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Cow genome map

           
Conread name:
           
Emb1-C0005215_B10
        

               
Conread position:
               
74-588
               

               
Cow position:
               
chr16:28191732-28192254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
76-598
               

               
Cow position:
               
chr16:25170057-25170603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr16:30715157-30715443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 272
               

               
Conread position:
               
77-375
               

               
Cow position:
               
chr16:39514419-39514114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
77-376
               

               
Cow position:
               
chr16:26610307-26610603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 77
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr16:49141893-49141599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 163
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr16:16402663-16402350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr16:40561891-40562201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
77-383
               

               
Cow position:
               
chr16:56231488-56231796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 286
               

               
Conread position:
               
77-384
               

               
Cow position:
               
chr16:39385066-39385379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 308
               

               
Conread position:
               
77-384
               

               
Cow position:
               
chr16:48341024-48340726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
77-385
               

               
Cow position:
               
chr16:48370281-48369977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
77-386
               

               
Cow position:
               
chr16:31122589-31122282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 257
               

               
Conread position:
               
77-393
               

               
Cow position:
               
chr16:47098324-47098025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
259, 31
               

               
Conread position:
               
77-398
               

               
Cow position:
               
chr16:4059032-4059338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr16:32132199-32132613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr16:4626729-4626273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 271
               

               
Conread position:
               
77-510
               

               
Cow position:
               
chr16:39616410-39616846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
77-525
               

               
Cow position:
               
chr16:11790666-11791151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
77-526
               

               
Cow position:
               
chr16:7498734-7499190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 174
               

               
Conread position:
               
77-555
               

               
Cow position:
               
chr16:33226866-33226372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
77-578
               

               
Cow position:
               
chr16:38709154-38708644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
77-582
               

               
Cow position:
               
chr16:48096097-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
77-583
               

               
Cow position:
               
chr16:5293324-5293810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 186
               

               
Conread position:
               
77-584
               

               
Cow position:
               
chr16:54578837-54579363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
77-589
               

               
Cow position:
               
chr16:42092708-42092175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
77-591
               

               
Cow position:
               
chr16:4857428-4856893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
77-593
               

               
Cow position:
               
chr16:32970403-32969876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 150
               

               
Conread position:
               
77-593
               

               
Cow position:
               
chr16:51500598-51501136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
77-599
               

               
Cow position:
               
chr16:51598937-51598400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 176
               

               
Conread position:
               
77-600
               

               
Cow position:
               
chr16:15824773-15824228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 95
               

               
Conread position:
               
77-601
               

               
Cow position:
               
chr16:37670077-37669500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
77-602
               

               
Cow position:
               
chr16:33704471-33705017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
77-604
               

               
Cow position:
               
chr16:45139333-45139879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
77-607
               

               
Cow position:
               
chr16:42079173-42078625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 22
               

               
Conread position:
               
77-607
               

               
Cow position:
               
chr16:49126518-49125968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 171
               

               
Conread position:
               
77-615
               

               
Cow position:
               
chr16:39474473-39473929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 159
               

               
Conread position:
               
77-616
               

               
Cow position:
               
chr16:40333656-40333108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 96
               

               
Conread position:
               
78-339
               

               
Cow position:
               
chr16:15726695-15726442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 141
               

               
Conread position:
               
78-370
               

               
Cow position:
               
chr16:49125854-49125570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr16:11568443-11568153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr16:26500830-26501124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr16:19643561-19643854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr16:3633782-3634081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr16:13791171-13791486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr16:24825733-24826042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 193
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr16:16424938-16424631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 192
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr16:14028951-14028654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr16:14754666-14754349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 188
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr16:38664042-38663735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr16:24147824-24148136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr16:42970265-42969945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 183
               

               
Conread position:
               
78-394
               

               
Cow position:
               
chr16:43275688-43276004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 176
               

               
Conread position:
               
78-574
               

               
Cow position:
               
chr16:33645686-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
78-585
               

               
Cow position:
               
chr16:13989652-13990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 112
               

               
Conread position:
               
78-586
               

               
Cow position:
               
chr16:23563808-23564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
78-590
               

               
Cow position:
               
chr16:41752916-41752377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 177
               

               
Conread position:
               
78-593
               

               
Cow position:
               
chr16:52169745-52170261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 50
               

               
Conread position:
               
78-598
               

               
Cow position:
               
chr16:35757883-35758412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
78-601
               

