Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               21-274
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               31-275
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 181
               

               Conread position:
               279-416
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-432
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               279-487
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               282-404
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               283-448
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               355-620
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 24
               

               Conread position:
               392-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 126
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               172, 119
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               23, 134
               

               Conread position:
               396-620
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               397-610
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               128, 124
               

               Conread position:
               397-612
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               184, 176
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               170, 134
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 122
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 101
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 117
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 110
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               175, 20
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               400-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               401-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 112
               

               Conread position:
               401-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               180, 50
               

               Conread position:
               401-620
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               402-620
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 127
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               160, 107
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               411-618
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               411-619
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               159, 27
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               37, 99
               

               Conread position:
               415-619
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               418-610
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               420-617
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               425-619
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               429-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               436-616
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               443-620
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               138, 84
               

               Conread position:
               443-620
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               462-620
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               471-620
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               504-619
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.