Cow genome map

Conread name: Emb1-C0005215_B10

Conread position: 67-384
Cow position: chr3:61361047-61361355 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 66

Conread position: 72-381
Cow position: chr3:209960-210262 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 11

Conread position: 74-598
Cow position: chr3:16752608-16752066 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 107

Conread position: 74-607
Cow position: chr3:9663548-9662974 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 462

Conread position: 77-351
Cow position: chr3:53384641-53384368 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 167

Conread position: 77-352
Cow position: chr3:8557139-8556868 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 157

Conread position: 77-365
Cow position: chr3:58383604-58383896 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 175

Conread position: 77-374
Cow position: chr3:61191275-61190987 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 166

Conread position: 77-382
Cow position: chr3:35283443-35283145 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 61

Conread position: 77-385
Cow position: chr3:77496460-77496776 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 51

Conread position: 77-395
Cow position: chr3:31500997-31501311 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 43

Conread position: 77-483
Cow position: chr3:75710955-75711379 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 77-502
Cow position: chr3:26219419-26218961 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 113

Conread position: 77-502
Cow position: chr3:62826971-62826527 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 77-549
Cow position: chr3:70566096-70565599 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 172

Conread position: 77-584
Cow position: chr3:10958583-10958071 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 55

Conread position: 77-594
Cow position: chr3:48362725-48363253 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 134

Conread position: 77-595
Cow position: chr3:13353002-13353548 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 104

Conread position: 77-597
Cow position: chr3:15057968-15057456 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 181

Conread position: 77-597
Cow position: chr3:75479660-75480185 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 77-598
Cow position: chr3:7338135-7337599 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 49

Conread position: 77-603
Cow position: chr3:21302789-21302248 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 162

Conread position: 77-603
Cow position: chr3:50768317-50768871 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 448

Conread position: 77-607
Cow position: chr3:55190103-55189553 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 77-607
Cow position: chr3:74233852-74234379 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 67

Conread position: 77-645
Cow position: chr3:23169428-23168827 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 267

Conread position: 78-328
Cow position: chr3:22908188-22907940 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 78-331
Cow position: chr3:16656823-16656583 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 78-331
Cow position: chr3:58158809-58158569 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 78-355
Cow position: chr3:36657127-36656851 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 178

Conread position: 78-360
Cow position: chr3:48530281-48530570 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 108, 82

Conread position: 78-364
Cow position: chr3:53903832-53904108 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 78-374
Cow position: chr3:28908560-28908265 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 163

Conread position: 78-376
Cow position: chr3:72675731-72676033 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 21

Conread position: 78-377
Cow position: chr3:25690436-25690733 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 78-377
Cow position: chr3:26894314-26894604 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 61

Conread position: 78-381
Cow position: chr3:77226965-77227268 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 105, 47

Conread position: 78-382
Cow position: chr3:54782368-54782071 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 66

Conread position: 78-384
Cow position: chr3:21341320-21341013 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 90

Conread position: 78-385
Cow position: chr3:31047299-31047001 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 106

Conread position: 78-385
Cow position: chr3:58951264-58951565 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 168

Conread position: 78-390
Cow position: chr3:66610195-66609887 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 152

Conread position: 78-391
Cow position: chr3:54959841-54960143 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 30

Conread position: 78-398
Cow position: chr3:80082174-80081860 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 175

Conread position: 78-398
Cow position: chr3:82460815-82461145 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 30

Conread position: 78-420
Cow position: chr3:16004341-16004004 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 78-493
Cow position: chr3:10346990-10347438 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 184

Conread position: 78-493
Cow position: chr3:59798897-59799331 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 162

Conread position: 78-503
Cow position: chr3:29887781-29887327 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 162

Conread position: 78-522
Cow position: chr3:48296354-48296807 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 179

Conread position: 78-526
Cow position: chr3:5101117-5100653 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 78-527
Cow position: chr3:59691547-59692006 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 168

Conread position: 78-529
Cow position: chr3:37486145-37485679 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 307
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 77, 61

Conread position: 78-539
Cow position: chr3:80581319-80581784 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 27

Conread position: 78-541
Cow position: chr3:73708702-73709174 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 54

Conread position: 78-578
Cow position: chr3:49218664-49218158 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 136

Conread position: 78-584
Cow position: chr3:2537900-2538410 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 60

Conread position: 78-586
Cow position: chr3:53221671-53222187 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 42

Conread position: 78-586
Cow position: chr3:68302971-68303493 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 252

Conread position: 78-588
Cow position: chr3:2630438-2630937 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 78-588
Cow position: chr3:7661532-7662035 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 191

Conread position: 78-589
Cow position: chr3:2674672-2675210 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 176