               
Cow position:
               
chr16:52835207-52834686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
78-604
               

               
Cow position:
               
chr16:11775381-11774834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
78-607
               

               
Cow position:
               
chr16:18205627-18206184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 192
               

               
Conread position:
               
78-607
               

               
Cow position:
               
chr16:55682959-55683519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
78-611
               

               
Cow position:
               
chr16:51578746-51578223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
78-659
               

               
Cow position:
               
chr16:46552473-46553069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
78-677
               

               
Cow position:
               
chr16:6379443-6378838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
79-376
               

               
Cow position:
               
chr16:2223737-2223437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
79-416
               

               
Cow position:
               
chr16:16543724-16544080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
79-493
               

               
Cow position:
               
chr16:50418022-50417588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 234
               

               
Conread position:
               
80-596
               

               
Cow position:
               
chr16:48398575-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr16:33507735-33508257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
80-607
               

               
Cow position:
               
chr16:13307197-13306651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
80-607
               

               
Cow position:
               
chr16:56626650-56627152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
83-598
               

               
Cow position:
               
chr16:17142607-17143151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
85-385
               

               
Cow position:
               
chr16:15808645-15808948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
86-522
               

               
Cow position:
               
chr16:47510300-47509859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
88-362
               

               
Cow position:
               
chr16:590227-589966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
88-385
               

               
Cow position:
               
chr16:11105227-11105526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
105-385
               

               
Cow position:
               
chr16:819948-820222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
105-608
               

               
Cow position:
               
chr16:19003824-19003293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
108-598
               

               
Cow position:
               
chr16:53627724-53627242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
109-377
               

               
Cow position:
               
chr16:48494856-48494590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
110-559
               

               
Cow position:
               
chr16:27701547-27701093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 169
               

               
Conread position:
               
119-508
               

               
Cow position:
               
chr16:43506094-43505688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
126-602
               

               
Cow position:
               
chr16:47820285-47820788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
128-598
               

               
Cow position:
               
chr16:13689379-13689875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr16:20634152-20633905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
131-455
               

               
Cow position:
               
chr16:8280070-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
131-582
               

               
Cow position:
               
chr16:14106365-14106840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr16:35937057-35937304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr16:11643083-11643363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
139-591
               

               
Cow position:
               
chr16:29608245-29608727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
143-376
               

               
Cow position:
               
chr16:14758470-14758698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
143-377
               

               
Cow position:
               
chr16:5363620-5363861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr16:5636320-5636557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
143-384
               

               
Cow position:
               
chr16:52889679-52889437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
144-343
               

               
Cow position:
               
chr16:53892048-53891850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr16:11619486-11619721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr16:24672627-24672382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
144-487
               

               
Cow position:
               
chr16:571185-570818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 277
               

               
Conread position:
               
145-395
               

               
Cow position:
               
chr16:37116807-37117058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
145-522
               

               
Cow position:
               
chr16:53086591-53086202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
145-587
               

               
Cow position:
               
chr16:7075652-7076121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
145-591
               

               
Cow position:
               
chr16:23681105-23681566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
145-608
               

               
Cow position:
               
chr16:25484099-25484545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr16:902152-901945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr16:25287955-25287716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
147-593
               

               
Cow position:
               
chr16:2750730-2751181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
147-603
               

               
Cow position:
               
chr16:23033604-23034046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
148-381
               

               
Cow position:
               
chr16:39417373-39417147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
148-606
               

               
Cow position:
               
chr16:24143197-24142734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
148-607
               

               
Cow position:
               
chr16:50282695-50282215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
150-488
               

               
Cow position:
               
chr16:4699231-4698885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
150-608
               

               
Cow position:
               
chr16:45813954-45813477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
151-381
               

               
Cow position:
               
chr16:35623511-35623273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 207
               

               
Conread position:
               
152-603
               

               
Cow position:
               
chr16:20025184-20025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
153-602
               

               
Cow position:
               
chr16:14242116-14242586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
153-604
               

               
Cow position:
               
chr16:16597303-16597777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
154-376
               

               
Cow position:
               
chr16:47245330-47245552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
154-642
               

               
Cow position:
               
chr16:42777705-42778199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
156-582
               

               
Cow position:
               
chr16:50873430-50872993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 335
               

               
Conread position:
               
