Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 201
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 196
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 173
               

               Conread position:
               268-405
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 12
               

               Conread position:
               279-403
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 140
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               91, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 138
               

               Conread position:
               279-449
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               282-403
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 118
               

               Conread position:
               351-620
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               230, 12
               

               Conread position:
               354-619
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 178
               

               Conread position:
               354-620
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               396-610
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 103
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               184, 72
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 108
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               398-608
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               398-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 117
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               175, 58
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               399-619
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               184, 30
               

               Conread position:
               405-618
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               411-612
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               416-619
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               419-619
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               151, 28
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 73
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 131
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               436-614
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               122, 93
               

               Conread position:
               445-616
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               456-620
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               458-620
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 58
               

               Conread position:
               461-620
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               462-620
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 82
               

               Conread position:
               465-620
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               472-620
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               479-617
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 0
               
Show alignments to all cow chromosomes.