Conread position: 78-591
Cow position: chr3:48241264-48241786 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 166

Conread position: 78-593
Cow position: chr3:22676436-22675924 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 61

Conread position: 78-594
Cow position: chr3:71231049-71231581 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 161

Conread position: 78-595
Cow position: chr3:5365328-5365849 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 351
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 100

Conread position: 78-597
Cow position: chr3:20663895-20663357 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 347

Conread position: 78-604
Cow position: chr3:18393740-18393207 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 9

Conread position: 78-604
Cow position: chr3:76173019-76172489 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 133

Conread position: 78-606
Cow position: chr3:59630857-59630310 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 177

Conread position: 78-606
Cow position: chr3:80564604-80565159 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 37

Conread position: 78-612
Cow position: chr3:18066777-18067330 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 170

Conread position: 79-351
Cow position: chr3:9116554-9116817 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 98, 65

Conread position: 79-394
Cow position: chr3:26920543-26920866 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 79-582
Cow position: chr3:53149970-53150504 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 168

Conread position: 79-607
Cow position: chr3:53429244-53428721 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 60

Conread position: 79-608
Cow position: chr3:1830921-1830373 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 48

Conread position: 80-335
Cow position: chr3:65019977-65020234 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 193

Conread position: 80-596
Cow position: chr3:47284485-47284986 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 80-620
Cow position: chr3:68586686-68587228 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 354
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 101, 59

Conread position: 83-377
Cow position: chr3:15081091-15080804 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 182

Conread position: 83-377
Cow position: chr3:17222502-17222204 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 83-381
Cow position: chr3:14466056-14465768 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 136

Conread position: 83-385
Cow position: chr3:65413639-65413331 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 152

Conread position: 83-385
Cow position: chr3:79208343-79208048 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 71

Conread position: 83-596
Cow position: chr3:83442231-83441707 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 125

Conread position: 83-603
Cow position: chr3:61225086-61224556 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 45

Conread position: 83-607
Cow position: chr3:59604519-59605037 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 154

Conread position: 84-598
Cow position: chr3:14552528-14553058 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 33

Conread position: 85-385
Cow position: chr3:71497496-71497191 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 188

Conread position: 87-380
Cow position: chr3:31903456-31903169 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 250, 139

Conread position: 87-523
Cow position: chr3:69962057-69961624 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 87-582
Cow position: chr3:70895699-70896210 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 87-593
Cow position: chr3:45881561-45882081 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 91-349
Cow position: chr3:61467273-61467521 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 91-381
Cow position: chr3:79292491-79292774 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 56

Conread position: 92-598
Cow position: chr3:83474406-83474941 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 156

Conread position: 93-382
Cow position: chr3:80071775-80072073 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 93-591
Cow position: chr3:2393314-2392789 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 183

Conread position: 96-380
Cow position: chr3:55272379-55272102 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 98-382
Cow position: chr3:22924739-22924461 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 276, 43

Conread position: 99-594
Cow position: chr3:15052278-15051767 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 353
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 87

Conread position: 101-597
Cow position: chr3:78076858-78077375 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 36

Conread position: 105-622
Cow position: chr3:54903244-54903782 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 5

Conread position: 106-375
Cow position: chr3:55970178-55970446 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 74

Conread position: 107-596
Cow position: chr3:2397111-2396610 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 247

Conread position: 108-559
Cow position: chr3:74600792-74601257 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 336
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 26

Conread position: 120-604
Cow position: chr3:29812930-29813419 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 121-332
Cow position: chr3:78200953-78201166 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 123-374
Cow position: chr3:53112856-53113112 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 123-598
Cow position: chr3:53790856-53790355 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 403

Conread position: 125-415
Cow position: chr3:23417175-23416891 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 57

Conread position: 128-382
Cow position: chr3:67704229-67704489 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 145

Conread position: 129-603
Cow position: chr3:27274233-27274719 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 132-606
Cow position: chr3:53909811-53910299 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 135-380
Cow position: chr3:66292477-66292235 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 13

Conread position: 135-598
Cow position: chr3:82020149-82019655 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 395

Conread position: 138-525
Cow position: chr3:59208517-59208908 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 138-602
Cow position: chr3:53739488-53738992 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 281

Conread position: 141-529
Cow position: chr3:19006373-19006775 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 122

Conread position: 141-615
Cow position: chr3:73764487-73764010 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 40

Conread position: 143-349
Cow position: chr3:34392389-34392183 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 128

Conread position: 143-381
Cow position: chr3:45534591-45534351 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 143-381
Cow position: chr3:45647845-45648077 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 113

Conread position: 143-385
Cow position: chr3:44623189-44622935 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 109, 98