156-602
               

               
Cow position:
               
chr16:26649889-26649420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 227
               

               
Conread position:
               
157-463
               

               
Cow position:
               
chr16:13752378-13752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
157-521
               

               
Cow position:
               
chr16:19408768-19408391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
157-556
               

               
Cow position:
               
chr16:11615483-11615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
158-600
               

               
Cow position:
               
chr16:9985636-9985189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
159-591
               

               
Cow position:
               
chr16:935699-935252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
161-602
               

               
Cow position:
               
chr16:30909182-30908736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 232
               

               
Conread position:
               
161-609
               

               
Cow position:
               
chr16:38905477-38905003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
165-380
               

               
Cow position:
               
chr16:11806435-11806637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
165-601
               

               
Cow position:
               
chr16:11422065-11422529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
169-381
               

               
Cow position:
               
chr16:47336487-47336701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr16:4134625-4134857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
172-382
               

               
Cow position:
               
chr16:53595757-53595550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
173-382
               

               
Cow position:
               
chr16:45534946-45535149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
174-595
               

               
Cow position:
               
chr16:25839380-25839822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
174-609
               

               
Cow position:
               
chr16:56082596-56082139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 78
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr16:5896184-5896392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
159, 77
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr16:23810688-23810881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
160, 55
               

               
Conread position:
               
176-381
               

               
Cow position:
               
chr16:36203849-36203655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
176-391
               

               
Cow position:
               
chr16:4875764-4875973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
176-430
               

               
Cow position:
               
chr16:47620146-47620398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
160, 92
               

               
Conread position:
               
176-510
               

               
Cow position:
               
chr16:8812321-8811970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
176-512
               

               
Cow position:
               
chr16:33235370-33235036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 167
               

               
Conread position:
               
176-569
               

               
Cow position:
               
chr16:4192654-4192248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr16:35168492-35168814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 193
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr16:10148048-10148472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
178-586
               

               
Cow position:
               
chr16:31117850-31117419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
179-602
               

               
Cow position:
               
chr16:32302218-32301786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
181-571
               

               
Cow position:
               
chr16:32781133-32781557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
182-602
               

               
Cow position:
               
chr16:50288929-50289373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 162
               

               
Conread position:
               
185-552
               

               
Cow position:
               
chr16:21904937-21905310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
209, 228
               

               
Conread position:
               
186-639
               

               
Cow position:
               
chr16:8323210-8322741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
150, 231
               

               
Conread position:
               
190-523
               

               
Cow position:
               
chr16:48191221-48190876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 62
               

               
Conread position:
               
191-381
               

               
Cow position:
               
chr16:47643200-47643382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
191-591
               

               
Cow position:
               
chr16:42443935-42444365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 8
               

               
Conread position:
               
192-541
               

               
Cow position:
               
chr16:54679449-54679815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
193-574
               

               
Cow position:
               
chr16:45677069-45676686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
198-454
               

               
Cow position:
               
chr16:22860971-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
198-522
               

               
Cow position:
               
chr16:12060201-12060558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 350
               

               
Conread position:
               
200-585
               

               
Cow position:
               
chr16:12085991-12085610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
142, 216
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr16:3047550-3047379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr16:4275950-4275779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
206-602
               

               
Cow position:
               
chr16:8069022-8068600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr16:49404356-49404188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
209-591
               

               
Cow position:
               
chr16:45677774-45678183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
211-597
               

               
Cow position:
               
chr16:14685588-14685180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
215-394
               

               
Cow position:
               
chr16:54083839-54084018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
216-598
               

               
Cow position:
               
chr16:45554244-45554647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
219-392
               

               
Cow position:
               
chr16:10352676-10352852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
219-493
               

               
Cow position:
               
chr16:41697282-41696984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
219-495
               

               
Cow position:
               
chr16:54598069-54598327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
220-591
               

               
Cow position:
               
chr16:41530481-41530103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
221-380
               

               
Cow position:
               
chr16:24855351-24855510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
221-490
               

               
Cow position:
               
chr16:42345795-42345508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
221-614
               

               
Cow position:
               
chr16:44584619-44584216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
223-380
               

               
Cow position:
               
chr16:17288754-17288915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
228-523
               

               
Cow position:
               
chr16:17282485-17282798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
236-547
               

               
Cow position:
               
chr16:52133693-52133356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 323
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr16:31348943-31348797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
244-377
               

