Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               134, 199
               

               Conread position:
               6-296
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               105, 5
               

               Conread position:
               6-300
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               127, 5
               

               Conread position:
               36-275
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               252-451
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 165
               

               Conread position:
               269-448
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               279-427
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 124
               

               Conread position:
               279-427
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               279-428
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               279-445
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 107
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               283-432
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 134
               

               Conread position:
               346-619
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 177
               

               Conread position:
               358-620
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               379-620
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               384-620
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               393-609
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               393-619
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 140
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 148
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               176, 13
               

               Conread position:
               398-619
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 115
               

               Conread position:
               404-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               405-620
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               407-619
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               410-616
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               171, 46
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 37
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               170, 28
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               418-617
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               143, 17
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               160, 90
               

               Conread position:
               422-619
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 167
               

               Conread position:
               423-616
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               428-616
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               431-618
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               432-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               436-618
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               145, 12
               

               Conread position:
               442-619
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 79
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               451-620
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               131, 5
               

               Conread position:
               458-620
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               461-620
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               461-620
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 115
               

               Conread position:
               462-619
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               474-616
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               108, 94
               

               Conread position:
               485-620
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               487-620
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               488-619
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.