Conread position: 143-510
Cow position: chr3:73443379-73442997 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 111

Conread position: 143-600
Cow position: chr3:68881401-68880943 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 40

Conread position: 143-602
Cow position: chr3:9641272-9641745 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 101

Conread position: 143-607
Cow position: chr3:3985038-3985512 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 333
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 34, 113

Conread position: 144-522
Cow position: chr3:56059516-56059918 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 100

Conread position: 145-385
Cow position: chr3:17895564-17895792 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 85

Conread position: 145-390
Cow position: chr3:5096913-5097161 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 111

Conread position: 145-390
Cow position: chr3:58130710-58130951 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 158

Conread position: 145-588
Cow position: chr3:13330062-13329616 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 317
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 100

Conread position: 145-597
Cow position: chr3:22221066-22221511 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 304
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 26

Conread position: 145-598
Cow position: chr3:15158751-15159218 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 145-600
Cow position: chr3:68708291-68707834 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 36

Conread position: 145-614
Cow position: chr3:78946129-78945619 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 68

Conread position: 147-385
Cow position: chr3:39970160-39969915 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 147-642
Cow position: chr3:64281224-64280710 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 367

Conread position: 148-618
Cow position: chr3:83455435-83454950 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 328
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 216, 24

Conread position: 150-380
Cow position: chr3:19789404-19789170 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 150-592
Cow position: chr3:5374051-5374490 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 5

Conread position: 151-380
Cow position: chr3:49140331-49140097 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 25

Conread position: 151-395
Cow position: chr3:18497741-18497974 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 30

Conread position: 152-382
Cow position: chr3:39171767-39171536 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 112

Conread position: 153-611
Cow position: chr3:26682075-26681620 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 121

Conread position: 154-385
Cow position: chr3:81277985-81277748 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 155-380
Cow position: chr3:38863833-38864060 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 103

Conread position: 155-574
Cow position: chr3:53046937-53046495 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 155-591
Cow position: chr3:49482984-49482534 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 155-599
Cow position: chr3:57763943-57764401 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 350

Conread position: 155-616
Cow position: chr3:75158085-75158561 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 330
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 84

Conread position: 156-331
Cow position: chr3:61262524-61262698 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 90

Conread position: 156-376
Cow position: chr3:49731916-49731700 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 89

Conread position: 156-607
Cow position: chr3:78443842-78443370 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 337

Conread position: 157-573
Cow position: chr3:68627953-68627525 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 157-586
Cow position: chr3:32584880-32585328 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 158-586
Cow position: chr3:23408619-23408189 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 159-385
Cow position: chr3:5899550-5899774 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 48

Conread position: 159-582
Cow position: chr3:6873521-6873100 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 75

Conread position: 161-610
Cow position: chr3:54945851-54946320 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 241

Conread position: 162-390
Cow position: chr3:525081-525298 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 84

Conread position: 165-385
Cow position: chr3:74611292-74611514 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 98

Conread position: 165-526
Cow position: chr3:70899630-70900007 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 94

Conread position: 166-381
Cow position: chr3:7366142-7365938 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 168-377
Cow position: chr3:17451201-17451000 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 146

Conread position: 168-594
Cow position: chr3:22716548-22716094 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 170-362
Cow position: chr3:55970960-55971153 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 100

Conread position: 171-544
Cow position: chr3:73460715-73461095 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 159

Conread position: 175-605
Cow position: chr3:7331375-7330943 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 286

Conread position: 175-609
Cow position: chr3:3556286-3556747 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 176-336
Cow position: chr3:56523758-56523604 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 176-381
Cow position: chr3:22820312-22820514 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 160, 62

Conread position: 176-383
Cow position: chr3:45279200-45279408 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 167

Conread position: 176-385
Cow position: chr3:8604271-8604064 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 68

Conread position: 176-385
Cow position: chr3:71237900-71238106 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 161, 35

Conread position: 176-518
Cow position: chr3:61143836-61144201 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 188

Conread position: 176-611
Cow position: chr3:52607926-52608374 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 161

Conread position: 176-614
Cow position: chr3:45307677-45308113 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 256, 125

Conread position: 177-588
Cow position: chr3:18686660-18687078 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 297
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 161, 51

Conread position: 178-526
Cow position: chr3:48578586-48578919 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 235, 41

Conread position: 178-605
Cow position: chr3:26970570-26971005 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 66

Conread position: 180-589
Cow position: chr3:5045063-5044632 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 333

Conread position: 181-384
Cow position: chr3:34937589-34937792 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 14

Conread position: 181-580
Cow position: chr3:25754784-25755204 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 191, 89

Conread position: 182-423
Cow position: chr3:11711702-11711952 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 29