               
Cow position:
               
chr16:20069658-20069797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
244-598
               

               
Cow position:
               
chr16:34153744-34153357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 280
               

               
Conread position:
               
244-606
               

               
Cow position:
               
chr16:7418214-7418592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 245
               

               
Conread position:
               
244-613
               

               
Cow position:
               
chr16:10592265-10592660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 350
               

               
Conread position:
               
245-376
               

               
Cow position:
               
chr16:38191303-38191437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
245-455
               

               
Cow position:
               
chr16:9136007-9136238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
246-383
               

               
Cow position:
               
chr16:33357844-33357707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
248-592
               

               
Cow position:
               
chr16:14974698-14974362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
251-385
               

               
Cow position:
               
chr16:25386818-25386949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
251-438
               

               
Cow position:
               
chr16:53037786-53037583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
252-368
               

               
Cow position:
               
chr16:23761963-23762082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
252-574
               

               
Cow position:
               
chr16:17736105-17736416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
254-381
               

               
Cow position:
               
chr16:17945362-17945489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
256-582
               

               
Cow position:
               
chr16:8240023-8239668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 220
               

               
Conread position:
               
257-381
               

               
Cow position:
               
chr16:33198591-33198469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
257-600
               

               
Cow position:
               
chr16:12320065-12320437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 268
               

               
Conread position:
               
259-571
               

               
Cow position:
               
chr16:10504681-10504999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
259-602
               

               
Cow position:
               
chr16:48613605-48613260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
262-597
               

               
Cow position:
               
chr16:9904941-9905307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
276-559
               

               
Cow position:
               
chr16:41578088-41578396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 250
               

               
Conread position:
               
285-615
               

               
Cow position:
               
chr16:8737936-8738296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 238
               

               
Conread position:
               
293-596
               

               
Cow position:
               
chr16:55233574-55233888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 217
               

               
Conread position:
               
296-585
               

               
Cow position:
               
chr16:34754078-34753754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr16:45121929-45122244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
306-615
               

               
Cow position:
               
chr16:7136437-7136115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 196
               

               
Conread position:
               
311-614
               

               
Cow position:
               
chr16:11660549-11660241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
321-601
               

               
Cow position:
               
chr16:31149300-31149590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
328-591
               

               
Cow position:
               
chr16:56358353-56358079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
328-611
               

               
Cow position:
               
chr16:33134856-33135151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
354-587
               

               
Cow position:
               
chr16:15945304-15945051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
370-502
               

               
Cow position:
               
chr16:32807315-32807176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
370-515
               

               
Cow position:
               
chr16:34220162-34220317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
370-600
               

               
Cow position:
               
chr16:8462100-8461869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
370-612
               

               
Cow position:
               
chr16:18243718-18243964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
371-578
               

               
Cow position:
               
chr16:31561731-31561946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
371-598
               

               
Cow position:
               
chr16:33198459-33198221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
373-603
               

               
Cow position:
               
chr16:30036213-30036453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
380-514
               

               
Cow position:
               
chr16:12133847-12133986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
380-526
               

               
Cow position:
               
chr16:3114526-3114681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
380-575
               

               
Cow position:
               
chr16:12010082-12010287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
380-585
               

               
Cow position:
               
chr16:21370200-21369991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 182
               

               
Conread position:
               
380-586
               

               
Cow position:
               
chr16:9553046-9553249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
380-589
               

               
Cow position:
               
chr16:24855530-24855737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
380-591
               

               
Cow position:
               
chr16:42977452-42977679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
380-596
               

               
Cow position:
               
chr16:53792833-53792605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 198
               

               
Conread position:
               
380-599
               

               
Cow position:
               
chr16:7723688-7723912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
380-604
               

               
Cow position:
               
chr16:19052622-19052848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
380-605
               

               
Cow position:
               
chr16:31880775-31880536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
380-609
               

               
Cow position:
               
chr16:56243898-56243660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
380-611
               

               
Cow position:
               
chr16:31079104-31078878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
380-620
               

               
Cow position:
               
chr16:46433340-46433087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
380-621
               

               
Cow position:
               
chr16:46743021-46743260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
380-623
               

               
Cow position:
               
chr16:22984743-22984983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
381-526
               

               
Cow position:
               
chr16:17945509-17945659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
381-597
               

               
Cow position:
               
chr16:11957590-11957368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
381-602
               

