12557051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr5:40152523-40152726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 136
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr5:46710620-46710820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr5:46715520-46715720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
317-517
               

               
Cow position:
               
chr5:57526886-57526686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
317-523
               

               
Cow position:
               
chr5:57139955-57139746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 134
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr5:37090601-37090390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr5:56549404-56549614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
317-526
               

               
Cow position:
               
chr5:59395700-59395911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
318-423
               

               
Cow position:
               
chr5:29771567-29771672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-435
               

               
Cow position:
               
chr5:53710650-53710533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-475
               

               
Cow position:
               
chr5:54350322-54350172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
318-482
               

               
Cow position:
               
chr5:51125970-51125812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
318-485
               

               
Cow position:
               
chr5:35513254-35513430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr5:16893732-16893565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr5:51233980-51233811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
318-490
               

               
Cow position:
               
chr5:16668736-16668907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
318-490
               

               
Cow position:
               
chr5:59627139-59627306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr5:56860486-56860664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:22608681-22608861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:30276729-30276909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 126
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:39447496-39447303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 140
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:55756379-55756191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:71015846-71015663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
318-498
               

               
Cow position:
               
chr5:71445429-71445614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr5:7057362-7057168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr5:20128091-20128283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
104, 132
               

               
Conread position:
               
318-507
               

               
Cow position:
               
chr5:12562721-12562529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
318-507
               

               
Cow position:
               
chr5:52165138-52164942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
318-508
               

               
Cow position:
               
chr5:56060031-56059834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 190
               

               
Conread position:
               
318-510
               

               
Cow position:
               
chr5:7676116-7675924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 96
               

               
Conread position:
               
318-512
               

               
Cow position:
               
chr5:7177190-7177387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
108, 134
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:11668146-11667947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 185
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:19079291-19079482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:24915488-24915286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 135
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:47316935-47316737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
106, 133
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:57062490-57062291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:59384650-59384449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:63068684-63068484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
318-515
               

               
Cow position:
               
chr5:63831967-63832156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
188, 96
               

               
Conread position:
               
318-517
               

               
Cow position:
               
chr5:29681137-29681332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
318-520
               

               
Cow position:
               
chr5:16185417-16185622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
122, 199
               

               
Conread position:
               
318-521
               

               
Cow position:
               
chr5:47220527-47220735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
318-523
               

               
Cow position:
               
chr5:50723085-50723291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
318-524
               

               
Cow position:
               
chr5:6520050-6520253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
318-524
               

               
Cow position:
               
chr5:20843356-20843150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
318-524
               

               
Cow position:
               
chr5:52853010-52853212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr5:16937983-16937786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
318-526
               

               
Cow position:
               
chr5:29829850-29829638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
318-526
               

               
Cow position:
               
chr5:35190149-35190352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
319-491
               

               
Cow position:
               
chr5:57327839-57328012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr5:54340806-54341011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
320-489
               

               
Cow position:
               
chr5:33834081-33834253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr5:1104838-1104642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 191
               

               
Conread position:
               
321-435
               

               
Cow position:
               
chr5:3589071-3589183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
321-498
               

               
Cow position:
               
chr5:60523772-60523949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr5:52137978-52138170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
321-514
               

               
Cow position:
               
chr5:70678603-70678408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
322-463
               

               
Cow position:
               
chr5:18091047-18091187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
322-512
               

               
Cow position:
               
chr5:31648463-31648649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
322-515
               

               
Cow position:
               
chr5:17999449-17999257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
322-516
               

               
Cow position:
               
chr5:57087020-57086823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
322-525
               

               
Cow position:
               
chr5:54404811-54404617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
322-526
               

               
Cow position:
               
chr5:35247067-35246858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
115, 188
               

               
Conread position:
               
323-422
               

               
Cow position:
               
chr5:17644584-17644485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
323-430
               

               
Cow position:
               
chr5:63426961-63426852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
323-435
               

               
Cow position:
               
chr5:55129387-55129499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
323-435
               

               
Cow position:
               
chr5:57744880-57744767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
323-475
               

               
Cow position:
               
chr5:1027425-1027275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 104
               

               
Conread position:
               
323-478
               

               
Cow position:
               
chr5:57686693-57686539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
323-485
               

               
Cow position:
               
chr5:16939550-16939383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
323-486
               

               
Cow position:
               
chr5:4864587-4864745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
323-486
               