Conread position: 182-619
Cow position: chr3:52652325-52651869 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 190, 70

Conread position: 184-591
Cow position: chr3:44932259-44932692 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 235

Conread position: 185-601
Cow position: chr3:15752876-15752447 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 151, 57

Conread position: 190-357
Cow position: chr3:35074438-35074605 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 43

Conread position: 190-583
Cow position: chr3:77006262-77006643 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 221, 64

Conread position: 191-377
Cow position: chr3:55836071-55835882 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 146, 0

Conread position: 191-617
Cow position: chr3:12705801-12705340 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 315
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 275

Conread position: 193-394
Cow position: chr3:83201768-83201568 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 144, 162

Conread position: 194-382
Cow position: chr3:8060893-8061072 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 142, 44

Conread position: 195-345
Cow position: chr3:4861451-4861597 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 198-523
Cow position: chr3:17447843-17447501 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 54

Conread position: 199-598
Cow position: chr3:68156496-68156917 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 201-344
Cow position: chr3:21547334-21547188 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 206-393
Cow position: chr3:15506220-15506404 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 172, 131

Conread position: 208-394
Cow position: chr3:74134480-74134658 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 208-455
Cow position: chr3:56301573-56301313 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 128, 211

Conread position: 209-605
Cow position: chr3:53084176-53083790 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 203, 43

Conread position: 219-340
Cow position: chr3:5082856-5082733 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 219-385
Cow position: chr3:70609408-70609574 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 219-593
Cow position: chr3:11063164-11063544 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 118

Conread position: 219-617
Cow position: chr3:20842074-20841671 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 275
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 284

Conread position: 234-336
Cow position: chr3:14801033-14800931 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 234-607
Cow position: chr3:38828563-38828947 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 250

Conread position: 237-405
Cow position: chr3:77665976-77665812 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 237-603
Cow position: chr3:30940620-30940999 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 33

Conread position: 239-379
Cow position: chr3:45221899-45221759 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 239-607
Cow position: chr3:74754130-74754513 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 152, 93

Conread position: 240-380
Cow position: chr3:63269028-63269167 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 49

Conread position: 244-383
Cow position: chr3:23105559-23105418 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 244-574
Cow position: chr3:74079832-74079475 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 278

Conread position: 244-586
Cow position: chr3:6182393-6182058 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 103

Conread position: 244-614
Cow position: chr3:57273873-57274263 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 119

Conread position: 247-599
Cow position: chr3:59596995-59597362 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 30

Conread position: 249-595
Cow position: chr3:61322660-61323003 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 22

Conread position: 251-390
Cow position: chr3:7940742-7940602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 123

Conread position: 251-607
Cow position: chr3:22232838-22232472 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 112

Conread position: 252-514
Cow position: chr3:20678020-20677739 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 277

Conread position: 253-512
Cow position: chr3:60265426-60265151 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 253-590
Cow position: chr3:54506525-54506886 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 85

Conread position: 258-586
Cow position: chr3:70762302-70761948 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 263

Conread position: 258-612
Cow position: chr3:76922842-76922474 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 264

Conread position: 258-619
Cow position: chr3:75107615-75107977 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 79

Conread position: 259-591
Cow position: chr3:36418644-36418307 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 65

Conread position: 260-379
Cow position: chr3:62046485-62046604 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 262-384
Cow position: chr3:26874415-26874542 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 19

Conread position: 270-384
Cow position: chr3:34294452-34294336 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 270-609
Cow position: chr3:54100890-54100516 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 356

Conread position: 271-584
Cow position: chr3:68616491-68616162 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 101, 246

Conread position: 272-593
Cow position: chr3:48073039-48072704 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 99, 44

Conread position: 273-602
Cow position: chr3:60264879-60264531 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 28

Conread position: 274-607
Cow position: chr3:81087785-81087444 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 70

Conread position: 276-526
Cow position: chr3:53508460-53508726 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 235

Conread position: 277-385
Cow position: chr3:74242835-74242943 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 280-598
Cow position: chr3:24468536-24468197 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 237

Conread position: 280-617
Cow position: chr3:19585704-19586069 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 57, 243

Conread position: 288-590
Cow position: chr3:79196610-79196941 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 325

Conread position: 291-585
Cow position: chr3:3883965-3883646 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 203

Conread position: 291-591
Cow position: chr3:10372134-10372436 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 10

Conread position: 292-639
Cow position: chr3:75105230-75104888 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 16

Conread position: 293-584
Cow position: chr3:78093528-78093220 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 225

Conread position: 294-606
Cow position: chr3:76155844-76156181 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 229

Conread position: 296-613
Cow position: chr3:47417707-47417368 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 196

