Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               131, 72
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 198
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 200
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 6
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               70, 160
               

               Conread position:
               9-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               24-274
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               49-266
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 152
               

               Conread position:
               252-448
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               115, 7
               

               Conread position:
               252-479
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               192, 7
               

               Conread position:
               261-426
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               279-402
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-404
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               279-443
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               90, 124
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 85
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 124
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 125
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               91, 138
               

               Conread position:
               279-488
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               283-448
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               346-618
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               346-620
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 176
               

               Conread position:
               354-614
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 172
               

               Conread position:
               354-620
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               355-620
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               360-620
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               360-620
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               389-620
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               391-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               392-620
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               188, 46
               

               Conread position:
               396-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               397-613
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 204
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               112, 14
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               185, 93
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 24
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               184, 117
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 51
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               398-615
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 39
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               171, 49
               

               Conread position:
               402-620
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               408-620
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               409-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               410-619
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               410-619
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               136, 38
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               411-616
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               170, 117
               

               Conread position:
               411-616
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               170, 117
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               170, 37
               

               Conread position:
               412-620
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               37, 179
               

               Conread position:
               414-610
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               415-619
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               418-620
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               157, 96
               

               Conread position:
               419-618
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               150, 108
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               150, 17
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               436-616
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               438-620
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               440-619
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               130, 79
               

               Conread position:
               441-620
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 78
               

               Conread position:
               448-620
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               448-620
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               455-616
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               459-619
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               461-620
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               120, 140
               

               Conread position:
               465-620
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               116, 49
               

               Conread position:
               486-616
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 33
               
Show alignments to all cow chromosomes.