               
Cow position:
               
chr16:14376770-14376997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
388-530
               

               
Cow position:
               
chr16:17292027-17291881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
388-571
               

               
Cow position:
               
chr16:25386972-25387154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
388-574
               

               
Cow position:
               
chr16:34205069-34204877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
388-586
               

               
Cow position:
               
chr16:31484667-31484466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
388-608
               

               
Cow position:
               
chr16:24202870-24202638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
388-613
               

               
Cow position:
               
chr16:11134986-11134761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
389-601
               

               
Cow position:
               
chr16:30305816-30305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
389-607
               

               
Cow position:
               
chr16:11584409-11584187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
391-591
               

               
Cow position:
               
chr16:49174289-49174501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
392-578
               

               
Cow position:
               
chr16:16025435-16025636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
392-591
               

               
Cow position:
               
chr16:17135726-17135939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
392-614
               

               
Cow position:
               
chr16:29026207-29026444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
392-617
               

               
Cow position:
               
chr16:29037918-29038149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
393-601
               

               
Cow position:
               
chr16:15415729-15415512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 211
               

               
Conread position:
               
394-603
               

               
Cow position:
               
chr16:33290392-33290602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
396-603
               

               
Cow position:
               
chr16:53451708-53451922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
397-611
               

               
Cow position:
               
chr16:19402751-19402541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
398-604
               

               
Cow position:
               
chr16:15252040-15251842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
398-613
               

               
Cow position:
               
chr16:26069761-26069968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
405-598
               

               
Cow position:
               
chr16:8953664-8953461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
405-604
               

               
Cow position:
               
chr16:23187562-23187766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
405-608
               

               
Cow position:
               
chr16:8522370-8522169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
406-607
               

               
Cow position:
               
chr16:34998606-34998402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
407-574
               

               
Cow position:
               
chr16:15023610-15023446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
407-574
               

               
Cow position:
               
chr16:39385512-39385677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
407-586
               

               
Cow position:
               
chr16:9987047-9986856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
407-586
               

               
Cow position:
               
chr16:32142111-32142292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
407-586
               

               
Cow position:
               
chr16:43758625-43758446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
407-588
               

               
Cow position:
               
chr16:49229747-49229572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
407-589
               

               
Cow position:
               
chr16:42539567-42539375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr16:7152150-7151969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr16:9615196-9615010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr16:15714130-15714317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
407-593
               

               
Cow position:
               
chr16:52275108-52274928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
407-596
               

               
Cow position:
               
chr16:53508963-53508782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
407-597
               

               
Cow position:
               
chr16:10249798-10249604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
407-598
               

               
Cow position:
               
chr16:12091642-12091440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
407-598
               

               
Cow position:
               
chr16:13996175-13995984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
407-598
               

               
Cow position:
               
chr16:47274707-47274512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
407-598
               

               
Cow position:
               
chr16:56615482-56615290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
407-601
               

               
Cow position:
               
chr16:9097044-9097242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
407-601
               

               
Cow position:
               
chr16:50286533-50286728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
407-602
               

               
Cow position:
               
chr16:21442590-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
407-603
               

               
Cow position:
               
chr16:18048134-18047935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
407-603
               

               
Cow position:
               
chr16:56670898-56670692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
407-605
               

               
Cow position:
               
chr16:45193788-45193587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr16:7583418-7583617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr16:19478744-19478546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr16:43308540-43308346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
407-608
               

               
Cow position:
               
chr16:44394301-44394510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
407-609
               

               
Cow position:
               
chr16:17180180-17180382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
407-611
               

               
Cow position:
               
chr16:11083019-11083221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
407-615
               

               
Cow position:
               
chr16:7928364-7928156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
407-650
               

               
Cow position:
               
chr16:11390264-11390011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 211
               

               
Conread position:
               
408-608
               

               
Cow position:
               
chr16:41095752-41095952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
409-577
               

               
Cow position:
               
chr16:7812713-7812884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
410-598
               

               
Cow position:
               
chr16:30662250-30662060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
410-606
               

               
Cow position:
               
chr16:10011828-10011630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
410-607
               

               
Cow position:
               
chr16:20253185-20252996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
182, 73
               

               
Conread position:
               
410-607
               

               
Cow position:
               
chr16:23722018-23721829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
410-608
               

               
Cow position:
               
chr16:16163681-16163491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
410-613
               