Conread position: 297-591
Cow position: chr3:18426840-18426519 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 224

Conread position: 309-611
Cow position: chr3:57641702-57642003 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 69

Conread position: 314-607
Cow position: chr3:48468059-48468370 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 197

Conread position: 318-597
Cow position: chr3:15951031-15950731 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 200

Conread position: 321-502
Cow position: chr3:20333914-20334101 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 26

Conread position: 335-601
Cow position: chr3:44961090-44960827 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 67

Conread position: 356-587
Cow position: chr3:23132231-23131992 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 8

Conread position: 360-597
Cow position: chr3:19709050-19709289 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 104

Conread position: 360-603
Cow position: chr3:1011428-1011683 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 131

Conread position: 366-586
Cow position: chr3:59610771-59610544 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 138

Conread position: 369-585
Cow position: chr3:8349615-8349397 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 131

Conread position: 370-523
Cow position: chr3:26874547-26874703 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 370-581
Cow position: chr3:10668928-10668709 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 133

Conread position: 370-597
Cow position: chr3:68004751-68004522 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 134

Conread position: 370-602
Cow position: chr3:3946989-3947226 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 134

Conread position: 370-604
Cow position: chr3:73335235-73335471 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 27

Conread position: 371-606
Cow position: chr3:33002341-33002580 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 17

Conread position: 373-601
Cow position: chr3:76269846-76270078 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 93

Conread position: 374-607
Cow position: chr3:49363066-49363301 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 5

Conread position: 380-504
Cow position: chr3:41652338-41652469 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 121

Conread position: 380-514
Cow position: chr3:50593950-50593811 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 380-550
Cow position: chr3:32409174-32409356 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 380-559
Cow position: chr3:16505513-16505339 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 119

Conread position: 380-586
Cow position: chr3:9120807-9121017 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 132

Conread position: 380-587
Cow position: chr3:39969901-39969687 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 125

Conread position: 380-596
Cow position: chr3:31350142-31349925 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 118

Conread position: 380-597
Cow position: chr3:19682657-19682893 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 380-597
Cow position: chr3:23105400-23105178 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 123

Conread position: 380-601
Cow position: chr3:59919994-59920233 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 380-607
Cow position: chr3:47753188-47753433 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 380-607
Cow position: chr3:75966819-75966586 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 136

Conread position: 380-607
Cow position: chr3:80072091-80072340 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 380-611
Cow position: chr3:17331692-17331919 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 31

Conread position: 380-614
Cow position: chr3:22165453-22165214 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 119

Conread position: 380-618
Cow position: chr3:59299536-59299779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 120

Conread position: 381-578
Cow position: chr3:17222179-17221966 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 381-588
Cow position: chr3:74644520-74644737 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 134

Conread position: 381-595
Cow position: chr3:8061092-8061304 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 118

Conread position: 381-604
Cow position: chr3:59933334-59933574 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 101

Conread position: 381-605
Cow position: chr3:55177783-55177558 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 122

Conread position: 383-530
Cow position: chr3:15173046-15173202 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 388-586
Cow position: chr3:70609602-70609800 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 48

Conread position: 388-597
Cow position: chr3:73421523-73421297 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 103

Conread position: 388-598
Cow position: chr3:4548997-4549204 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 114

Conread position: 388-606
Cow position: chr3:3316845-3316610 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 29, 55

Conread position: 388-607
Cow position: chr3:64196796-64197021 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 117

Conread position: 389-580
Cow position: chr3:9116998-9117203 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 111

Conread position: 390-607
Cow position: chr3:49344672-49344889 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 108

Conread position: 391-598
Cow position: chr3:46259688-46259899 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 86

Conread position: 392-596
Cow position: chr3:62186132-62186343 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 392-598
Cow position: chr3:67407392-67407180 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 112

Conread position: 393-591
Cow position: chr3:71474422-71474227 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 100

Conread position: 394-598
Cow position: chr3:19788854-19788653 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 109

Conread position: 397-586
Cow position: chr3:73701483-73701673 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 109

Conread position: 398-607
Cow position: chr3:27083056-27082844 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 77

Conread position: 399-588
Cow position: chr3:16107378-16107198 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 399-607
Cow position: chr3:42589088-42589293 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 402-587
Cow position: chr3:77098829-77098648 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 156, 17

Conread position: 402-588
Cow position: chr3:60186137-60186330 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 12

Conread position: 402-597
Cow position: chr3:54782012-54781807 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 80

Conread position: 403-590
Cow position: chr3:562800-562610 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 23

Conread position: 406-602
Cow position: chr3:3262839-3262633 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 200

Conread position: 406-602
Cow position: chr3:12090666-12090868 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 49