               
Cow position:
               
chr5:64523819-64523654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 100
               

               
Conread position:
               
323-486
               

               
Cow position:
               
chr5:69427409-69427251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
323-487
               

               
Cow position:
               
chr5:60016212-60016375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
323-488
               

               
Cow position:
               
chr5:6695591-6695761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr5:54312645-54312814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
323-490
               

               
Cow position:
               
chr5:7409996-7410160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
323-490
               

               
Cow position:
               
chr5:53980710-53980538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
104, 127
               

               
Conread position:
               
323-490
               

               
Cow position:
               
chr5:62572576-62572745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
323-491
               

               
Cow position:
               
chr5:30035111-30035284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
110, 127
               

               
Conread position:
               
323-491
               

               
Cow position:
               
chr5:38040520-38040353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
323-496
               

               
Cow position:
               
chr5:7139789-7139621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr5:65776341-65776156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr5:66582005-66582191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr5:3582604-3582777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr5:11540006-11539830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr5:29256663-29256486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr5:30253785-30253962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
323-501
               

               
Cow position:
               
chr5:48918853-48919023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr5:17987850-17987667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr5:56548616-56548792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
323-506
               

               
Cow position:
               
chr5:44163323-44163143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
323-507
               

               
Cow position:
               
chr5:2469163-2468982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
323-508
               

               
Cow position:
               
chr5:64140583-64140768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
323-509
               

               
Cow position:
               
chr5:66972473-66972663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:1005824-1005634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 181
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:2423243-2423056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:5010053-5009876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:19972960-19972769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 117
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:26894675-26894479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:32394643-32394835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 183
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:43371151-43370960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 130
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:44796689-44796501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr5:53055517-53055326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
118, 186
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr5:1694044-1693857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr5:34915009-34914821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr5:35459250-35459062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr5:36370323-36370507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr5:43839955-43839763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 186
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr5:51298668-51298479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr5:54875653-54875459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr5:58888-58693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
323-514
               

               
Cow position:
               
chr5:39035824-39036019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
323-514
               

               
Cow position:
               
chr5:41165132-41165319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:13270973-13270777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:36038957-36038767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:43858375-43858180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:56327677-56327488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:61049376-61049572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
114, 186
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr5:61914609-61914808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
323-517
               

               
Cow position:
               
chr5:44847977-44847788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
323-518
               

               
Cow position:
               
chr5:43402949-43403149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
323-518
               

               
Cow position:
               
chr5:44196885-44196689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
323-520
               

               
Cow position:
               
chr5:49474501-49474313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr5:6876924-6876720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
323-521
               

               
Cow position:
               
chr5:40122566-40122364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 130
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:40097640-40097842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:44446821-44446629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
323-524
               

               
Cow position:
               
chr5:49407349-49407146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:2240947-2240743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:2355564-2355765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:5760269-5760059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:17828435-17828233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:19335737-19335531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 188
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:33513682-33513489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:40889253-40889045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:52001579-52001374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 154
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:60210099-60209898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
323-525
               

               
Cow position:
               
chr5:64060490-64060693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
324-486
               

               
Cow position:
               
chr5:19294481-19294309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
324-486
               

               
Cow position:
               
chr5:30805210-30805370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
324-490
               

               
Cow position:
               
chr5:17554987-17554821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
324-497
               

               
Cow position:
               
chr5:44734680-44734506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
108, 122
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr5:34625004-34625170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr5:44722467-44722291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr5:21617503-21617683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr5:51800566-51800381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
324-525
               

               
Cow position:
               
chr5:1766254-1766049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
324-525
               

               
Cow position:
               
chr5:4280493-4280693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
325-432
               

               
Cow position:
               
chr5:54767863-54767756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-470
               

               
Cow position:
               
chr5:20667727-20667583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
325-489
               

               
Cow position:
               
chr5:30629113-30628940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
325-510
               

               
Cow position:
               
chr5:38770568-38770381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
325-510
               

               
Cow position:
               
chr5:50579120-50578930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
325-511
               

               
Cow position:
               
chr5:22186464-22186641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
325-514
               

               
Cow position:
               
chr5:52668086-52668275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr5:46499606-46499799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr5:63187831-63187638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
325-517
               

               
Cow position:
               
chr5:30221732-30221535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
325-518
               

               
Cow position:
               
chr5:30497543-30497736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
325-520
               