               
Cow position:
               
chr16:6266319-6266124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
411-602
               

               
Cow position:
               
chr16:7912156-7912341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
413-577
               

               
Cow position:
               
chr16:31348736-31348571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
414-571
               

               
Cow position:
               
chr16:29060405-29060569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
414-578
               

               
Cow position:
               
chr16:15905222-15905052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
414-582
               

               
Cow position:
               
chr16:9958857-9959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
414-582
               

               
Cow position:
               
chr16:51143827-51143995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
414-584
               

               
Cow position:
               
chr16:12077459-12077283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
414-586
               

               
Cow position:
               
chr16:12324483-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
414-587
               

               
Cow position:
               
chr16:23955804-23955630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
414-587
               

               
Cow position:
               
chr16:24672835-24672659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
414-591
               

               
Cow position:
               
chr16:28444462-28444282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
414-592
               

               
Cow position:
               
chr16:13791631-13791813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
414-594
               

               
Cow position:
               
chr16:28233277-28233097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
414-598
               

               
Cow position:
               
chr16:3049126-3048939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-598
               

               
Cow position:
               
chr16:4277526-4277339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-598
               

               
Cow position:
               
chr16:18353930-18353741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
414-598
               

               
Cow position:
               
chr16:52325571-52325384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-601
               

               
Cow position:
               
chr16:820278-820466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
414-601
               

               
Cow position:
               
chr16:889341-889162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
414-601
               

               
Cow position:
               
chr16:6026970-6026784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
414-601
               

               
Cow position:
               
chr16:18429615-18429803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
414-603
               

               
Cow position:
               
chr16:19643916-19644102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
6, 73
               

               
Conread position:
               
414-604
               

               
Cow position:
               
chr16:5382209-5382405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
414-604
               

               
Cow position:
               
chr16:15407530-15407338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
414-605
               

               
Cow position:
               
chr16:4615085-4615277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
414-605
               

               
Cow position:
               
chr16:8810066-8809879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr16:2223369-2223173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr16:19053855-19053670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr16:50442576-50442773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
414-610
               

               
Cow position:
               
chr16:11003537-11003338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
414-611
               

               
Cow position:
               
chr16:6343881-6343683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
414-612
               

               
Cow position:
               
chr16:49860265-49860462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
414-614
               

               
Cow position:
               
chr16:56912660-56912462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
414-617
               

               
Cow position:
               
chr16:14343607-14343813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-620
               

               
Cow position:
               
chr16:42733983-42733787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
414-651
               

               
Cow position:
               
chr16:8065860-8065624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
414-659
               

               
Cow position:
               
chr16:19282033-19282277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
414-668
               

               
Cow position:
               
chr16:30174503-30174241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
415-581
               

               
Cow position:
               
chr16:30897970-30897806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
415-588
               

               
Cow position:
               
chr16:49734116-49733943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
415-589
               

               
Cow position:
               
chr16:5243115-5243289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
415-591
               

               
Cow position:
               
chr16:9730177-9730000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
415-594
               

               
Cow position:
               
chr16:4059385-4059569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
415-601
               

               
Cow position:
               
chr16:8959027-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
415-601
               

               
Cow position:
               
chr16:17745865-17746058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
415-603
               

               
Cow position:
               
chr16:14841388-14841581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
415-605
               

               
Cow position:
               
chr16:30646541-30646727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
415-606
               

               
Cow position:
               
chr16:24674649-24674453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
415-607
               

               
Cow position:
               
chr16:15203340-15203133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
415-607
               

               
Cow position:
               
chr16:38663681-38663489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
415-608
               

               
Cow position:
               
chr16:27327097-27326900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
415-614
               

               
Cow position:
               
chr16:31701634-31701826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 39
               

               
Conread position:
               
416-584
               

               
Cow position:
               
chr16:3047309-3047144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
416-584
               

               
Cow position:
               
chr16:4275709-4275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
416-588
               

               
Cow position:
               
chr16:48956828-48957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
416-592
               

               
Cow position:
               
chr16:12220711-12220891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
416-594
               

               
Cow position:
               
chr16:1582896-1582721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
416-598
               

               
Cow position:
               
chr16:20824507-20824689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
416-598
               

               
Cow position:
               
chr16:56595360-56595176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
416-599
               

               
Cow position:
               
chr16:25419224-25419037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
416-607
               