Conread position: 406-615
Cow position: chr3:4071775-4071565 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 55

Conread position: 406-644
Cow position: chr3:65022289-65022537 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 407-524
Cow position: chr3:28556166-28556048 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 88

Conread position: 407-574
Cow position: chr3:73820373-73820202 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 407-584
Cow position: chr3:83988529-83988707 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 46

Conread position: 407-586
Cow position: chr3:8523155-8522979 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 118, 20

Conread position: 407-586
Cow position: chr3:37041415-37041591 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 87

Conread position: 407-586
Cow position: chr3:56476678-56476849 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 89

Conread position: 407-586
Cow position: chr3:61024027-61023846 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 87

Conread position: 407-591
Cow position: chr3:35055978-35055796 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 71

Conread position: 407-591
Cow position: chr3:41366714-41366520 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 87

Conread position: 407-591
Cow position: chr3:59474118-59474300 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 87

Conread position: 407-593
Cow position: chr3:28897026-28896839 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 60

Conread position: 407-596
Cow position: chr3:37641321-37641511 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 88

Conread position: 407-597
Cow position: chr3:75050621-75050437 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 29

Conread position: 407-598
Cow position: chr3:15859383-15859195 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 69

Conread position: 407-598
Cow position: chr3:15973562-15973759 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 407-598
Cow position: chr3:35074874-35075058 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 85

Conread position: 407-598
Cow position: chr3:48483174-48483363 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 90

Conread position: 407-598
Cow position: chr3:59947661-59947855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 75

Conread position: 407-598
Cow position: chr3:78071795-78071605 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 75

Conread position: 407-599
Cow position: chr3:210315-210512 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 90

Conread position: 407-599
Cow position: chr3:55730473-55730278 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 87

Conread position: 407-599
Cow position: chr3:80958515-80958321 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 31

Conread position: 407-600
Cow position: chr3:48459333-48459141 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 75

Conread position: 407-602
Cow position: chr3:3164114-3163924 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 75

Conread position: 407-604
Cow position: chr3:30180082-30180276 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 75

Conread position: 407-604
Cow position: chr3:76168636-76168435 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 90

Conread position: 407-605
Cow position: chr3:15153687-15153883 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 89

Conread position: 407-605
Cow position: chr3:17058550-17058353 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 87

Conread position: 407-605
Cow position: chr3:66631356-66631150 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 104

Conread position: 407-605
Cow position: chr3:69650893-69650702 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 87

Conread position: 407-606
Cow position: chr3:2025194-2025398 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 68

Conread position: 407-606
Cow position: chr3:63860615-63860418 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 89

Conread position: 407-607
Cow position: chr3:19792901-19793092 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 51

Conread position: 407-607
Cow position: chr3:27976528-27976332 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 68

Conread position: 407-607
Cow position: chr3:41863621-41863818 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 89

Conread position: 407-607
Cow position: chr3:82425085-82424886 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 6, 91

Conread position: 407-609
Cow position: chr3:43389132-43388927 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 102

Conread position: 407-611
Cow position: chr3:79893502-79893295 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 87

Conread position: 407-614
Cow position: chr3:55970503-55970719 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 75

Conread position: 407-614
Cow position: chr3:84137819-84137612 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 86

Conread position: 407-615
Cow position: chr3:54067790-54068004 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 68

Conread position: 407-619
Cow position: chr3:84807332-84807116 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 87

Conread position: 407-621
Cow position: chr3:42434334-42434115 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 68

Conread position: 407-625
Cow position: chr3:26338024-26337802 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 102

Conread position: 407-639
Cow position: chr3:70402640-70402870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 38

Conread position: 408-598
Cow position: chr3:32248008-32248196 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 67

Conread position: 410-536
Cow position: chr3:6040447-6040571 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 87

Conread position: 410-596
Cow position: chr3:56943928-56943745 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 87

Conread position: 410-606
Cow position: chr3:83325212-83325403 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 112

Conread position: 410-607
Cow position: chr3:44782337-44782535 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 9, 82

Conread position: 410-607
Cow position: chr3:66120708-66120898 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 79

Conread position: 410-612
Cow position: chr3:31896957-31896766 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 411-586
Cow position: chr3:26393299-26393124 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 7

Conread position: 411-591
Cow position: chr3:63069366-63069181 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 83

Conread position: 413-583
Cow position: chr3:20021271-20021440 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 83

Conread position: 413-588
Cow position: chr3:2506476-2506299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 40

Conread position: 413-608
Cow position: chr3:34164282-34164088 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 143, 8

Conread position: 414-559
Cow position: chr3:56704318-56704165 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 414-577
Cow position: chr3:62370058-62370223 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 23