               
Cow position:
               
chr5:19972761-19972565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
325-524
               

               
Cow position:
               
chr5:41226960-41226757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
325-525
               

               
Cow position:
               
chr5:45854537-45854750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
326-490
               

               
Cow position:
               
chr5:58401616-58401779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
328-477
               

               
Cow position:
               
chr5:32935793-32935946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
328-489
               

               
Cow position:
               
chr5:23855620-23855464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
328-489
               

               
Cow position:
               
chr5:64843922-64843752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
328-490
               

               
Cow position:
               
chr5:47743677-47743835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
328-490
               

               
Cow position:
               
chr5:65745716-65745554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
328-498
               

               
Cow position:
               
chr5:58756357-58756182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
328-505
               

               
Cow position:
               
chr5:34787623-34787800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr5:12724343-12724160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
328-510
               

               
Cow position:
               
chr5:55162675-55162861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 181
               

               
Conread position:
               
328-510
               

               
Cow position:
               
chr5:61201808-61201995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 122
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr5:1678637-1678829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr5:65140345-65140539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
328-517
               

               
Cow position:
               
chr5:20345586-20345778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
328-521
               

               
Cow position:
               
chr5:44312366-44312169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 181
               

               
Conread position:
               
328-524
               

               
Cow position:
               
chr5:62011732-62011932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
99, 122
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr5:22957458-22957650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr5:36868786-36868987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr5:38683552-38683751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 172
               

               
Conread position:
               
328-525
               

               
Cow position:
               
chr5:58519367-58519168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 151
               

               
Conread position:
               
328-526
               

               
Cow position:
               
chr5:12299960-12300161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
329-482
               

               
Cow position:
               
chr5:6503831-6503670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
329-498
               

               
Cow position:
               
chr5:30492744-30492569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
329-521
               

               
Cow position:
               
chr5:19052742-19052547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
329-521
               

               
Cow position:
               
chr5:48154415-48154217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 124
               

               
Conread position:
               
330-498
               

               
Cow position:
               
chr5:40109544-40109706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
330-505
               

               
Cow position:
               
chr5:31234761-31234932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
330-513
               

               
Cow position:
               
chr5:46063548-46063730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
331-501
               

               
Cow position:
               
chr5:63763716-63763890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
331-515
               

               
Cow position:
               
chr5:56563807-56563987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
332-498
               

               
Cow position:
               
chr5:41530887-41530714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
333-498
               

               
Cow position:
               
chr5:57687529-57687358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
333-515
               

               
Cow position:
               
chr5:56525658-56525473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
333-521
               

               
Cow position:
               
chr5:51053595-51053405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 116
               

               
Conread position:
               
333-525
               

               
Cow position:
               
chr5:24464801-24464986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
333-526
               

               
Cow position:
               
chr5:63940007-63939806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
334-493
               

               
Cow position:
               
chr5:20288208-20288041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
334-498
               

               
Cow position:
               
chr5:69099775-69099941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
334-498
               

               
Cow position:
               
chr5:71387256-71387421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chr5:63241032-63241205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
334-505
               

               
Cow position:
               
chr5:29895226-29895399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 169
               

               
Conread position:
               
334-515
               

               
Cow position:
               
chr5:34918401-34918582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 114
               

               
Conread position:
               
334-515
               

               
Cow position:
               
chr5:47601867-47602046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
334-518
               

               
Cow position:
               
chr5:22667126-22667312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 116
               

               
Conread position:
               
334-520
               

               
Cow position:
               
chr5:37253484-37253664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
334-521
               

               
Cow position:
               
chr5:12434598-12434780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
334-521
               

               
Cow position:
               
chr5:29599491-29599308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
170, 90
               

               
Conread position:
               
334-524
               

               
Cow position:
               
chr5:60100525-60100710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
334-524
               

               
Cow position:
               
chr5:60153830-60154015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
335-498
               

               
Cow position:
               
chr5:19561392-19561224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
335-525
               

               
Cow position:
               
chr5:60212641-60212836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
336-515
               

               
Cow position:
               
chr5:56284360-56284544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 146
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr5:34562074-34562251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr5:57497366-57497185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
337-435
               

               
Cow position:
               
chr5:54154144-54154047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
337-524
               

               
Cow position:
               
chr5:35235631-35235440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
337-526
               

               
Cow position:
               
chr5:59511414-59511233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
338-498
               