               
Cow position:
               
chr16:4616653-4616465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
416-618
               

               
Cow position:
               
chr16:34506381-34506577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
416-619
               

               
Cow position:
               
chr16:17135030-17134827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
417-584
               

               
Cow position:
               
chr16:7442070-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
417-586
               

               
Cow position:
               
chr16:41696039-41696206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
417-617
               

               
Cow position:
               
chr16:27728291-27728482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
418-593
               

               
Cow position:
               
chr16:8206052-8205875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
418-603
               

               
Cow position:
               
chr16:238300-238482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
418-603
               

               
Cow position:
               
chr16:31011359-31011547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
419-596
               

               
Cow position:
               
chr16:20614531-20614706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
419-608
               

               
Cow position:
               
chr16:11053793-11053975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
421-608
               

               
Cow position:
               
chr16:31626247-31626069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
171, 11
               

               
Conread position:
               
422-591
               

               
Cow position:
               
chr16:23515730-23515561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
422-598
               

               
Cow position:
               
chr16:12111930-12111757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
422-606
               

               
Cow position:
               
chr16:20921183-20921370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
422-606
               

               
Cow position:
               
chr16:44428920-44429098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
169, 85
               

               
Conread position:
               
423-585
               

               
Cow position:
               
chr16:45046876-45047047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
423-604
               

               
Cow position:
               
chr16:5396780-5396598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
423-604
               

               
Cow position:
               
chr16:46548232-46548044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
423-614
               

               
Cow position:
               
chr16:42107666-42107858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
423-615
               

               
Cow position:
               
chr16:22776385-22776191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
424-586
               

               
Cow position:
               
chr16:48130357-48130196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
424-603
               

               
Cow position:
               
chr16:7665675-7665858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
426-577
               

               
Cow position:
               
chr16:47662769-47662917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
426-596
               

               
Cow position:
               
chr16:19496978-19496810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
426-607
               

               
Cow position:
               
chr16:45943725-45943544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 127
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr16:3938968-3938815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr16:21974921-21974742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
428-607
               

               
Cow position:
               
chr16:13906403-13906231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
428-618
               

               
Cow position:
               
chr16:51393348-51393158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
430-583
               

               
Cow position:
               
chr16:46184202-46184358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
430-585
               

               
Cow position:
               
chr16:11019470-11019314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
430-588
               

               
Cow position:
               
chr16:32426679-32426523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
430-588
               

               
Cow position:
               
chr16:35477091-35476939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
430-592
               

               
Cow position:
               
chr16:40446306-40446474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
430-592
               

               
Cow position:
               
chr16:50569308-50569466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
430-598
               

               
Cow position:
               
chr16:29311568-29311740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
430-602
               

               
Cow position:
               
chr16:21044341-21044517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
430-603
               

               
Cow position:
               
chr16:17617318-17617144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
430-607
               

               
Cow position:
               
chr16:9830490-9830666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
430-607
               

               
Cow position:
               
chr16:38581047-38581226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
430-615
               

               
Cow position:
               
chr16:16542894-16543080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
431-594
               

               
Cow position:
               
chr16:44138447-44138283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
431-602
               

               
Cow position:
               
chr16:12507216-12507041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
431-608
               

               
Cow position:
               
chr16:10032908-10033088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
432-602
               

               
Cow position:
               
chr16:30055055-30054884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
432-614
               

               
Cow position:
               
chr16:21002328-21002144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
433-569
               

               
Cow position:
               
chr16:33458628-33458762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
433-601
               

               
Cow position:
               
chr16:28001185-28001009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
433-602
               

               
Cow position:
               
chr16:8795671-8795492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
433-610
               

               
Cow position:
               
chr16:23881163-23880989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
438-606
               

               
Cow position:
               
chr16:12102587-12102753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
440-575
               

               
Cow position:
               
chr16:41653028-41653161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
440-604
               

               
Cow position:
               
chr16:8193509-8193674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
442-617
               

               
Cow position:
               
chr16:7727986-7727810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
444-599
               

               
Cow position:
               
chr16:26809429-26809586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
445-608
               

               
Cow position:
               
chr16:51216986-51216822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
457-598
               

               
Cow position:
               
chr16:12101321-12101458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
484-614
               

               
Cow position:
               
chr16:30596401-30596266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
496-613
               

               
Cow position:
               
chr16:20070252-20070364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.