Conread position: 414-580
Cow position: chr3:6579487-6579649 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 45

Conread position: 414-591
Cow position: chr3:7581714-7581538 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 53

Conread position: 414-591
Cow position: chr3:18059706-18059884 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 91

Conread position: 414-591
Cow position: chr3:23804508-23804683 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 83

Conread position: 414-592
Cow position: chr3:76267972-76267793 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 80

Conread position: 414-597
Cow position: chr3:77653931-77654106 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 82

Conread position: 414-603
Cow position: chr3:2016438-2016624 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 80

Conread position: 414-603
Cow position: chr3:21694227-21694418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 122

Conread position: 414-603
Cow position: chr3:49996718-49996525 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 414-603
Cow position: chr3:51609183-51608990 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 78

Conread position: 414-603
Cow position: chr3:68648177-68648368 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 68

Conread position: 414-604
Cow position: chr3:62046667-62046865 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 414-605
Cow position: chr3:76056282-76056096 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 82

Conread position: 414-606
Cow position: chr3:15160523-15160713 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 82

Conread position: 414-607
Cow position: chr3:31352872-31352687 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 80

Conread position: 414-607
Cow position: chr3:56949085-56948900 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 83

Conread position: 414-607
Cow position: chr3:81616450-81616254 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 95

Conread position: 414-607
Cow position: chr3:83934728-83934920 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 82

Conread position: 414-608
Cow position: chr3:45211304-45211502 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 414-612
Cow position: chr3:15388222-15388417 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 68

Conread position: 414-614
Cow position: chr3:45314347-45314556 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 414-614
Cow position: chr3:65969170-65969377 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 414-614
Cow position: chr3:70319802-70319595 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 195

Conread position: 414-620
Cow position: chr3:55094227-55094021 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 40

Conread position: 414-629
Cow position: chr3:35624542-35624323 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 61

Conread position: 414-633
Cow position: chr3:44959945-44960165 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 80

Conread position: 415-580
Cow position: chr3:75238461-75238630 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 92

Conread position: 415-589
Cow position: chr3:15443725-15443548 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 79

Conread position: 415-591
Cow position: chr3:77365286-77365112 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 79

Conread position: 415-591
Cow position: chr3:83705533-83705355 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 59

Conread position: 415-598
Cow position: chr3:11281770-11281956 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 67

Conread position: 415-601
Cow position: chr3:11229361-11229181 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 82

Conread position: 415-601
Cow position: chr3:31309350-31309164 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 82

Conread position: 415-603
Cow position: chr3:21959663-21959857 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 124

Conread position: 415-603
Cow position: chr3:51150132-51150322 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 153

Conread position: 415-605
Cow position: chr3:53875761-53875568 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 79

Conread position: 415-606
Cow position: chr3:18700107-18699911 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 79

Conread position: 415-607
Cow position: chr3:51033370-51033567 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 175

Conread position: 415-641
Cow position: chr3:73589767-73589540 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 180

Conread position: 416-586
Cow position: chr3:77002718-77002901 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 416-587
Cow position: chr3:31361430-31361599 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 78

Conread position: 416-588
Cow position: chr3:23037504-23037331 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 73

Conread position: 416-591
Cow position: chr3:1037027-1037208 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 416-594
Cow position: chr3:47199122-47198943 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 78

Conread position: 416-597
Cow position: chr3:5305803-5305990 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 147

Conread position: 416-599
Cow position: chr3:17531733-17531549 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 82

Conread position: 416-603
Cow position: chr3:26977539-26977729 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 86

Conread position: 416-604
Cow position: chr3:69785619-69785427 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 82

Conread position: 416-605
Cow position: chr3:41510581-41510773 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 82

Conread position: 416-606
Cow position: chr3:55318892-55318701 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 59

Conread position: 416-607
Cow position: chr3:22924370-22924185 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 80

Conread position: 416-607
Cow position: chr3:24774658-24774840 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 65

Conread position: 416-607
Cow position: chr3:57704341-57704527 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 144, 17

Conread position: 416-608
Cow position: chr3:74050697-74050511 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 80

Conread position: 416-614
Cow position: chr3:4461479-4461286 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 88

Conread position: 417-559
Cow position: chr3:5737757-5737891 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 37

Conread position: 417-589
Cow position: chr3:52845562-52845733 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 79

Conread position: 417-593
Cow position: chr3:4518177-4518002 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 80

Conread position: 417-596
Cow position: chr3:39812053-39812243 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 185

Conread position: 417-603
Cow position: chr3:19611346-19611159 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 79

Conread position: 417-603
Cow position: chr3:68094150-68094344 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 417-644
Cow position: chr3:621441-621675 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 205