               
Cow position:
               
chr5:17104909-17105067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
340-505
               

               
Cow position:
               
chr5:12504729-12504565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
340-514
               

               
Cow position:
               
chr5:53779216-53779395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
340-521
               

               
Cow position:
               
chr5:15770394-15770209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
340-521
               

               
Cow position:
               
chr5:48819334-48819522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
340-524
               

               
Cow position:
               
chr5:29097429-29097606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
340-526
               

               
Cow position:
               
chr5:59662997-59662809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
343-510
               

               
Cow position:
               
chr5:5030507-5030673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
343-512
               

               
Cow position:
               
chr5:4981514-4981681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
343-517
               

               
Cow position:
               
chr5:8136535-8136699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
343-521
               

               
Cow position:
               
chr5:26149098-26149280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
344-497
               

               
Cow position:
               
chr5:54713000-54712847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
344-498
               

               
Cow position:
               
chr5:718215-718371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
344-498
               

               
Cow position:
               
chr5:40292874-40292718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 106
               

               
Conread position:
               
344-498
               

               
Cow position:
               
chr5:47888666-47888508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
344-498
               

               
Cow position:
               
chr5:55949614-55949456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
344-498
               

               
Cow position:
               
chr5:57447601-57447442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
344-511
               

               
Cow position:
               
chr5:55943651-55943481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 102
               

               
Conread position:
               
344-512
               

               
Cow position:
               
chr5:12668919-12668755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
344-516
               

               
Cow position:
               
chr5:55749972-55749798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
344-525
               

               
Cow position:
               
chr5:56643132-56643319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
344-526
               

               
Cow position:
               
chr5:25446950-25447137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
345-505
               

               
Cow position:
               
chr5:53825048-53824884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
345-524
               

               
Cow position:
               
chr5:62811890-62812074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
347-510
               

               
Cow position:
               
chr5:55783895-55783727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
348-515
               

               
Cow position:
               
chr5:24108991-24108818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
349-505
               

               
Cow position:
               
chr5:69765964-69765806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
350-515
               

               
Cow position:
               
chr5:12340045-12339885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
350-517
               

               
Cow position:
               
chr5:9487014-9486843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 103
               

               
Conread position:
               
351-488
               

               
Cow position:
               
chr5:37646153-37646287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
351-496
               

               
Cow position:
               
chr5:54555118-54554965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
352-490
               

               
Cow position:
               
chr5:19626651-19626790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
352-505
               

               
Cow position:
               
chr5:64061092-64061241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
352-518
               

               
Cow position:
               
chr5:59958247-59958413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
352-525
               

               
Cow position:
               
chr5:12566470-12566294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
352-526
               

               
Cow position:
               
chr5:25450027-25450194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
353-523
               

               
Cow position:
               
chr5:58487449-58487617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
355-525
               

               
Cow position:
               
chr5:61593343-61593511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
356-520
               

               
Cow position:
               
chr5:57231711-57231874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
356-521
               

               
Cow position:
               
chr5:56624440-56624269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
358-514
               

               
Cow position:
               
chr5:57584955-57585114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
358-524
               

               
Cow position:
               
chr5:4728153-4728315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
358-525
               

               
Cow position:
               
chr5:43815738-43815571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
359-490
               

               
Cow position:
               
chr5:28660310-28660445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
359-507
               

               
Cow position:
               
chr5:14419930-14419786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
360-524
               

               
Cow position:
               
chr5:1178035-1178202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
67, 89
               

               
Conread position:
               
362-502
               

               
Cow position:
               
chr5:22898226-22898093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
363-521
               

               
Cow position:
               
chr5:44868441-44868600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
365-521
               

               
Cow position:
               
chr5:75712052-75711893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
369-515
               

               
Cow position:
               
chr5:34193229-34193378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
370-516
               

               
Cow position:
               
chr5:22210981-22210835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 74
               

               
Conread position:
               
374-507
               

               
Cow position:
               
chr5:70146751-70146618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
378-521
               

               
Cow position:
               
chr5:43434905-43434756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
383-510
               

               
Cow position:
               
chr5:40740225-40740093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
384-525
               

               
Cow position:
               
chr5:56428469-56428328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
389-525
               

               
Cow position:
               
chr5:45337311-45337170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
390-510
               

               
Cow position:
               
chr5:21375003-21374883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
394-523
               

               
Cow position:
               
chr5:17254109-17253983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.