Conread position: 418-586
Cow position: chr3:29234674-29234503 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 418-588
Cow position: chr3:43896053-43895886 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 74

Conread position: 418-596
Cow position: chr3:48900326-48900143 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 76

Conread position: 418-605
Cow position: chr3:44594627-44594817 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 78

Conread position: 419-577
Cow position: chr3:26603543-26603380 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 420-574
Cow position: chr3:10115307-10115458 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 37

Conread position: 421-603
Cow position: chr3:76300782-76300966 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 137, 71

Conread position: 421-624
Cow position: chr3:19641068-19641278 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 176

Conread position: 422-614
Cow position: chr3:66885019-66884827 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 74

Conread position: 423-594
Cow position: chr3:40958115-40957944 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 73

Conread position: 423-607
Cow position: chr3:68624229-68624415 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 71

Conread position: 423-614
Cow position: chr3:2637939-2638134 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 167

Conread position: 424-608
Cow position: chr3:79398155-79398342 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 84

Conread position: 425-598
Cow position: chr3:78783103-78783288 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 172

Conread position: 426-526
Cow position: chr3:20719294-20719193 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 426-536
Cow position: chr3:5850678-5850570 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 426-603
Cow position: chr3:44724877-44725060 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 68

Conread position: 426-607
Cow position: chr3:83215278-83215467 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 426-613
Cow position: chr3:16710785-16710594 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 56

Conread position: 426-624
Cow position: chr3:49787574-49787769 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 69

Conread position: 427-586
Cow position: chr3:44218782-44218943 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 66

Conread position: 428-586
Cow position: chr3:22868702-22868541 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 65

Conread position: 428-588
Cow position: chr3:18471319-18471480 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 68

Conread position: 428-607
Cow position: chr3:68565839-68566007 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 429-589
Cow position: chr3:2636968-2637123 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 66

Conread position: 429-607
Cow position: chr3:63332983-63333166 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 41

Conread position: 430-585
Cow position: chr3:39996868-39996720 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 128, 65

Conread position: 430-586
Cow position: chr3:25702322-25702156 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 430-592
Cow position: chr3:20911390-20911230 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 430-597
Cow position: chr3:72342265-72342434 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 63

Conread position: 430-598
Cow position: chr3:18479278-18479109 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 130, 31

Conread position: 430-598
Cow position: chr3:64910076-64909908 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 59

Conread position: 430-600
Cow position: chr3:3453599-3453771 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 66

Conread position: 430-601
Cow position: chr3:40213014-40212844 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 44

Conread position: 430-603
Cow position: chr3:11027294-11027467 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 43

Conread position: 430-603
Cow position: chr3:78258735-78258558 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 43

Conread position: 430-604
Cow position: chr3:42483946-42484121 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 68

Conread position: 430-607
Cow position: chr3:14801764-14801939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 430-607
Cow position: chr3:58527402-58527573 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 65

Conread position: 430-608
Cow position: chr3:23203211-23203034 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 28

Conread position: 430-611
Cow position: chr3:23920409-23920224 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 128, 63

Conread position: 430-614
Cow position: chr3:3011166-3011347 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 430-617
Cow position: chr3:84250812-84250615 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 49

Conread position: 430-619
Cow position: chr3:27286538-27286725 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 65

Conread position: 431-587
Cow position: chr3:22078096-22078254 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 62

Conread position: 431-591
Cow position: chr3:29807762-29807913 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 64

Conread position: 431-601
Cow position: chr3:18764122-18764295 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 431-601
Cow position: chr3:55106128-55105955 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 62

Conread position: 431-607
Cow position: chr3:79272552-79272381 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 61

Conread position: 432-639
Cow position: chr3:74127487-74127271 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 182

Conread position: 432-641
Cow position: chr3:3656536-3656745 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 62

Conread position: 434-617
Cow position: chr3:32436659-32436841 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 55

Conread position: 435-598
Cow position: chr3:75907936-75908097 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 62

Conread position: 438-602
Cow position: chr3:8540535-8540693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 55

Conread position: 443-599
Cow position: chr3:24370434-24370580 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 53

Conread position: 444-571
Cow position: chr3:25289878-25290003 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 52

Conread position: 447-601
Cow position: chr3:39967452-39967306 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 451-591
Cow position: chr3:39902473-39902331 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 54

Conread position: 452-593
Cow position: chr3:21081344-21081198 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 458-606
Cow position: chr3:42933528-42933678 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 38

Conread position: 465-615
Cow position: chr3:3877339-3877195 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 31

Conread position: 469-610
Cow position: chr3:76891845-76891984 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 96

Show alignments to all cow chromosomes.